TCONS_00000066-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000066-protein
Unique Name	TCONS_00000066-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	330

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000066-protein ID=TCONS_00000066-protein|Name=TCONS_00000066-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MLEQQNARTLLLITSTVIYMLLGAAVFSALEYDEHIRQKSKYRNIYNLLQ
KKYNMTIEDVEELANYLHKRRSLYHSLDPWSFAGSVYFTSVTITTIGYGH
SVPQTISGQIFCMLYACIGIPLNLTMFQAIGERMGVFMSYILRRTKRCLG
MKSTEVNLVHLVAFGVMIWFVFQCLGAAVFSYYETWSFFRSLYYFFVTLT
TIGFGDLVALQEIKKKHPDNNGYYNQNLYVALTMILIYIGLTIASSVINL
LVMRLMELQQPKRRRRNVSWKNGTKCKHCKSNKATACVEEVANSVMENHS
VMILQNFEEELEFTSYRQVHETEDGGTPPY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000033	XLOC_000033	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000066	TCONS_00000066	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003092	2pore_dom_K_chnl_TASK
IPR003280	2pore_dom_K_chnl
IPR013099	K_chnl_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005267	potassium channel activity

Vocabulary: **Biological Process**
Term	Definition
GO:0071805	potassium ion transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071805	potassium ion transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005267	potassium channel activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003092	Two pore domain potassium channel, TASK family	PRINTS	PR01095	TASKCHANNEL	coord: 232..246 score: 30.41 coord: 12..34 score: 49.95 coord: 124..140 score: 46.2
IPR003092	Two pore domain potassium channel, TASK family	PIRSF	PIRSF038061	K(+)	coord: 2..324 e-value: 2.6E-81 score: 271.1
IPR003280	Two pore domain potassium channel	PRINTS	PR01333	2POREKCHANEL	coord: 200..209 score: 74.26 coord: 91..119 score: 48.84
IPR013099	Potassium channel domain	PFAM	PF07885	Ion_trans_2	coord: 168..256 e-value: 2.1E-15 score: 56.3 coord: 74..134 e-value: 2.3E-17 score: 62.6
None	No IPR available	GENE3D	1.10.287.70		coord: 143..267 e-value: 4.2E-20 score: 70.8
None	No IPR available	GENE3D	1.10.287.70		coord: 4..142 e-value: 6.1E-26 score: 89.5
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 144..271
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 76..148 coord: 8..35

Blast

[Close]

BLAST of TCONS_00000066-protein vs. Swiss-Prot (Human)
Match: KCNK9 (Potassium channel subfamily K member 9 OS=Homo sapiens GN=KCNK9 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.008e-73
Identity = 115/264 (43.56%), Postives = 163/264 (61.74%), Query Frame = 0

Query:    2 LEQQNARTLLLITSTVIYMLLGAAVFSALEYDEHIRQKSKYRNIYNLLQKKYNMTIEDVEELANYLHKRRSLYHSLDPWSFAGSVYFTSVTITTIGYGHSVPQTISGQIFCMLYACIGIPLNLTMFQAIGERMGVFMSYILRRTKRCLGMKSTEVNLVHLVAFGVMIWFVFQCLGAAVFSYYETWSFFRSLYYFFVTLTTIGFGDLVALQEIKKKHPDNNGYYNQNLYVALTMILIYIGLTIASSVINLLVMRLMELQQPKRRR 265
            +++QN RTL LI  T  Y+L+GAAVF ALE D  +R++ K +     ++ KYN++ ED  +L   + +       +  W FAGS YF    ITTIGYGH+ P T +G+ FCM YA +GIPL L MFQ++GERM  F+ Y+L+R K+C GM++T+V++ ++V  G        C+GAA FS  E WSFF + YY F+TLTTIGFGD VALQ              + LYVA + + I +GLT+  + +NL+V+R + +     RR
Sbjct:    1 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYRQLELVILQSEPHRAGVQ-WKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTIGFGDYVALQ-------TKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERR 256

The following BLAST results are available for this feature:

BLAST of TCONS_00000066-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000066-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KCNK9	8.008e-73	43.56	Potassium channel subfamily K member 9 OS=Homo sap...	[more]

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TCONS_00000066-protein (polypeptide) - C. hemisphaerica