TCONS_00000431-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000431-protein
Unique NameTCONS_00000431-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000431-protein ID=TCONS_00000431-protein|Name=TCONS_00000431-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MQAPPAYSEKSQDPYAPPPGQPYPPQQPGYPPTSQPGYPPTSQPGYAPPP
GAYPPPGAYPPPQQAGYQQQYAPPPGPPPMATNQAVHQQTTVITTQPTTQ
VLAVSFGEMPTSCTCPHCQAQIVTAVHYEAGSLAWIICCVLLFVFWPLMC
LPFCLTSLQDAVHTCPNFCGSFVSTVDHLSTSKITLSRKGNSCTCSQIKS
LITQSVELTPFIFYSSIKLLLICVLLLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000279XLOC_000279Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000431TCONS_00000431Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006629LITAF
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006629LPS-induced tumour necrosis factor alpha factorSMARTSM00714litafcoord: 110..178
e-value: 1.2E-18
score: 77.9
IPR006629LPS-induced tumour necrosis factor alpha factorPFAMPF10601zf-LITAF-likecoord: 109..175
e-value: 8.9E-18
score: 64.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 17..103

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000431-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top