TCONS_00000260-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000260-protein
Unique NameTCONS_00000260-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length431

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000260-protein ID=TCONS_00000260-protein|Name=TCONS_00000260-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MASVLRAASRTLSHSKVILKNKTSLYSLKGNISTTSKLLVAGIDDDLFDL
TEEQKEFRQTVHDFCTKELGPHADQIDKDNGWSDLRDFWKKLGEMGLHGI
TVPEADGGLGLGYFEHLIAMEEMSRQSAALALSYGAHSNLCINQIARNGN
EDQKAKYLPKLISGEHFGSLAMSETGSGSDVVSMKMKAEKQGDYYILNGN
KFWITNAPDADTLVVYARTDSSGKPEHGVTTFLIERGMEGFSTMPKLDKL
GMRGSNTAELFFEDCKVPASNIMGELNKGIYVLFSGLDIERLLLSGGPLG
IMQAVIDLAFPYAHMRKQFNRPIGSFQLLQGKMADMYVELSACRAYVYSV
ARALDKGHLISKDCAGSILYSAEKCTQMALEGIQILGGNGYINDYPSGRY
LRDAKLYEIGAGTQEIRRWLIGRRLNEEYSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000141XLOC_000141Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000260TCONS_00000260Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013786AcylCoA_DH/ox_N
IPR009075AcylCo_DH/oxidase_C
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR006089Acyl-CoA_DH_CS
IPR034183IVD
IPR009100AcylCoA_DH/oxidase_NM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0003995acyl-CoA dehydrogenase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003995 acyl-CoA dehydrogenase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalPFAMPF02771Acyl-CoA_dh_Ncoord: 51..165
e-value: 2.8E-36
score: 124.5
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalGENE3D1.10.540.10coord: 43..167
e-value: 4.9E-40
score: 136.2
NoneNo IPR availableGENE3D2.40.110.10coord: 168..264
e-value: 5.5E-37
score: 125.6
NoneNo IPR availableGENE3D1.20.140.10coord: 265..431
e-value: 3.1E-50
score: 169.7
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 277..425
e-value: 2.9E-37
score: 128.1
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 275..428
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 169..265
e-value: 1.4E-24
score: 86.0
IPR006089Acyl-CoA dehydrogenase, conserved sitePROSITEPS00073ACYL_COA_DH_2coord: 384..403
IPR006089Acyl-CoA dehydrogenase, conserved sitePROSITEPS00072ACYL_COA_DH_1coord: 171..183
IPR034183Isovaleryl-CoA dehydrogenaseCDDcd01156IVDcoord: 49..426
e-value: 0.0
score: 677.592
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainSUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 48..288

Blast
[Close]
BLAST of TCONS_00000260-protein vs. Swiss-Prot (Human)
Match: IVD (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD PE=1 SV=1)

HSP 1 Score: 549.28 bits (1414), Expect = 0.000e+0
Identity = 257/403 (63.77%), Postives = 319/403 (79.16%), Query Frame = 0 
Query:   28 LKGNISTTSKLLVAGIDDDLFDLTEEQKEFRQTVHDFCTKELGPHADQIDKDNGWSDLRDFWKKLGEMGLHGITVPEADGGLGLGYFEHLIAMEEMSRQSAALALSYGAHSNLCINQIARNGNEDQKAKYLPKLISGEHFGSLAMSETGSGSDVVSMKMKAEKQGDYYILNGNKFWITNAPDADTLVVYARTDSSGKP-EHGVTTFLIERGMEGFSTMPKLDKLGMRGSNTAELFFEDCKVPASNIMGELNKGIYVLFSGLDIERLLLSGGPLGIMQAVIDLAFPYAHMRKQFNRPIGSFQLLQGKMADMYVELSACRAYVYSVARALDKGHLISKDCAGSILYSAEKCTQMALEGIQILGGNGYINDYPSGRYLRDAKLYEIGAGTQEIRRWLIGRRLNEEY 429
            L G +S  +  L+  +DD +  L+EEQ++ RQT+  F  + L P A +ID+ N + +LR+FWK+LG +G+ GIT P   GG GLGY EH++ MEE+SR S A+ LSYGAHSNLCINQ+ RNGNE QK KYLPKLISGE+ G+LAMSE  +GSDVVSMK+KAEK+G++YILNGNKFWITN PDAD L+VYA+TD +  P   G+T F++E+GM GFST  KLDKLGMRGSNT EL FEDCK+PA+NI+G  NKG+YVL SGLD+ERL+L+GGPLG+MQAV+D   PY H+R+ F + IG FQL+QGKMADMY  L ACR YVY+VA+A D+GH  +KDCAG ILYSAE  TQ+AL+GIQ  GGNGYIND+P GR+LRDAKLYEIGAGT E+RR +IGR  N ++
Sbjct:   21 LAGFVSQRAHSLLP-VDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 422
The following BLAST results are available for this feature:
BLAST of TCONS_00000260-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IVD0.000e+063.77Isovaleryl-CoA dehydrogenase, mitochondrial OS=Hom... [more]
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