TCONS_00000946-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000946-protein
Unique NameTCONS_00000946-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length281

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000946-protein ID=TCONS_00000946-protein|Name=TCONS_00000946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MYRTFRIPQLAFLGAGTLAETLTKGFIAAGALQINQIWASAPSDTHVMKL
GCKTTTDNVKLVKENKLVALSVKPQVLPKVLREISPHITPDHLLLSFAAG
MKIRNMQYLLPPKTRIARLMTNTPTQFREGVSSFALGPHCREADRKLIQD
LMSTVGYCTEVKENLLDVVTGFAGGGPAYAYCFIEAIADAAVLGGMTREE
AMKMAAKSVLGAARMVEETGDHPGKLKDDVCSAGGSTIRGIHALEKGRMR
SAVIDAVNAATERSSELGKILNEQGSSNKIF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000570XLOC_000570Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000946TCONS_00000946Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028939P5C_Rdtase_cat_N
IPR000304Pyrroline-COOH_reductase
IPR029036P5CR_dimer
IPR0089276-PGluconate_DH_C-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004735pyrroline-5-carboxylate reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006561proline biosynthetic process
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006561 proline biosynthetic process
molecular_function GO:0004735 pyrroline-5-carboxylate reductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028939Pyrroline-5-carboxylate reductase, catalytic, N-terminalPFAMPF03807F420_oxidoredcoord: 10..100
e-value: 3.9E-13
score: 49.7
NoneNo IPR availableGENE3D1.10.3730.10coord: 162..272
e-value: 9.5E-41
score: 138.0
NoneNo IPR availableGENE3D3.40.50.720coord: 6..161
e-value: 6.0E-21
score: 74.9
IPR000304Pyrroline-5-carboxylate reductaseTIGRFAMTIGR00112TIGR00112coord: 10..267
e-value: 2.3E-76
score: 254.8
IPR000304Pyrroline-5-carboxylate reductasePIRSFPIRSF000193P5CRcoord: 8..270
e-value: 3.9E-77
score: 256.8
IPR000304Pyrroline-5-carboxylate reductasePROSITEPS00521P5CRcoord: 223..245
IPR000304Pyrroline-5-carboxylate reductaseHAMAPMF_01925P5C_reductasecoord: 8..267
score: 23.889
IPR029036Pyrroline-5-carboxylate reductase, dimerisation domainPFAMPF14748P5CR_dimercoord: 163..267
e-value: 5.2E-35
score: 119.7
IPR0089276-phosphogluconate dehydrogenase C-terminal domain-likeSUPERFAMILY481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 162..269
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 10..161

Blast
[Close]
BLAST of TCONS_00000946-protein vs. Swiss-Prot (Human)
Match: P5CR3 (Pyrroline-5-carboxylate reductase 3 OS=Homo sapiens GN=PYCR3 PE=1 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 8.420e-73
Identity = 111/264 (42.05%), Postives = 168/264 (63.64%), Query Frame = 0 
Query:    9 QLAFLGAGTLAETLTKGFIAAGALQINQIWASAPSD---THVMKLGCKTTTDNVKLVKENKLVALSVKPQVLPKVLREISPHITPDHLLLSFAAGMKIRNMQYLLPPKTRIARLMTNTPTQFREGVSSFALGPHCREADRKLIQDLMSTVGYCTEVKENLLDVVTGFAGGGPAYAYCFIEAIADAAVLGGMTREEAMKMAAKSVLGAARMVEETGDHPGKLKDDVCSAGGSTIRGIHALEKGRMRSAVIDAVNAATERSSELGK 269
            ++ F+GAG +A  + +G I AG ++   I ASAP+D    H   LGC+TT  N ++++   LV  + KP VLP VL E++P +T +H+L+S AAG+ +  ++ LLPP TR+ R++ N P   +EG    A G H   ++ KL+Q L+   G C EV E  +D+ TG +G G A+   F EA+A+ AV  GM    A ++AA+++LG A+M+   G HP +L+ DVC+ GG+TI G+HALE+G +R+A + AV AAT R+ EL +
Sbjct:   10 RVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCHFQALGCRTTHSNQEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLSGSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPAQLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRAKELSR 273
The following BLAST results are available for this feature:
BLAST of TCONS_00000946-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P5CR38.420e-7342.05Pyrroline-5-carboxylate reductase 3 OS=Homo sapien... [more]
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