TCONS_00000697-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000697-protein
Unique NameTCONS_00000697-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1077

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000697-protein ID=TCONS_00000697-protein|Name=TCONS_00000697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1077bp
RRGKCNLTSDFLNIYFVHVWPNFTIFLEYYTQKMADQVDEKTIQNTDEVS
KEETKEEEVTTKKEDEKTNEQESEGESTDDEDDKPKPPPVKINKAMAVNE
EYNEKMEHDRASRFSFLLKQTEIFSHFLNGAGKKPPKSPLKMKKQPDLPS
SPPPKKGAKDHRHRRTEKEEDEELLEDSKSSQAHVVQFTASPSYIKFGTM
RDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLIGYMKHHRNNSG
PHIVIVPKSTLANWMAEFARWCPTIRTVCLIGNQDQRSAIIRDTLLPGEW
DVLVTSYEMCIREKTVLKKFAWRFLCIDEAHRIKNEKSLLSSIVREFKSS
NRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDAWFNAENLSEEDAI
VKRLHAVLRPFLLRRLKSEVEKSLLPKKITNVYIGLSAMQRQWYTKLLMK
DIDIVNGAGKTDRMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDVHLVD
NCGKMSVLDKLLVRMKERGSRVLVFSQMTRMLDILEDYSMWRGFQYCRLD
GQTPHEERTAQINDFNSPGSDKFVFFLSTRAGGLGINLATADVVVMFDND
WNPQVDLQAQDRAHRIGQTKQVQVFRFITENTIEERIIERAEMKLRLDRV
VIQQGRLVEGQTKLQKDEVLNMIRHGADKVFASKDSTVTGEDIDLILERG
AKKTEEIAKKMSDLGEGQLKNFTMDAPDSIYKFEGQDFRETHDKPGVSHW
IEPPKRERKANYAVDTYFKELMRVNEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLDIEIYSYRKGIGYKVPRDYDMDDAESKKFQKEEQSKIDNAEPLSE
EEQTEKEQLLAQGFTNWNKRDFNQFIKACEKYGRDDLNSICKEVEGKSQA
EVREYAGVFWERCNELTDIDKIMAQIERGEAKIQRRISIKRAMEAKMARY
KSPFHQLRIQYGTNKGKNYTEEEDRFIVCMLHKLGFDRENVYEELRQSVR
SAPQFRFDWFIKSRTAVELQRRCNTLITLIERENQELEEREKREKRKGAK
PNAARTPAQGKRKNEVVAAKPAKKAKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000440XLOC_000440Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000697TCONS_00000697Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR001005SANT/Myb
IPR000330SNF2_N
IPR015194ISWI_HAND-dom
IPR015195SLIDE
IPR017884SANT_dom
IPR009057Homeobox-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0031491nucleosome binding
GO:0003676nucleic acid binding
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0043044ATP-dependent chromatin remodeling
GO:0006338chromatin remodeling
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043044 ATP-dependent chromatin remodeling
biological_process GO:0006338 chromatin remodeling
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0031491 nucleosome binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1016..1047
NoneNo IPR availableGENE3D3.40.50.300coord: 491..655
e-value: 3.0E-38
score: 130.3
NoneNo IPR availableGENE3D1.10.10.60coord: 951..1058
e-value: 1.0E-19
score: 70.0
NoneNo IPR availableGENE3D3.40.50.10810coord: 201..416
e-value: 2.8E-59
score: 199.7
NoneNo IPR availableGENE3D1.20.5.1190coord: 918..950
e-value: 1.2E-15
score: 56.6
NoneNo IPR availableGENE3D1.10.10.60coord: 863..917
e-value: 1.5E-5
score: 24.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1034..1077
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 830..855
NoneNo IPR availableCDDcd00079HELICccoord: 503..625
e-value: 1.26737E-29
score: 115.028
NoneNo IPR availableCDDcd00046DEXDccoord: 220..359
e-value: 1.31639E-26
score: 106.653
NoneNo IPR availableCDDcd00167SANTcoord: 866..906
e-value: 1.04525E-5
score: 43.333
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 533..617
e-value: 1.0E-23
score: 94.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 504..617
e-value: 5.0E-20
score: 71.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 507..658
score: 20.204
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 196..388
e-value: 9.8E-41
score: 151.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 212..377
score: 25.725
IPR001005SANT/Myb domainSMARTSM00717santcoord: 863..912
e-value: 2.8E-6
score: 36.8
coord: 965..1029
e-value: 0.0035
score: 26.6
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 212..482
e-value: 1.7E-73
score: 247.3
IPR015194ISWI, HAND domainPFAMPF09110HANDcoord: 763..863
e-value: 4.4E-31
score: 107.8
IPR015194ISWI, HAND domainSUPERFAMILY101224HAND domain of the nucleosome remodeling ATPase ISWIcoord: 764..865
IPR015195SLIDE domainPFAMPF09111SLIDEcoord: 920..1033
e-value: 6.1E-42
score: 142.1
IPR017884SANT domainPROSITEPS51293SANTcoord: 862..914
score: 18.628
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 918..1043
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 866..916
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 417..697
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 190..415

Blast
[Close]
BLAST of TCONS_00000697-protein vs. Swiss-Prot (Human)
Match: SMCA5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5 PE=1 SV=1)

HSP 1 Score: 1405.96 bits (3638), Expect = 0.000e+0
Identity = 689/968 (71.18%), Postives = 814/968 (84.09%), Query Frame = 0 
Query:  102 YNEKMEHDRASRFSFLLKQTEIFSHFLNGAGKKPPKSPLKMKKQPDLPSSPPPKKGAK-------DHRHRRTEKEEDEELLEDSKSSQAHVVQFTASPSYIKFGTMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLIGYMKHHRNNSGPHIVIVPKSTLANWMAEFARWCPTIRTVCLIGNQDQRSAIIRDTLLPGEWDVLVTSYEMCIREKTVLKKFAWRFLCIDEAHRIKNEKSLLSSIVREFKSSNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDAWFNAENLSEEDAIVKRLHAVLRPFLLRRLKSEVEKSLLPKKITNVYIGLSAMQRQWYTKLLMKDIDIVNGAGKTDRMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDVHLVDNCGKMSVLDKLLVRMKERGSRVLVFSQMTRMLDILEDYSMWRGFQYCRLDGQTPHEERTAQINDFNSPGSDKFVFFLSTRAGGLGINLATADVVVMFDNDWNPQVDLQAQDRAHRIGQTKQVQVFRFITENTIEERIIERAEMKLRLDRVVIQQGRLV-EGQTKLQKDEVLNMIRHGADKVFASKDSTVTGEDIDLILERGAKKTEEIAKKMSDLGEGQLKNFTMDAPDSIYKFEGQDFRETHDKPGVSHWIEPPKRERKANYAVDTYFKELMRVNEPKAPKAPRPPKQPNVQDFQFFPPRLFELLDIEIYSYRKGIGYKVPRDYDMDDAESKKFQKEEQSKIDNAEPLSEEEQTEKEQLLAQGFTNWNKRDFNQFIKACEKYGRDDLNSICKEVEGKSQAEVREYAGVFWERCNELTDIDKIMAQIERGEAKIQRRISIKRAMEAKMARYKSPFHQLRIQYGTNKGKNYTEEEDRFIVCMLHKLGFDRENVYEELRQSVRSAPQFRFDWFIKSRTAVELQRRCNTLITLIERENQ-ELEEREKREKRKGAKPNAARTPAQG 1060
            Y EKM+ DRA+RF +LLKQTE+F+HF+  A +K P SPLKMK     P  P  KK  K       D+RHRRTE+EEDEELL +S  +     +F  SPSY+K+G +RDYQ+RGLNW+ISLYENGINGILADEMGLGKTLQTISL+GYMKH+RN  GPH+V+VPKSTL NWM+EF RW PT+R+VCLIG+++QR+A +RD LLPGEWDV VTSYEM I+EK+V KKF WR+L IDEAHRIKNEKS LS IVREFK++NRLLLTGTPLQNNLHELW+LLNFLLPDVFNS+DDFD+WF+  N   +  +V+RLH VLRPFLLRR+K++VEKSL PKK   +Y+GLS MQR+WYT++LMKDIDI+N AGK D+MRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD+HLV N GKM VLDKLL ++KE+GSRVL+FSQMTR+LDILEDY MWR ++YCRLDGQTPH+ER   IN +N P S KFVF LSTRAGGLGINLATADVV+++D+DWNPQVDLQA DRAHRIGQTK V+VFRFIT+NT+EERI+ERAEMKLRLD +VIQQGRLV +   K+ KDE+L MIRHGA  VFASK+S +T EDID ILERGAKKT E+ +K+S +GE  L+NFTMD   S+Y FEG+D+RE   K   + WIEPPKRERKANYAVD YF+E +RV+EPKAPKAPRPPKQPNVQDFQFFPPRLFELL+ EI  YRK IGYKVPR+ ++ +A   + QKEEQ KID AE L++EE  EKE+LL QGFTNWNKRDFNQFIKA EK+GRDD+ +I +EVEGK+  EV EY+ VFWERCNEL DI+KIMAQIERGEA+IQRRISIK+A++ K+ RYK+PFHQLRI YGTNKGKNYTEEEDRF++CMLHKLGFD+ENVY+ELRQ +R++PQFRFDWF+KSRTA+ELQRRCNTLITLIEREN    E+ +  +K++G KP+  +    G
Sbjct:   80 YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMK-----PGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQ-KIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRNPELPNA--AQAQKEEQLKIDEAESLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSTQKRKMDG 1039
The following BLAST results are available for this feature:
BLAST of TCONS_00000697-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SMCA50.000e+071.18SWI/SNF-related matrix-associated actin-dependent ... [more]
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