TCONS_00000263-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000263-protein
Unique NameTCONS_00000263-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1004

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000263-protein ID=TCONS_00000263-protein|Name=TCONS_00000263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1004bp
MAPISLKKGAVDILAGELIMHILQIERKSENFKISMEYVMSNFRFNRFLD
VNSLDVSRSLTGLCSKFRVNSFDKKADYLEKKVEEFINLPLLEIDEKDNR
EVQTDAHYALLAFLMKLSNNPLNCEFKPKEEPKPVKEENTFNWTKYLLLG
EEPLEIGANIDSDLEDDLYDSDNEIWQLSEDEDSAEDDEAQHLYDEVSEI
QKQLKKFTEVNQYVEEKDWLREKVVPAYWIESEKSTFPFHVQGMKYINSN
NQMCNNWELYKNQFTKVSNDPQLLSEKILVRETVWMLLGLENLHVYKFTG
TKYDVNEDIVITHLTKETLSKFLTSFTEVGTKVVLLKRFTELCAQKYSEI
PKTIQAFGYTISKYLSNRRETLIDLEKTLMEKDNATTLLTLKDDLADDIS
KVNFIYKIYNHAVVEGHEKYFTVTERVVHFLDVFYDFVCTLDNMGDSGTE
KMMLVLPMFLEVCRPYLEDVGCWMATGQLPRDEEFMIYRTQNQVQGETRY
WHELFLIRENRSTDGKSSKLVPRFLEKLQKQILVSGKSLGLLEEFVEFTS
TVVATDSLYEEFKRSLKINIQKSNERYRHTHALDSTDHIPGDAVSEYISD
SGIDPLLRANFHIMFNNVYQRMKTNKEQIAVESGKEEIQDLAILLRDCSC
RPPMKRIIDQSLSPVVLGRYGKACVVLLELFKKEMKFLDHLAVMKNFFLM
QATGEMYEFYTDIFEKAKHGRYWRDMSYLNIVLQDALQVNYPKLMGNLTV
DYYSSKNNLSNAQLFDGLSLHYKVPWPVSIVLDQHAEDKYNEVFRFLFKV
KRAIWVLEQLRFQELVYQCSDSQDHSDSEDEGIDYNTTTSTTRRGLKQHV
LKDMILSGAHQKLKNRILVLRMKMLHVVRSFHFYLMTRIDDSIHQEFRVE
SARDLDEILEFHQKFLFSLRQRCFLHEKVARTKDALVRILNLSFELEELW
RSSVAVLNVNQLMALEKEFFRCTSFLHSFFTTLSKRGSFPHFEFLATTMK
FESR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000142XLOC_000142Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000263TCONS_00000263Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007259GCP
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0007020 microtubule nucleation
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0000922 spindle pole
molecular_function GO:0043015 gamma-tubulin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007259Gamma-tubulin complex component proteinPFAMPF04130Spc97_Spc98coord: 282..924
e-value: 4.1E-78
score: 263.4
NoneNo IPR availableGENE3D1.20.900.10coord: 669..980
e-value: 0.0015
score: 17.7

Blast
[Close]
BLAST of TCONS_00000263-protein vs. Swiss-Prot (Human)
Match: GCP5 (Gamma-tubulin complex component 5 OS=Homo sapiens GN=TUBGCP5 PE=1 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 1.170e-128
Identity = 303/1046 (28.97%), Postives = 525/1046 (50.19%), Query Frame = 0 
Query:   17 ELIMHILQIERKSE-NFKISMEYVMSNFRFNRFLDVNSLDVSRSLTGLCSKFRVNSFDKKADYLEKKVEEFINLPLLEIDEKDNREVQTDAHYALLAFLMKLSNNPLNCEFKPKEEPKPVKEENTFNWTKYLLLGEEPLEIGANIDSDLEDDLYDSDNEIWQLSEDEDSAEDDEAQHLYDEVSEIQKQLKKFTEVNQYVEEKD---WLREKVVPAYWIESEKSTFPFHVQGMKYINSNNQMCNNWELYKNQFTKVSNDPQLLSEKILVRETVWMLLGLENLHVYKFTGTKYDVNEDIVITHLTKETLSKFLTSFTEVGTKVVLLKRFTE---------------LCAQKYSEIP-KTIQAFGYTISKYLSNRRETLIDLEKTLMEKDNATTLLTLKDDLADDISKVNFIYKIYNHAVVEGHEKYFTVTERVVHFLDVFYDFVCTLDNMGDSGTEKMMLVLPMFLEVCRPYLEDVGCWMATGQL-PRDEEFMIYRTQNQVQGETRYWHELFLI------RENR------------STDGKSSK--LVPRFLEKLQKQILVSGKSLGLLEEFVEFTSTVVATDSLYEEFKRSLKINIQKSNERYRHTHALDSTDHIPGDAVS--------EYISDSGI------DPLLRANFHIMF---NNVYQRMKTNKEQIAVESGKEEIQDLAILLRDCSCRPPMKRIIDQSLSPVVLGRYGKACVVLLELFKKEMKFLDHLAVMKNFFLMQATGEMYEFYTDIFEKAKHGRYWRDMSYLNIVLQDALQVNYPKLMGNLTVDYY---SSKNNLSNAQLFDGLSLHYKVPWPVSIVLDQHAEDKYNEVFRFLFKVKRAIWVLEQLRFQELVYQCSDSQDHSDSEDEGIDYNTTTSTTRRGLKQHVLKDMILSGAHQKLKNRILVLRMKMLHVVRSFHFYLMTRIDDSIHQEFR--VESARDLDEILEFHQKFLFSLRQRCFLHEKVARTKDALVRILNLSFELEELWRSSVAVLNVNQLMALEKEFFRCTSFLHSFFTTLSKRGSFPHFEFLATTM 999
            EL+  +  ++ +++ NF++++ +  SNFRF+RFLDVNS  + +++ G+  KF ++S   KA   ++  EEF+N PL  I     +E++TDAHY++L+ L+ LS++P N  +      K V++++ F+W KYL+  EE ++IG  +D+    +  + +N+   LS ++   + D          E Q Q +K      + +E D   WL   VV  YW  +  S FP  +    +++SN     +  LY +    V +D  L++E  ++RET+W+L G++ L +++    K  V  +I++THLT   L   L      G  V  L+ F +                  +K +E P +T QAF + + KY  + +E L ++EK ++  D   TL  + D LA  +S++  ++K+++  V E       V  R  H L+  Y  +   DN+G++  + + L+  +++E  RPYL+ V  W+  G L     EF+I R +N       +W+  + +       EN             S  G SS+   +  FL+ + KQI+++GKS+ LL+      ST     +   E K    + ++    R RH    DST  +  +  +        + I++S +      DPLL  NF  M+   ++ +++       +   S     Q   + LR C             L P +  +Y   C  L++  KK+ + +++L  M+NFFLM+    MY+FYT IF+K +    W+++S+LN+ LQ+A+   YP+    L++ +    ++K  L    + DGL+L YKVPWPV IV+    +  YN+VF  L ++K A + L+ L F ELV     S        EG+ +   T   + G ++  ++  I         +R+ +LR+K++H V S H Y+MTRI  S   EF+  VE A+DLD++++ H ++L ++  RC L EKV+  K+A++++LNL+    + W++ +    +  +  +E +F  C  FL +       RGSFPH E LA ++
Sbjct:   21 ELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHKIEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSI-----KEIKTDAHYSILSLLLCLSDSPSNSSYVETPRNKEVEKKDDFDWGKYLMEDEE-MDIGPYMDTPNWSEESEEENDQQPLSREDSGIQVDRTP------LEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWT-ARPSQFPHSL----HLHSNLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNIIVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRTYQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGVAEVPPDTRNVV-RASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWIVHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQGPSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESVQSRLRHGE--DSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDFHEKFAGGDVCVDRSSESVTCQTFELTLRSC-------------LYPHIDKQYLDCCGNLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSISFENVDTAKKKLP-VHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFGELV-----STAEKPRLKEGLIHEQDT-VAQFGPQKEPVRQQI---------HRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSL 1017
The following BLAST results are available for this feature:
BLAST of TCONS_00000263-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GCP51.170e-12828.97Gamma-tubulin complex component 5 OS=Homo sapiens ... [more]
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