TCONS_00000597-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000597-protein
Unique NameTCONS_00000597-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length659

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000597-protein ID=TCONS_00000597-protein|Name=TCONS_00000597-protein|organism=Clytia hemisphaerica|type=polypeptide|length=659bp
NRVMISNADFSLSRGDIEQALEMLRKITPDQSYFIQAREKMAEIYLKYRK
DKRLYVSVYRELVEKMPTSESFLLLGDAYMSIMEPEKAIEVYESALKKNP
KDYSLQMKIGQAFIKTHQYAKAISYYEAAVRAGNHVLRFDLAELHMKLGN
FEKAERILKQTLLKNETTTALSRSIEEARCQFLLAQIYQKTKESEEILEA
YLKAKELQSKVIKRVATEQPDDLQEHKALAAKVSYNIGQYYYNGKDFDRA
IKSYKEATYFNESEITYILALAELYLLNQDLDACQSQLQTILKNNKDCDR
ATLMMADLLFRKGEYDSATFHFQEILSRKPSYYDALAKLVELLRRAGKLE
DGPKYLDQALASNPRAQMEAGYNYCKGLYEWYQNNASSALKFFNLARKDS
LWGEKALFNMIDICLNPDSDIVGGETFDVAEGTNQYEKHDTEQMAIKTAE
KLLKEMKPSRNPLKQKLFENQLLVTTRNTQLVQKALNNLMEIAQVENDYV
PALLGMATAHMILKQTPKARNQLKRISKMSWNSEDAEDFERSWLLLADIF
IQNGKYDMAQEQLKKCLTYNKSCAKAWEYLGFIMEKEQSYKDAALNYENA
WKFTNESSPAIGYRLGFNYLKAKRFVDAIDVCHKVLGKHPNYPKIRKEIL
DKARAQLRT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000351XLOC_000351Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000597TCONS_00000597Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 103..136
e-value: 13.0
score: 14.0
coord: 265..298
e-value: 370.0
score: 1.1
coord: 333..366
e-value: 460.0
score: 0.3
coord: 500..533
e-value: 380.0
score: 1.1
coord: 231..264
e-value: 0.0051
score: 26.0
coord: 574..607
e-value: 420.0
score: 0.7
coord: 540..573
e-value: 0.5
score: 19.4
coord: 609..642
e-value: 15.0
score: 13.5
coord: 178..211
e-value: 18.0
score: 12.8
coord: 299..332
e-value: 26.0
score: 11.3
coord: 137..168
e-value: 86.0
score: 6.7
coord: 69..102
e-value: 0.0011
score: 28.2
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 70..101
e-value: 0.027
score: 15.0
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 541..572
e-value: 2.3E-5
score: 24.1
coord: 178..209
e-value: 0.025
score: 14.7
coord: 231..262
e-value: 0.0014
score: 18.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 333..366
score: 6.225
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 574..607
score: 6.844
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 178..211
score: 6.402
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 609..642
score: 6.903
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 540..573
score: 7.611
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 231..264
score: 10.06
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 69..102
score: 11.505
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 299..332
score: 8.024
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 103..136
score: 7.346
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 212..314
e-value: 2.1E-13
score: 49.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 593..658
e-value: 6.3E-6
score: 25.7
coord: 147..211
e-value: 9.2E-8
score: 31.6
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 354..418
e-value: 0.2
score: 11.0
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 537..592
e-value: 4.3E-9
score: 35.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 315..353
e-value: 8.6E-9
score: 34.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 119..146
e-value: 1.3E-5
score: 24.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 434..536
e-value: 5.1E-6
score: 26.0
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 76..118
e-value: 2.3E-11
score: 43.0
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 2..75
e-value: 0.051
score: 13.0
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 8..102
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 483..645
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 168..257
NoneNo IPR availablePFAMPF14559TPR_19coord: 117..167
e-value: 9.3E-7
score: 29.2
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 72..165
coord: 229..364
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 69..366
score: 29.472
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 540..642
score: 16.166

Blast
[Close]
BLAST of TCONS_00000597-protein vs. Swiss-Prot (Human)
Match: TT21B (Tetratricopeptide repeat protein 21B OS=Homo sapiens GN=TTC21B PE=1 SV=2)

HSP 1 Score: 751.51 bits (1939), Expect = 0.000e+0
Identity = 360/662 (54.38%), Postives = 500/662 (75.53%), Query Frame = 0 
Query:    2 RVMISNADFSLSRGDIEQALEMLRKITPDQSYFIQAREKMAEIYLKYRKDKRLYVSVYRELVEKMPTSESFLLLGDAYMSIMEPEKAIEVYESALKKNPKDYSLQMKIGQAFIKTHQYAKAISYYEAAVRAGN-HVLRFDLAELHMKLGNFEKAERILKQTLLKNETTTALSRSIEEARCQFLLAQIYQKTKESEEILEAYLKAKELQSKVIKRVATEQPDDLQEHKALAAKVSYNIGQYYYNGKDFDRAIKSYKEATYFNESEITYILALAELYLLNQDLDACQSQLQTILKNNKDCDRATLMMADLLFRKGEYDSATFHFQEILSRKPSYYDALAKLVELLRRAGKLEDGPKYLDQALASNPRAQMEAGYNYCKGLYEWYQNNASSALKFFNLARKDSLWGEKALFNMIDICLNPDSDIVGGETFDVAEG--TNQYEKHDTEQMAIKTAEKLLKEMKPS--RNPLKQKLFENQLLVTTRNTQLVQKALNNLMEIAQVENDYVPALLGMATAHMILKQTPKARNQLKRISKMSWNSEDAEDFERSWLLLADIFIQNGKYDMAQEQLKKCLTYNKSCAKAWEYLGFIMEKEQSYKDAALNYENAWKFTNESSPAIGYRLGFNYLKAKRFVDAIDVCHKVLGKHPNYPKIRKEILDKARAQLR 658
            RV I+NAD +L++GDIE+AL +L+ +T +Q YFI+AREKMA+IYLK+RKDK LY++ +RE+ E+M    SFLLLGDAYM+I+EPE+AI  YE AL +NPKD +L  K+G+A IKTH Y+ AI+YYEAA++ G  + L +DLAEL +KL  ++KAE++L Q  L +E    LS  +E+ RCQ LLA++Y K ++  + + A  +A+ELQ++V+KRV  EQPD +   K LAA++   I ++    +D+++AIK Y+EA    E++   +L LA LYL   D D+C  Q   +L++++D + AT+MMADL+FRK +Y+ A FH Q++L RKP  Y  L++L++LLRR GKLED P++   A   N RA++E G+ YCKGLY WY    + AL+ FN ARKD  WG+ AL+NMI+ICLNPD++ VGGE F+  +G   N  EK ++ Q+A++TAEKLLKE+KP   +  ++ ++ EN  L+ T+    V++ALN   EIA  E +++PALLGMATA+MILKQTP+ARNQLKRI+KM+WN+ DAE+FE+SWLLLADI+IQ+ KYDMA++ LK+CL +N+SC KA+EY+G+IMEKEQ+Y DAALNYE AWK++N ++PA+GY+L FNYLKAKR+VD+ID+CH+VL  HP YPKIRK+ILDKARA LR
Sbjct:  655 RVTIANADLALAQGDIERALSILQNVTAEQPYFIEAREKMADIYLKHRKDKMLYITCFREIAERMANPRSFLLLGDAYMNILEPEEAIVAYEQALNQNPKDGTLASKMGKALIKTHNYSMAITYYEAALKTGQKNYLCYDLAELLLKLKWYDKAEKVL-QHALAHEPVNELSALMEDGRCQVLLAKVYSKMEKLGDAITALQQARELQARVLKRVQMEQPDAVPAQKHLAAEICAEIAKHSVAQRDYEKAIKFYREALVHCETDNKIMLELARLYLAQDDPDSCLRQCALLLQSDQDNEAATMMMADLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDLLRRCGKLEDVPRFFSMAEKRNSRAKLEPGFQYCKGLYLWYTGEPNDALRHFNKARKDRDWGQNALYNMIEICLNPDNETVGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGHVQLRIMENYCLMATKQKSNVEQALNTFTEIAASEKEHIPALLGMATAYMILKQTPRARNQLKRIAKMNWNAIDAEEFEKSWLLLADIYIQSAKYDMAEDLLKRCLRHNRSCCKAYEYMGYIMEKEQAYTDAALNYEMAWKYSNRTNPAVGYKLAFNYLKAKRYVDSIDICHQVLEAHPTYPKIRKDILDKARASLR 1315
The following BLAST results are available for this feature:
BLAST of TCONS_00000597-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TT21B0.000e+054.38Tetratricopeptide repeat protein 21B OS=Homo sapie... [more]
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