TCONS_00001054-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001054-protein
Unique NameTCONS_00001054-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length611

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001054-protein ID=TCONS_00001054-protein|Name=TCONS_00001054-protein|organism=Clytia hemisphaerica|type=polypeptide|length=611bp
MLRILTFFLCLQNVASFYVPGVAPHEFAEGEEIYPKAVKMTSIKTQLPYD
YYTLAFCEPTKKHYVPENLGEILRGDRIVNTPYKLEAGKKLPCTFLCPSK
KLSGSQSKAFMERIKEDYSIHMIIDNLPAADLREGIKPQHGYKLGFYTTD
NKAILNNHLRMTIKYNKDTEKSVFRVVGFQVEASSISNIKKDSANTCAFP
SNAESKPLIINQGENEVQFSYEVHWEKSEIRWSTRWDTYLQMSNVQVHWF
AIINSIVIVLFLTGLLAMIIIRTLRRDIANYNKDDDLEEALEETGWKLVH
GDVFRPPRYPMILSALVGSGVQVFCMVLITIVFAMLGMLSPASRGSLATA
IIFLYVFMGTFAGYYSARLYKTLKGLHWKRAAFTTGLLFPGIVFSIAFFL
NFFLWGKQSSGAIPFTTMIALFCLWFGISIPLVYLGYFFGYRKAPYTHSV
RTNQIPRQVPDQVWYMHPFIGVLMAGILPFGAVFIELFFILTAIWENQFY
YLFGFLFLVFVILGICCSEIAIVMVYFQLCGEDYHWWWRSFMMSGACAVY
VFLYAIFYFVTKLEIVSVVSGLIYFGYSAIMVFAFWIITGTIGFFATYAF
VRTIYSAVKID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000597XLOC_000597Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001054TCONS_00001054Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004240Nonaspanin (TM9SF)PFAMPF02990EMP70coord: 48..566
e-value: 1.7E-210
score: 700.0

Blast
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BLAST of TCONS_00001054-protein vs. Swiss-Prot (Human)
Match: TM9S4 (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2)

HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0
Identity = 368/632 (58.23%), Postives = 478/632 (75.63%), Query Frame = 0 
Query:    5 LTFFLCLQNVASFYVPGVAPHEFAEGEEIYPKAVKMTSIKTQLPYDYYTLAFCEPTKKHYVPENLGEILRGDRIVNTPYKLEAGKKLPCTFLCPSKK----LSGSQSKAFMERIKEDYSIHMIIDNLPAADLRE--------------GIKPQHGYKLGFYTTDNKAILNNHLRMTIKYNKDT----EKSVFRVVGFQVEASSI--SNIKKDSANTCAFPSNAESKPLIIN-QGENEVQFSYEVHWEKSEIRWSTRWDTYLQMSNVQVHWFAIINSIVIVLFLTGLLAMIIIRTLRRDIANYNKDDDLEEALEETGWKLVHGDVFRPPRYPMILSALVGSGVQVFCMVLITIVFAMLGMLSPASRGSLATAIIFLYVFMGTFAGYYSARLYKTLKGLHWKRAAFTTGLLFPGIVFSIAFFLNFFLWGKQSSGAIPFTTMIALFCLWFGISIPLVYLGYFFGYRKAPYTHSVRTNQIPRQVPDQVWYMHPFIGVLMAGILPFGAVFIELFFILTAIWENQFYYLFGFLFLVFVILGICCSEIAIVMVYFQLCGEDYHWWWRSFMMSGACAVYVFLYAIFYFVTKLEIVSVVSGLIYFGYSAIMVFAFWIITGTIGFFATYAFVRTIYSAVKID 611
            L  F  +   ++FYVPGVAP  F + + +  KAVK+TS +TQLPY+YY+L FC+P+K  Y  ENLGE+LRGDRIVNTP+++    +  C  LC        L+  QS+   ERI EDY +H+I DNLP A   E               ++ +HGY+LGF T  NK  L+NHL   + Y+++     ++  +RVV F+V   SI   ++K D  ++C  P    S P  I+   EN++ F+Y VHWE+S+I+W++RWDTYL MS+VQ+HWF+IINS+V+V FL+G+L+MIIIRTLR+DIANYNK+DD+E+ +EE+GWKLVHGDVFRPP+YPMILS+L+GSG+Q+FCM+LI I  AMLGMLSP+SRG+L T   FL++FMG F G+ + RLY+TLKG  WK+ AF T  L+PG+VF I F LN F+WGK SSGA+PF TM+AL C+WFGIS+PLVYLGY+FG+RK PY + VRTNQIPRQ+P+Q WYM+ F+G+LMAGILPFGA+FIELFFI +AIWENQFYYLFGFLFLVF+IL + CS+I+IVMVYFQLC EDY WWWR+F++SG  A YV +YAIFYFV KL+IV  +  L+YFGY+A+MV +FW++TGTIGF+A Y FVR IY+AVKID
Sbjct:   12 LLLFSLMCETSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGF-TDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
The following BLAST results are available for this feature:
BLAST of TCONS_00001054-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM9S40.000e+058.23Transmembrane 9 superfamily member 4 OS=Homo sapie... [more]
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