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TCONS_00000431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000431
Unique NameTCONS_00000431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length961

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000431 ID=TCONS_00000431|Name=TCONS_00000431|organism=Clytia hemisphaerica|type=transcript|length=961bp
TAAGTTCGGAACACTCCGCAATAAATACAGTcatgtgaaaaaaatttcgt
CAAAAAATCCAAGAatagtaaaatataaaaaagatgcAAGCACCACCAGC
CTATAGTGAAAAATCACAAGATCCATATGCGCCACCACCAGGCCAACCGT
ATCCTCCACAACAACCAGGATACCCACCCACCAGCCAACCTGGTTATCCA
CCAACTAGTCAACCTGGTTATGCACCACCACCAGGAGCCTATCCACCCCC
TGGTGCCTACCCACCACCACAACAAGCAGGATATCAACAACAATATGCTC
CACCACCTGGTCCACCACCAATGGCTACCAACCAGGCCGTCCACCAGCAA
ACCACAGTAATCACCACACAGCCAACAACACAAGTCCTAGCTGTTAGTTT
TGGTGAAATGCCTACTTCATGCACATGTCCTCATTGTCAAGCACAAATTG
TGACCGCTGTTCATTATGAAGCTGGTTCCCTTGCATGGATCATTTGTTGT
GTCCTTTTGTTTGTCTTCTGGCCTTTGATGTGTCTGCCGTTCTGTTTGAC
TTCATTGCAAGATGCTGTTCACACATGTCCTAATTTTTGTGGAAGTTTTG
TTTCAACAGTGGATCACCTTTCAACCTCAAAAATCACTCTTTCTCGAAAG
GGAAATTCCTGTACTTGCTCTCAAATCAAAAGTCTAATCACCCAATCAGT
AGAATTAACTCCCTTCATATTTTATAGTTCAATAAAGCTTTTATTAATTT
GTGTATTATTACTGAAATGATTtccacttgttttttttttcaattttgga
gttttctataatttttgtttgcatttttatttgtaaaatgATAAGAATGA
AATATATCTGCACGTACGTCTACACTCTTTTAAAATGATATggtattttc
aatttaaaaatctagTCATCAATGTTGATTTTTAAAACCAGTGATCTTTT
TTCATAAACTT
Run BLAST on NCBI

protein sequence of TCONS_00000431-protein

>TCONS_00000431-protein ID=TCONS_00000431-protein|Name=TCONS_00000431-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MQAPPAYSEKSQDPYAPPPGQPYPPQQPGYPPTSQPGYPPTSQPGYAPPP
GAYPPPGAYPPPQQAGYQQQYAPPPGPPPMATNQAVHQQTTVITTQPTTQ
VLAVSFGEMPTSCTCPHCQAQIVTAVHYEAGSLAWIICCVLLFVFWPLMC
LPFCLTSLQDAVHTCPNFCGSFVSTVDHLSTSKITLSRKGNSCTCSQIKS
LITQSVELTPFIFYSSIKLLLICVLLLK
Run BLAST on NCBI

transcript from alignment at sc0000002:575625..585982+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000431 ID=TCONS_00000431|Name=TCONS_00000431|organism=Clytia hemisphaerica|type=transcript|length=10358bp|location=Sequence derived from alignment at sc0000002:575625..585982+ (Clytia hemisphaerica)
TAAGTTCGGAACACTCCGCAATAAATACAGTcatgtgaaaaaaatttcgt CAAAAAATCCAAGAGTGAGTATAAGAGTGAAAGTTCTTGGCTTTCCAGTT CTTTCACTTCTAAATTGTTAAAgctgatttaattttttctaaaatatttg ggCTGTTTGTTTTATCTTCACGTCAACCATTAAATTTGTTGTGCTTTGAT CGTTCACttgaaaattgtttggttcagagaaggacttttttcaaatttta atacgTACAGTAGCTAGCTATAAAAAATGGATTaaattttgtgtgaaaaa acttttgcgcATGGAATGGAGGATCAAAATTCTTCGCGTAGACAAATTCT TGCCaatcagcctctttttcacccaatttcttttgttttcctaaGAGGTT TCtgttttataaatattttgtgcaaattAAAATAGGACCCTCCCGACGCG GTGCCTCGGAAACTTCTGGAGTTTTCggagcagctaaaaaaacactattt ttctctccgGAAATTCCAGAGCTCTTCCGGTGCTTCcggagcaagtgatt tttaacactttctaaaaaaccgtttaaacatggttacaagcaaaaaatat tcaaaatattgatattaTGGTTCAGCCATGGatgtataaagaaacaggag aagtatgctattgtaaccatgctcgccctacgattaaaaatattacgagg tatgcatgctcataatctcatatatcgtgcatttttaatgagctcttttg ttgataggtaaaATCTtgcttattggctaacttaattGTTGGAAATAATA TAAGATgggacgagattcattgtttctgacattggtgtaagaaaatattt ggattaaaaaagggcctgtaaactttgcaatccttcatcaaatgacaaga tttttNNNNNNNNNNNNNNgtcaacattttcttcaaggtgaactctattg cttaatactttcctccaaaattctccagtgactttttgtctacaaattgg gtctgaaattgtgtgtgcttataaagaacttttcattttctggcttgaga aaatatcttttcaaaacaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcctagaa tttcttttgatttattacataaaagaaatcaaaagactttaacgaccaat taccgacaaattcatctcctgtctttctttatacctctatggttcagcca ttaatgaaattgaatttgtcacattatATTTAGAAGCATCACTTTGGTCG AAatatcgaaaaaattaaaaaacgtgAGGGTTCACATGAGTCggctgatt ttttttaaatacgtgCGTGCGCAGTTAGCTTTCACATGATTAGCACAGCG AGCGATATCGTAATTATATCACAGACATCTTCTCCGGAACCTTCAGGAGT TCCGGTGCAGACCAATCACCGAAAATCTAACTCCGGAACACCGGAAGTCC TCCGGAATCTTCCGGTGTTCCAGAGCATGAAAAAAAACAGCACTTTTTGC TCTGGACAtttccggagcgccgggagggtcctatAATAAAATCCTCttga aatttaatccactttaGGCAGGCAGCAGAgccacaaataacttgtgttcg cgTCGTCCGACCAACTCAgagtttttcttacttttccaaatcttttgagT CGGAAAGTCCTGCCTaactcaaatttgaaaaaatttcatatttccaaCAA TTCCGATTGCCGACCTTATCTACCATACCAACTCACTTTTTGGAGctgaa cacaagttatttgtgaccGCGGCCTTAAGAATGTACATAAGGTAAGACGT GTCAAAAGAAATGGATTAACATTTGattcatattttgttttttcacaaAA GCTAATGGAGTTGGATGTTCTTGCTTTTTTAGACAGTTTAGCCAGAATCA TGTTTTTTCTTCAATGACACTAAGCAAGcattcaataaaagaaaacaaag attttaaaaagaaaaacccaAATAAAGGACTAAAAATGATTGTTGACCAA TGTTGGGGATATGTAAAACTCAAAATCATCCTTTGATATATATAACCAAG GGGCCTGAAGGGGCACTTGAGTCTCAACCCAAACATACACAGtatcaggg aaatccctcaattgcggtagtaatttcttactgcaattgcggtataaacg tcacttttaaatttttcatatagcgcaattgcagtatattcaagaaacag aattcaagattcaaggagaaaacaggcaatttttgtacataattggtcat atctttttaacgcacagacaaaatattttttccgtagatcagattatttt aataaagaaaagctaTCTTCTCGTACAATTttttacagtcgatgtttgtt tatctttgtcgaccagcactatatgtagcTGTTATAAGACTTTGTAGGCT AATCACGAATGAAaactactgcaattgcagtatacagcaattgagggatt tccctgactgataCACGAANACTGTTATAAGACTTTGTAGGCTAATCACG AATGAAaactactgcaattgcagtatacagcaattgagggatttccctga ctgataCACGAAACTTTTGCgatcatgttcgggccaaaataaaaaaagca tgCAATGTTCAGGACGTGATATGATATTGGGCCACAAAAATTGGGATTTT AACCTTCAAAAACCTGGCCCGAATATGGTCCTTGAAGGGAAAATATGTTA TATGGCggaattgttttattttgttcaaatgtgccaaatgtttttaaaaa tccaATCACAGCGATATccaattgttttgttttgttttgttcaaTCACAT TCAATTGTGTTAAAAGTATaaacatcaaatcaaatgaaagtgctttcatc caatcaggcgaaccctaaaaatatttttgtttccggtccaccgggtgacg aaaaaaacactcacccggccggccgcaaaaaaattttttttggctaaatt tcgatcccaaaacacgattttttaaagcactcgtagaagttaaaatgctg gtcttctttaccttaaatctgtagtaacttgacaccgctacaggctttgg cataagaaaaattcacgtgtgatcatcgcacgcctagaTTTTAATTTATA GTGGTCTAGGCGTGCGATTATTCAAATACAATTGAATATTCAATATCTCT AAGAacactctctttcattttgaatatttatcttcaattgctaaaggctc caaactgtgattacgaagtgaacttttttgagaaaaaagtggagtgagag aaacatttccccaattttttaaatcctcactttatgaatgtttcttttta ttttactcacaagtcagcatgattccttttataaaaataaagctgtttac ttactgaaaagtccccacattgtgaatgtttctatttattttactcacaa atcagcatgattcttttataaaaaccaagttgtatataaaaaaaacattc ttaaaagttgagttgtaagcaagaattaacaaaaacaatgcagggtttag tttgagattaataaaatttcatttctataacaatgatcaggataaaacct tcattccaagtgatttctaggcgtgcattttacagtagaatataaaatat cacgtgCGATAAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaaatcacacgcctcaaaa actgattcacgaaagttttccaaacaaacaaactaaccctaaccctaacg atgatgtacgaaaaaaaatgcggccgggtgacgatgaaataaattttcac ccggccggtggaccggaaacaaaaatttttttcgggttCGCCTCAGAAAG GATTTTTGACAATCTTAACTCTGGCATCAAATTCCAGCTTTTGACTTTTG ACAACTATACAAGGATCctgttagcctggatatccaagctcaaaatttta gaaaaacaaaaattagtccggcggcgatccaggatcacccttacaattag taaatatgggtttttattttattttcccatcatatggtcccttgggaccc caaaaccagtttttgccaggctggcaaagctggggaaaGTTTTTTgtggg ggcttgaagggggtagggtcattttagcctgggggtccttagaaagtcga tttttgaagttctcatttagctaaaactgattgtgccatcagatagaNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTGGCGGACTTAGTCT CCCGGAATTggctgatacgtcttcaaaaatgcaatattttatgctgacgt cagcatttttgagagaatttccaGCGAAAGAAACCACTTTTAACcgatgc gtctcgaagagtactatcgattagaggggtcatttatagggtttcctagg ctagatcatgagatattagagtttgaaattttgctgactcagcagaNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaatg caaatcgctctagggagaccaggctgtaaaccagaacataaaatatcaaa aactagactgtgaaatagtttacagcctggatatccaggctaggatCCTG TTGATGGATTCTAATTCTATCTTTAAGGGGAATTAGAGTGTGTTTCGTCA GTAAGTTTGAAGGGATTTGAATTTAATTGACAATGGGAAATTATCAAACA GTAAAAGGTCAAATTGGAGAGCATCAGCTGTATATTATCACATTTGAATG GAAAAGAATAGTAAAAAGTCTTGCTCATCTTTACAAATTTGCAGTTGGCA cgcctcaaaaaaaaaaaaataaatactttgATTACAAAACGATCATAGGC TTATCGCCAACTTACAGGACTTGTATGCCCTTCTCACACAGAAGACCTGC GTTGACTTTAAAAACTAATCTTAAGTTAGCTATTTTGTTGAAGGTGTACC CCttcttaaatttgaaaatttgtatcGGCGTCTCATATAATCTATATAtc tgtatatattaatacgcttaaacgtgtgtgtttacaacattttgtaaaaa gttttcgaaaatctaacaaaggtctacaaagcctcctcttcatggcgttg aaccatcatctttttgcaccttaagcagatttcctaccactagactaact ttgagaccccaaaatactattttctattcaccaaatttttggagcttgat gggttaaaatcaaccatcttcccaattttttttgtcattttaaaaaattc ttattcttaaaaatttctgtttacaatagcagctccctatcactttcaaa acttttcaaaacttttcaaagtccttcaaagtctttcaaaatctttcaaa gtctttcaaagtcaccctcgaatgtccAACCACGATGGCTACTGTAGCCA CGATAGCTAAAAGGatctaaaatatacttttgttaagccatttatttaat tgtggttaaaaattacaatgcaatgttatcttctttctcttttatttcct aaaatcaaaatcaaatcatcaatCGGCAGCTATCTTTCTGCCGTTATaat tttttagatgtgtagtgattcactggaatgggacacgcagcgtgcgacgc tgcgcatacggctagtatTCTTTTATAATAATATTCTTCAATTAGAACGT CAAATCTTTTATTGgataggttttttttttcaaataatagtGTTAAATTT CCTGCTCAACCAAAGCTTGTCTACCTTCCTCTCGAGTCTTGCCTGGAAAG ATATAAAAAGATGGAAGTAAAATGGGGACAGGTTTTTTTTAGGgttaatc aaaaagaaatatctAAGAGACCCCTTTGCATATAATTATGTCTGTTATTA TAATTATGTCAGGCCATGTCTGTGATGTGCACGTCAAAATTTTATACTAC ACGGTACCAcatagtttttttgttttaacaTGAAATGTacactttaatcg tagaaattttagcgagactaattttagcgttttagcaagttttccctatt ttcgctaaaataaatctcgctaaaacgcACCGAATTGACAGattgctaaa atttatccgcgcgaaatttttcgaaaagctgattgctaaaataaatccag tatgttttttcatcattttgttatcattttcatatttttttcaaaaacta gtaATATGGGCGTAAATTTCCAAGTTTTTCTGTTCTTAGTCAAGAATTGT GTTACAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNtcgtgattcgctaaaataaatccaaaaaaaa tcaagattttcctgactcgctaatatgcgctaaaattaatctcgctaaaa tttctacgattaaagtatatgATTAAATCAATATATTGCTGGATTTAGTT TTGAGCGACAGAAGAATGATTATTCTATGCTGAGAGTATTTAGAACATGT CATGTTTTAATGTTGTAGTAattgtttttttcaactttgCAATTAGCAAA GAAAGTTTCCAATAAGTTATAACAAAAAAAGGTGCCCATTCCATTGATTA AAACCAAAGAGGGCTACAGTATTCACATTATCAATATTTGAGTGAGTTAA TGCACCAACTTAGAGTGCTCCTAATGAGTATTTTATTATATTGGACTGGC TATTTTCTAAGAACATTATATTATACAATGTTTTTAAGATATAGTAATTA CTTAACAAACTGCTATTAAATCTGTTAATGAGTTACTGACGTATGTACCT CAAAGCTGTTTACAATGCACTAATGTGAAAGATGAAAATTGatgattaaa aaacaaaaaactgatttCTTACATCATAGTAGATCACATGTATACTACAC TCATCCTAATTGCGTTTCTTTAATGTTGAGTATCTATTTGGAAAGTAAAG TTTGTTTATAATATTTAAAGTTTTACTAGCTATTATGTCAAATGTAATTA ATCATGTTGGTTGAAGtttacataaaattgtcatctTTCAGatagtaaaa tataaaaaagatgcAAGCACCACCAGCCTATAGTGAAAAATCACAAGATC CATATGCGCCACCACCAGGCCAACCGTATCCTCCACAACAACCAGGATAC CCACCCACCAGCCAACCTGGTTATCCACCAACTAGTCAACCTGGTTATGC ACCACCACCAGGAGCCTATCCACCCCCTGGTGCCTACCCACCACCACAAC AAGCAGGATATCAACAACAATATGCTCCACCACCTGGTCCACCACCAATG GCTACCAACCAGGCCGTCCACCAGCAAACCACAGTAATCACCACACAGCC AACAACACAAGTCCTAGCTGTTAGTTTTGGTGAAATGCCTACTTCATGCA CATGTCCTCATTGTCAAGCACAAATTGTGACCGCTGTTCATTATGAAGCT GGTTCCCTTGCATGGATCATTTGTTGTGTCCTTTTGTTTGTGTAAGTAAA CAACTTCTTTTACCTTCACTGCTCAGTGTGAATTATTGAGTGATGTTTGT CCTACAAATTACTGATGCACAATTGCATCGTGTTGAATATTAGTTGGGAA GGTGAATGTTTAATACTTTTTTTCTTAAGGTTATCAACCACACTTTGAAT TTAGCAGTTTTACGGTTACAATGTTCACGGGGTCAATCATATACTTTTTA ACACTATCACTTTAGGTATCCTTTGTTTCAGTAGAAGCTTTTCATACAAT ATCAAACATTATATAATGATGTAAATTTCTATGTTAAATTACATTCTTCT TGTTATTTTCAGCTTCTGGCCTTTGATGTGTCTGCCGTTCTGTTTGACTT CATTGCAAGATGCTGTTCACACATGTCCTAATTGTAAGAGACAAGTTGGT GCTTTCAGACGTTAAGGGGGATTGTGGGGTCTGGGCCCTATTTCTTTGTG GTAGTGTGAGAAGAAGGAgagagaaaaattcttttatattttaaatatgt TTATTGATAATATTATGTGTTTTGTCGGTTTTATGTTTTAGGGTGATAGT TATGTATCCCTTTTATTATATATCAGTTTTTAAGTTGAAACTTTGTTTTT GATAACTACTCCCATTTGACTTATAAGTCTGGAGGATAACTCGTTTTATT TTAAGGTTGAGTCACTAGAAATTTATAATTCTCTTTATAAAGAATTCAGT TCTCAAATCGTTCTATTATATTCAGGTAAAAGGATAAGGTACTAAATAAC ATAATTATAAGTACACTTTTCCATTCCTTAGGCTATTATAGTCGTATCCT TAGtgatcaaaatttcatttagaAAGGCTAAGactttcaattttctttgt atatTGTATGTTTTATTCCAACTGCAGTCAAACACCATTGACTTAATTGA CTGACACTCTACATTTCACAATCACTTTTTAGTTTGTGGAAGTTTTGTTT CAACAGTGGATCACCTTTCAACCTCAAAAATCACTCTTTCTCGAAAGGGA AATTCCTGTACTTGCTCTCAAATCAAAAGTCTAATCACCCAATCAGTAGA ATTAACTCCCTTCATATTTTATAGTTCAATAAAGCTTTTATTAATTTGTG TATTATTACTGAAATGATTtccacttgttttttttttcaattttggagtt ttctataatttttgtttgcatttttatttgtaaaatgATAAGAATGAAAT ATATCTGCACGTACGTCTACACTCTTTTAAAATGATATggtattttcaat ttaaaaatctagTCATCAATGTTGATTTTTAAAACCAGTGATCTTTTTTC ATAAACTT

Coding sequence (CDS) from alignment at sc0000002:575625..585982+

>TCONS_00000431 ID=TCONS_00000431|Name=TCONS_00000431|organism=Clytia hemisphaerica|type=CDS|length=2061bp|location=Sequence derived from alignment at sc0000002:575625..585982+ (Clytia hemisphaerica)
atgcAAGCACCACCAGCCTATAGTGAAAAATCACAAGATCCATATGCGCC
ACCACCAGGCCAACCGTATCCTCCACAACAACCAGGATACCCACCCACCA
GCCAACCTGGTTATCCACCAACTAGTCAACCTGGTTATGCACCACCACCA
GGAGCCTATCCACCCCCTGGTGCCTACCCACCACCACAACAAGCAGGATA
TCAACAACAATATGCTCCACCACCTGGTCCACCACCAATGGCTACCAACC
AGGCCGTCCACCAGCAAACCACAGTAATCACCACACAGCCAACAACACAA
GTCCTAGCTGTTAGTTTTGGTGAAATGCCTACTTCATGCACATGTCCTCA
TTGTCAAGCACAAATTGTGACCGCTGTTCATTATGAAGCTGGTTCCCTTG
CATGGATCATTTGTTGTGTCCTTTTGTTTGTCTTCTGGCCTTTGATGTGT
CTGCCGTTCTGTTTGACTTCATTGCAAGATGCTGTTCACACATGTCCTAA
TTTTTGTGGAAGTTTTGTTTCAACAGTGGATCACCTTTCAACCTCAAAAA
TCACTCTTTCTCGAAAGGGAAATTCCTGTACTTGCTCTCAAATCAAAAGT
CTAATCACCCAATCAGTAGAATTAACTCCCTTCATATTTTATAGTTCAAT
AAAGCTTTTATTAATTTGTGTATTATTACTGAAATGAatgcAAGCACCAC
CAGCCTATAGTGAAAAATCACAAGATCCATATGCGCCACCACCAGGCCAA
CCGTATCCTCCACAACAACCAGGATACCCACCCACCAGCCAACCTGGTTA
TCCACCAACTAGTCAACCTGGTTATGCACCACCACCAGGAGCCTATCCAC
CCCCTGGTGCCTACCCACCACCACAACAAGCAGGATATCAACAACAATAT
GCTCCACCACCTGGTCCACCACCAATGGCTACCAACCAGGCCGTCCACCA
GCAAACCACAGTAATCACCACACAGCCAACAACACAAGTCCTAGCTGTTA
GTTTTGGTGAAATGCCTACTTCATGCACATGTCCTCATTGTCAAGCACAA
ATTGTGACCGCTGTTCATTATGAAGCTGGTTCCCTTGCATGGATCATTTG
TTGTGTCCTTTTGTTTGTCTTCTGGCCTTTGATGTGTCTGCCGTTCTGTT
TGACTTCATTGCAAGATGCTGTTCACACATGTCCTAATTTTTGTGGAAGT
TTTGTTTCAACAGTGGATCACCTTTCAACCTCAAAAATCACTCTTTCTCG
AAAGGGAAATTCCTGTACTTGCTCTCAAATCAAAAGTCTAATCACCCAAT
CAGTAGAATTAACTCCCTTCATATTTTATAGTTCAATAAAGCTTTTATTA
ATTTGTGTATTATTACTGAAATGAatgcAAGCACCACCAGCCTATAGTGA
AAAATCACAAGATCCATATGCGCCACCACCAGGCCAACCGTATCCTCCAC
AACAACCAGGATACCCACCCACCAGCCAACCTGGTTATCCACCAACTAGT
CAACCTGGTTATGCACCACCACCAGGAGCCTATCCACCCCCTGGTGCCTA
CCCACCACCACAACAAGCAGGATATCAACAACAATATGCTCCACCACCTG
GTCCACCACCAATGGCTACCAACCAGGCCGTCCACCAGCAAACCACAGTA
ATCACCACACAGCCAACAACACAAGTCCTAGCTGTTAGTTTTGGTGAAAT
GCCTACTTCATGCACATGTCCTCATTGTCAAGCACAAATTGTGACCGCTG
TTCATTATGAAGCTGGTTCCCTTGCATGGATCATTTGTTGTGTCCTTTTG
TTTGTCTTCTGGCCTTTGATGTGTCTGCCGTTCTGTTTGACTTCATTGCA
AGATGCTGTTCACACATGTCCTAATTTTTGTGGAAGTTTTGTTTCAACAG
TGGATCACCTTTCAACCTCAAAAATCACTCTTTCTCGAAAGGGAAATTCC
TGTACTTGCTCTCAAATCAAAAGTCTAATCACCCAATCAGTAGAATTAAC
TCCCTTCATATTTTATAGTTCAATAAAGCTTTTATTAATTTGTGTATTAT
TACTGAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000279XLOC_000279Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000431-proteinTCONS_00000431-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000431-exon-sc0000002-1491911889:575625..575688TCONS_00000431-exon-sc0000002-1491911889:575625..575688Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1510915933:575625..575688TCONS_00000431-exon-sc0000002-1510915933:575625..575688Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1575043694:575625..575688TCONS_00000431-exon-sc0000002-1575043694:575625..575688Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1491911889:584216..584665TCONS_00000431-exon-sc0000002-1491911889:584216..584665Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1510915933:584216..584665TCONS_00000431-exon-sc0000002-1510915933:584216..584665Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1575043694:584216..584665TCONS_00000431-exon-sc0000002-1575043694:584216..584665Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1491911889:584987..585057TCONS_00000431-exon-sc0000002-1491911889:584987..585057Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1510915933:584987..585057TCONS_00000431-exon-sc0000002-1510915933:584987..585057Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1575043694:584987..585057TCONS_00000431-exon-sc0000002-1575043694:584987..585057Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1491911889:585607..585982TCONS_00000431-exon-sc0000002-1491911889:585607..585982Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1510915933:585607..585982TCONS_00000431-exon-sc0000002-1510915933:585607..585982Clytia hemisphaericaexon
TCONS_00000431-exon-sc0000002-1575043694:585607..585982TCONS_00000431-exon-sc0000002-1575043694:585607..585982Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:575625..585982 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.5695 45.0928 200.605 208.479 26.7529 18.3982 30.5041 40.1319 103.29 150.071 105.323 71.7016 148.352 143.599 127.811 154.795 124.999 115.191 124.885 168.292 129.484 143.202 66.4356 71.6483 43.4158 50.3535 117.671 132.77 107.646 96.5709
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006629LITAF
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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