TCONS_00000422-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000422-protein
Unique NameTCONS_00000422-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length208

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000422-protein ID=TCONS_00000422-protein|Name=TCONS_00000422-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
MKFHERCGKSISFSKTRDCAERKEGYDNGIVFSCKPLKKSQIFEVKIDAI
EEKWAGSIRLGVTTADPNDLPYFRTVTDIHSSSEHNSMFWVCCGSKLFHG
SQEFAINKSLYGLSGVSDIIGIQVRQNGQMHTYKNGVHVENVAEGLPVDV
DLYVIVDIYGAVTKVSCLQDKVLSLKEHSRRVIQNIIKDENDIDDLNIPK
VLKVFLKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000274XLOC_000274Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000422TCONS_00000422Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006573NHR_dom
IPR024048VHL_alpha_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006573Neuralized homology repeat (NHR) domainSMARTSM0058827bcoord: 1..114
e-value: 6.9E-11
score: 52.2
IPR006573Neuralized homology repeat (NHR) domainPFAMPF07177Neuralizedcoord: 3..168
e-value: 3.2E-36
score: 124.5
IPR006573Neuralized homology repeat (NHR) domainPROSITEPS51065NHRcoord: 1..170
score: 32.837
IPR024048von Hippel-Lindau disease tumour suppressor, alpha domainGENE3D1.10.750.10coord: 171..207
e-value: 2.5E-4
score: 20.4
NoneNo IPR availableCDDcd12887SPRY_NHR_likecoord: 2..166
e-value: 9.70178E-43
score: 142.256

Blast
BLAST of TCONS_00000422-protein vs. Swiss-Prot (Human)
Match: NEUL4 (Neuralized-like protein 4 OS=Homo sapiens GN=NEURL4 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.049e-25
Identity = 63/190 (33.16%), Postives = 107/190 (56.32%), Query Frame = 0
Query:    3 FHERCGKSISFSKTRDCAERK---EGYDNGIVFSCKPLKKSQIFEVKIDAIEEKWAGSIRLGVTTADPNDLPYFRTVTDIHSSSEHNSMFWVCCGSKLFHGSQ----EFAINKSLYGLSGVSDIIGIQVRQNGQMHTYKNGVHVENVAEGLPVDVDLYVIVDIYGAVTKVSCLQDKVLSLKEHSRRVIQN 185
            FHE+CG  I  S     AER+   + ++NG+V + +PL+ +++FE++ID + +KW+GSI +GVTT +PN L Y  T+T++ S +   S   +    K   G++    EF++++   G     D IG+  + N  +H + NG+  + VA  L   V +Y +VD+YG   KV+ + +       HS R+ +N
Sbjct:  320 FHEKCGTLIKLSNNNKTAERRRPLDEFNNGVVMTNRPLRDNEMFEIRIDKLVDKWSGSIEIGVTTHNPNSLEYPATMTNLQSGTIMMSGCGILTNGK---GTRREYCEFSLDELQEG-----DHIGLTRKSNSALHFFINGID-QGVATPLTPPV-VYGVVDLYGMAVKVTIVHN-----NNHSDRLRRN 494          

HSP 2 Score: 85.5001 bits (210), Expect = 2.331e-19
Identity = 50/173 (28.90%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    3 FHERCGKSISFSKTRDCAERKEGYDN---GIVFSCKPLKKSQIFEVKIDAIEEKWAGSIRLGVTTADPNDLPYFRTVTDIHSSSEHNSMFWVCCGSKLFHGSQEFAINKSLYGLSGVS--DIIGIQVRQNGQMHTYKNGVHVENVAEGLPVDVDLYVIVDIYGAVTKVSCLQD 170
            FH  CG+  + +     A R    D+   G+V S + L+  ++F+V+ID + +KWAGSI +GVTT +P  L    T+T++ S +      W+  G+ + H      +++  + L  +   D +G+  R++G +H + NG+     A  +P  V  Y +VD+YG   + + + D
Sbjct:  523 FHPNCGQKAAITHEGRTALRPHATDDFNHGVVLSSRALRDGEVFQVRIDKMVDKWAGSIEIGVTTHNPAYLQLPSTMTNLRSGT------WMMTGNGVMHNGTTI-LDEYGHNLDRLKAGDTVGVVRREDGTLHFFVNGMTQGPAAWNVPPGV--YAVVDLYGQAAQATIVDD 686          

HSP 3 Score: 76.6406 bits (187), Expect = 2.228e-16
Identity = 50/174 (28.74%), Postives = 84/174 (48.28%), Query Frame = 0
Query:    2 KFHERCGKSISFSKTRDCAERKE---GYDNGIVFSCKPLKKSQIFEVKIDAIEEKWAGSIRLGVTTADPNDLPYFRTVTDIHSSSEHNSMFWVCCGSKLFHGSQEFAINKSLYGLS----GVSDIIGIQVRQNGQMHTYKNGVHVENVAEGLPVDVDLYVIVDIYGAVTKVSCL 168
            + H R G+ +S S     A R++    +++G+V S +PL+  ++F V+ID     W+GSI +GVT  DP+ L +  + T +   S      WV  G  +    +        YG      G  D +G++    G++  + NG      A GLP  V  + +VD+YG  T+++ L
Sbjct:   43 ELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVLDFPSSATGLKGGS------WVVSGCSVLRDGRSVL---EEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCGVAATGLPPRV--WAVVDLYGKCTQITVL 205          

HSP 4 Score: 76.2554 bits (186), Expect = 2.993e-16
Identity = 48/173 (27.75%), Postives = 80/173 (46.24%), Query Frame = 0
Query:    1 MKFHERCGKSISFSKTRDCAER---KEGYDNGIVFSCKPLKKSQIFEVKIDAIEEKWAGSIRLGVTTADPNDLPYFRTVTDIHSSSEHNSMFWVCCGSKLFHGSQEFAINKSLYGLS----GVSDIIGIQVRQNGQMHTYKNGVHVENVAEGLPVDVDLYVIVDIYGAVTKVS 166
            ++FH+  G +   +     A R   +  +++ IV S + L+  ++FE+ I  + ++W+GSI  GVT   P DL +  T+TDI   +      W+  G+ +         N   YG      G    IG+     G +H + NG        GLP   ++Y +VD+YG   +VS
Sbjct:  717 LRFHQLHGSNAVITNGGRTALRHNCRSEFNDAIVISNRALRDGELFEIVIQKMVDRWSGSIEAGVTAIRPEDLEFPNTMTDIDYDT------WMLSGTAIMQDGNTMRNN---YGCDLDALGTGARIGMMRTAKGDLHYFINGQDQGAACSGLPPGKEVYAVVDLYGQCVQVS 880          
The following BLAST results are available for this feature:
BLAST of TCONS_00000422-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEUL44.049e-2533.16Neuralized-like protein 4 OS=Homo sapiens GN=NEURL... [more]
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