TCONS_00000590-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000590-protein
Unique NameTCONS_00000590-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000590-protein ID=TCONS_00000590-protein|Name=TCONS_00000590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MSALLSLIFYTWLGYWSYRVIKFVLFMITCHVLPSFGIYNDLKKYGQWAI
ITGATDGIGKAYAVELAKQKFNIVLISRTEEKLQRVAEEIKNAHGVDTKY
IVFDFSTPEGYEERIGNVISDLDVGVLVNNVGMSSKWDRLYDELEMAEHI
RVMHTNTFGEMHMTYMLTKKMIQQKRGIMIHISSFFGYYPIGLISVYSPT
KAFVNSFVQNLQAETKHCKDVHHQLVTPFFVATNMTKGSVKVTRVTPDAA
TFAGAALRTVGLTPHTFGYWTHDILGSILMTFPPFVFGRLPFVKSFQKYC
KNRRLKTLEKSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000348XLOC_000348Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000590TCONS_00000590Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availableGENE3D3.40.50.720coord: 41..253
e-value: 3.1E-37
score: 127.6
NoneNo IPR availablePIRSFPIRSF00012611-beta-HSD1coord: 1..306
e-value: 1.5E-79
score: 265.0
NoneNo IPR availableCDDcd0535617beta-HSD1_like_SDR_ccoord: 46..286
e-value: 6.60423E-86
score: 259.458
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 48..65
score: 44.81
coord: 197..216
score: 26.02
coord: 219..236
score: 23.1
coord: 171..187
score: 28.78
coord: 122..133
score: 37.1
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 48..239
e-value: 1.6E-39
score: 135.3
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 43..287

Blast
[Close]
BLAST of TCONS_00000590-protein vs. Swiss-Prot (Human)
Match: DHB12 (Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sapiens GN=HSD17B12 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 8.663e-55
Identity = 114/320 (35.62%), Postives = 186/320 (58.13%), Query Frame = 0 
Query:    2 SALLSLIFYTWLG-----YWSYRVIKFVLFMITCHVLPSFGIYNDL---KKYGQWAIITGATDGIGKAYAVELAKQKFNIVLISRTEEKLQRVAEEIKNAHGVDTKYIVFDFSTPEGYEERIGNVISDLDVGVLVNNVGMSSKWDRLYDELEMAEHI--RVMHTNTFGEMHMTYMLTKKMIQQKRGIMIHISSFFGYYPIGLISVYSPTKAFVNSFVQNLQAETKHCKDVHHQLVTPFFVATNMTKGSVKVTRVTPDAATFAGAALRTVGLTPHTFGYWTHDILGSILMTFPPFVFGRLPFVKSFQKYCKNRRLKTLEKS 311
            SAL +  F  W+G     Y + R I + LF      L  +G+ N+       G+WA++TG+TDGIGK+YA ELAK    +VLISR+++KL +V+ EIK    V+T+ I  DF++ + Y ++I   ++ L++G+LVNNVGMS ++   + ++   +++  ++++ N      MT ++   M+++ +G +++ISS  G  P+ L+++YS TK FV+ F Q L  E +  K V  Q V P+FVAT + K   K T   P   TF  +A++TVGL   T GY  H ++GSI+   P +++  L  V +  K  +   LK  +K+
Sbjct:    3 SALPAAGFLYWVGAGTVAYLALR-ISYSLFT----ALRVWGVGNEAGVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIY-DKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYR-SKGVFVQSVLPYFVATKLAKIR-KPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIY--LKIVMNMNKSTRAHYLKKTKKN 312
The following BLAST results are available for this feature:
BLAST of TCONS_00000590-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHB128.663e-5535.63Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sa... [more]
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