TCONS_00000037-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000037-protein
Unique NameTCONS_00000037-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length456

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000037-protein ID=TCONS_00000037-protein|Name=TCONS_00000037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
MGSLLSLIGIGSAASCLPSIGGCAASQIACCCGSAACSLCCKACPSCQNS
TASRIGYTLVLLLGFILSCVMLSPNIRQKLNKVPHLCPTFDCDQVVGYVA
VYRVCFAMFAFFFIMALITFKIRNSKDPRASIHNGFWAIKLLVFIALLVG
AFYIPKGDFSRVWMYIGMIGGFLFILIQLVLLIDFAYSWSQKWIGKYEET
DNKIWFIGLAVCTGGLYAIALAITICGFIFYTKTSGCGLNKFFLSFNFII
AVLLSLISIHPRVQESQPTSGLLQASIISAYSMYLTLSAMSNEPGTDCNP
GSSFLQSDSFAPGFDTQTVLAAIFLFCTVVYSCVRTSAKSSSLSIQSDDA
DIEEVLLIENNGQGDDDVEYKGQKVYDNESTEVAYNYSFFHFTYALASLY
IMMMLTNWYSPEGANFKTLTSSMATVWVKMASSWACFVLFGWTLVAPMLF
PDREFH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000024XLOC_000024Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000037TCONS_00000037Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 30..454
e-value: 1.5E-164
score: 547.9

Blast
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BLAST of TCONS_00000037-protein vs. Swiss-Prot (Human)
Match: SERC3 (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=2 SV=2)

HSP 1 Score: 382.489 bits (981), Expect = 2.464e-129
Identity = 204/468 (43.59%), Postives = 281/468 (60.04%), Query Frame = 0 
Query:   25 ASQIACCCGSAACSLCCKACPSCQNSTASRIGYTLVLLLGFILSCVMLSPNIRQKLNKVPHLCP------------TFDCDQVVGYVAVYRVCFAMFAFFFIMALITFKIRNSKDPRASIHNGFWAIKLLVFIALLVGAFYIPKGDFSRVWMYIGMIGGFLFILIQLVLLIDFAYSWSQKWIGKYEETDNKIWFIGLAVCTGGLYAIALAITICGFIFYTKTSGCGLNKFFLSFNFIIAVLLSLISIHPRVQESQPTSGLLQASIISAYSMYLTLSAMSNEPGTDCNPG-SSF---LQSDSFAPGFDTQTVLAA-------------------IFLFCTVVYSCVRTSAKSSSLSIQSDDADIEEVLLIENNGQGDDDVEYKGQ--KVYDNESTEVAYNYSFFHFTYALASLYIMMMLTNWYSPEGANFKTLTSSMATVWVKMASSWACFVLFGWTLVAPMLFPDREF 455
            AS + C C  A+C L C  CP+ +NST +R+ Y  +LLL  ++S +M    +   L K+P  C               DCD +VGY AVYR+ FAM  FFF+ +L+ FK++ SKD RA++HNGFW  K+   I ++VG+FYIP G FS VW  +GMIG  LFILIQLVLL+DFA+SW++ W+ + EE + ++W+  L   T   Y +++      + +YTK  GC  NKFF+S N I+ V+ S+ISIHP++QE QP SGLLQ+S+I+ Y+MYLT SAMSNEP   CNP   SF   + + + APG  T  V                      +F+ C ++YS +RTS  S    +    +D   V+L +    G  D E  GQ  +  DNE   V Y+YS FH    LASLYIMM LT+WYSP+ A F+++TS    VWVK++SSW C +L+ WTLVAP++   R+F
Sbjct:   11 ASWVPCLCSGASC-LLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLC-LLYSSIRTSTNSQVDKLTLSGSD--SVILGDTTTSGASD-EEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIMMTLTSWYSPD-AKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDF 472
The following BLAST results are available for this feature:
BLAST of TCONS_00000037-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SERC32.464e-12943.59Serine incorporator 3 OS=Homo sapiens GN=SERINC3 P... [more]
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