Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00001060-protein ID=TCONS_00001060-protein|Name=TCONS_00001060-protein|organism=Clytia hemisphaerica|type=polypeptide|length=877bp MADTAEDFKMTDDEARRIKQALKDKEFMDLLVEYAKEISDPENKKKYEEE IVAMERQRGQDVRLLKPQSGFVIKTVRLSDNMKVFLNICSSPEVKEYELQ HVKGGANLSLPHSVSPVREDIDKGGKACIVYDVCFNPKSYDKGMKESNFR QSMVDSAFDTIERQMNIKLDRKNKKFPKLKYKGQARPLIIRPEQQSQQKT SPKDDKNSKTEKDSPLDFRYPDIQKENKATEEKTGKDKESEKCTKRTVID EGKPVVPKYKIVHRGFFEMTDYTGGSLSSTTPKELVVEIELPLAKSANGL DLDIFAQQLILDSEKPSYHLDISLPHKVDEDRGKAQFDKSKKVLIVTLPI LKAEPVTMVPNPPSRLVEECVDEKDVIHNGGHSPDSGIDEMCNHHQNDEE DAEVVEDADECVFQPSDLDNAVFETKNFESMPMNAQLPQYSFDQTIESVV VAVKVPNVKVENISLGITHQQVCLSLPQDASDINSPDWSLVIRLDDRYYL EKDDCGFDILPDRMELNLKKKKSELWDRMFIGVSESSLKMEVFLVDATTS GIVEQLKALNVDKLPRAEVGDVEERKVADMERRLEQLLNEEEKSKIDEET YERCSNRDVARLKTESFSEGSDLDYRHVDLMELADDVIDENSPLISPTSN TLNKHHEFAARTNRTLERSMSHDAYHPRLRSILKRSKSDGAANTTDTDDD VIPHRARATTYSDGHTYLSDVENDFSRRRNKSVSFQDEPIVFEFTKMTKW QWKRQELKKAKKKKSKAKNGTSSDQTASSADEEESSAVTSQEEEKLDKPS EEKPPQKHGRKWKKAQKKRNRNNSESRSTEEETEQTNNGQKKDKRKKKNK KNKNQVEDDSSNESKLTLSNPLIFQLD Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term Definition
GO:0005737 cytoplasm
Vocabulary: Biological Process
Term Definition
GO:0070286 axonemal dynein complex assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0070286
axonemal dynein complex assembly
cellular_component
GO:0005737
cytoplasm
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
100 200 300 400 500 600 700 800 Score = Score = Score = Score = Expect = 7.86957E-4 / Score = 37.5687 Expect = 0.014 / Score = 16.3 Score = 9.862 Expect = 1.5E-11 / Score = 43.8 Expect = 5.7E-10 / Score = 38.9 Score = Expect = 6.5E-75 / Score = 252.9 Score = 15.329 Sequence Coil mobidb-lite mobidb-lite mobidb-lite cd00298 PF04969 PS51203 G3DSA:2.60.40.790 G3DSA:2.60.40.790 SSF49764 PF08190 MF_03069
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 570..597
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 183..243
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 683..707
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 759..877
None No IPR available CDD cd00298 ACD_sHsps_p23-like coord: 281..349 e-value: 7.86957E-4 score: 37.5687
IPR007052 CS domain PFAM PF04969 CS coord: 438..476 e-value: 0.014 score: 16.3
IPR007052 CS domain PROSITE PS51203 CS coord: 435..530 score: 9.862
IPR008978 HSP20-like chaperone GENE3D 2.60.40.790 coord: 250..356 e-value: 1.5E-11 score: 43.8
IPR008978 HSP20-like chaperone GENE3D 2.60.40.790 coord: 435..610 e-value: 5.7E-10 score: 38.9
IPR008978 HSP20-like chaperone SUPERFAMILY 49764 HSP20-like chaperones coord: 432..532
IPR012981 PIH1 domain PFAM PF08190 PIH1 coord: 38..350 e-value: 6.5E-75 score: 252.9
IPR034727 Kintoun HAMAP MF_03069 Kintoun coord: 1..877 score: 15.329
Blast
BLAST of TCONS_00001060-protein vs. Swiss-Prot (Human)
Match:
KTU (Protein kintoun OS=Homo sapiens GN=DNAAF2 PE=1 SV=2)
HSP 1 Score: 220.705 bits (561), Expect = 2.059e-60
Identity = 121/359 (33.70%), Postives = 193/359 (53.76%), Query Frame = 0
Query: 2 ADTAEDFKMTDDEARRIKQALKDKEFMDLLVEYAKEISDPENKKKYEEEIVAMERQRGQDVRLLKPQSGFVIKTVRLSDNMKVFLNICSSPEVKEYELQHVKGG-------ANLSLPHSVSPVREDIDKGGKACIVYDVCFNPKSYDKGMKESNFRQSMVDSAFDTIERQMNIKLDRKNKKFPKLKYKGQARPLIIRPEQQSQQKTSPKDDKNSKTEKDSPLDFRYPDIQKENKATEEKTGKDKESEKCTKRTVIDEGKPVVPKYKIVHRGFFEMTDYTGG--SLSSTTPKELVVEIELPLAKSANGLDLDIFAQQLILDSEKPSYHLDISLPHKVDEDRGKAQFDKSKKVLIVTLPIL 351
+ + ED ++ +E +R+ A +D EF + +YA+E++DPEN+++YE EI A+ER+RG +VR + P+ G V++T L + F+N+CS+ V + GG ++ SLP+S++P RE + +VYDV F+P + + FRQ + +A + +E+Q +KLDR+N K K KYKG ++R P D + D P ++YP + + + P P+Y +V R ++ DY S S P ELV+ IELPL +SA L++ + L LDS KP Y L +SLP+ VD+ RGKAQF+K+++ L+VTLP++
Sbjct: 7 SSSLEDLDLSGEEVQRLTSAFQDPEFRRMFSQYAEELTDPENRRRYEAEITALERERGVEVRFVHPEPGHVLRT-SLDGARRCFVNVCSNALVGAPSSRPGSGGDRGAAPGSHWSLPYSLAPGREYAGRSSSRYMVYDVVFHPDALALARRHEGFRQMLDATALEAVEKQFGVKLDRRNAKTLKAKYKGTPEAAVLRTPLPGVIPARP-DGEPKGPLPDFPYPYQYPAAPGPRAPSPPEAAL--------------QPAPTEPRYSVVQRHHVDLQDYRCSRDSAPSPVPHELVITIELPLLRSAEQAALEVTRKLLCLDSRKPDYRLRLSLPYPVDDGRGKAQFNKARRQLVVTLPVV 349
The following BLAST results are available for this feature: