TCONS_00000263-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000263-protein
Unique NameTCONS_00000263-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1004

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000263-protein ID=TCONS_00000263-protein|Name=TCONS_00000263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1004bp
MAPISLKKGAVDILAGELIMHILQIERKSENFKISMEYVMSNFRFNRFLD
VNSLDVSRSLTGLCSKFRVNSFDKKADYLEKKVEEFINLPLLEIDEKDNR
EVQTDAHYALLAFLMKLSNNPLNCEFKPKEEPKPVKEENTFNWTKYLLLG
EEPLEIGANIDSDLEDDLYDSDNEIWQLSEDEDSAEDDEAQHLYDEVSEI
QKQLKKFTEVNQYVEEKDWLREKVVPAYWIESEKSTFPFHVQGMKYINSN
NQMCNNWELYKNQFTKVSNDPQLLSEKILVRETVWMLLGLENLHVYKFTG
TKYDVNEDIVITHLTKETLSKFLTSFTEVGTKVVLLKRFTELCAQKYSEI
PKTIQAFGYTISKYLSNRRETLIDLEKTLMEKDNATTLLTLKDDLADDIS
KVNFIYKIYNHAVVEGHEKYFTVTERVVHFLDVFYDFVCTLDNMGDSGTE
KMMLVLPMFLEVCRPYLEDVGCWMATGQLPRDEEFMIYRTQNQVQGETRY
WHELFLIRENRSTDGKSSKLVPRFLEKLQKQILVSGKSLGLLEEFVEFTS
TVVATDSLYEEFKRSLKINIQKSNERYRHTHALDSTDHIPGDAVSEYISD
SGIDPLLRANFHIMFNNVYQRMKTNKEQIAVESGKEEIQDLAILLRDCSC
RPPMKRIIDQSLSPVVLGRYGKACVVLLELFKKEMKFLDHLAVMKNFFLM
QATGEMYEFYTDIFEKAKHGRYWRDMSYLNIVLQDALQVNYPKLMGNLTV
DYYSSKNNLSNAQLFDGLSLHYKVPWPVSIVLDQHAEDKYNEVFRFLFKV
KRAIWVLEQLRFQELVYQCSDSQDHSDSEDEGIDYNTTTSTTRRGLKQHV
LKDMILSGAHQKLKNRILVLRMKMLHVVRSFHFYLMTRIDDSIHQEFRVE
SARDLDEILEFHQKFLFSLRQRCFLHEKVARTKDALVRILNLSFELEELW
RSSVAVLNVNQLMALEKEFFRCTSFLHSFFTTLSKRGSFPHFEFLATTMK
FESR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000142XLOC_000142Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000263TCONS_00000263Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007259GCP
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0007020 microtubule nucleation
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0000922 spindle pole
molecular_function GO:0043015 gamma-tubulin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
1002003004005006007008009001000Expect = 4.1E-78 / Score = 263.4Expect = 0.0015 / Score = 17.7SequencePF04130G3DSA:1.20.900.10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007259Gamma-tubulin complex component proteinPFAMPF04130Spc97_Spc98coord: 282..924
e-value: 4.1E-78
score: 263.4
NoneNo IPR availableGENE3D1.20.900.10coord: 669..980
e-value: 0.0015
score: 17.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000263-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MAPISLKKGAVDILAGELIMHILQIERKSENFKISMEYVMSNFRFNRFLDVNSLDVSRSLTGLCSKFRVNSFDKKADYLEKKVEEFINLPLLEIDEKDNREVQTDAHYALLAFLMKLSNNPLNCEFKPKEEPKPVKEENTFNWTKYLLLGEEPLEIGANIDSDLEDDLYDSDNEIWQLSEDEDSAEDDEAQHLYDEVSEIQKQLKKFTEVNQYVEEKDWLREKVVPAYWIESEKSTFPFHVQGMKYINSNNQMCNNWELYKNQFTKVSNDPQLLSEKILVRETVWMLLGLENLHVYKFTGTKYDVNEDIVITHLTKETLSKFLTSFTEVGTKVVLLKRFTELCAQKYSEIPKTIQAFGYTISKYLSNRRETLIDLEKTLMEKDNATTLLTLKDDLADDISKVNFIYKIYNHAVVEGHEKYFTVTERVVHFLDVFYDFVCTLDNMGDSGTEKMMLVLPMFLEVCRPYLEDVGCWMATGQLPRDEEFMIYRTQNQVQGETRYWHELFLIRENRSTDGKSSKLVPRFLEKLQKQILVSGKSLGLLEEFVEFTSTVVATDSLYEEFKRSLKINIQKSNERYRHTHALDSTDHIPGDAVSEYISDSGIDPLLRANFHIMFNNVYQRMKTNKEQIAVESGKEEIQDLAILLRDCSCRPPMKRIIDQSLSPVVLGRYGKACVVLLELFKKEMKFLDHLAVMKNFFLMQATGEMYEFYTDIFEKAKHGRYWRDMSYLNIVLQDALQVNYPKLMGNLTVDYYSSKNNLSNAQLFDGLSLHYKVPWPVSIVLDQHAEDKYNEVFRFLFKVKRAIWVLEQLRFQELVYQCSDSQDHSDSEDEGIDYNTTTSTTRRGLKQHVLKDMILSGAHQKLKNRILVLRMKMLHVVRSFHFYLMTRIDDSIHQEFRVESARDLDEILEFHQKFLFSLRQRCFLHEKVARTKDALVRILNLSFELEELWRSSVAVLNVNQLMALEKEFFRCTSFLHSFFTTLSKRGSFPHFEFLATTMKFESR1002003004005006007008009001000Expect = 1.17e-128 / Id = 28.97SequenceGCP5
Match NameE-valueIdentityDescription
GCP51.170e-12828.97Gamma-tubulin complex component 5 OS=Homo sapiens ... [more]
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