TCONS_00000014-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000014-protein
Unique Name	TCONS_00000014-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	304

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000014-protein ID=TCONS_00000014-protein|Name=TCONS_00000014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MSSHKAVEHTAANLDGLWTVIAKTRNFDNEVSSSKKAIVVIPGNPGLVEF
YELFMECLYKLKGIPIIGFSHAGHSPIHPYTDEPMRTPPLTLQEQIQHKK
DCVRQFIPDDCNIIFIGHSIGAYIILQLMDHIPERSLHGILLFPTITNMI
GTVDGKFWNLITSYLKLPLLWTAYFSSYLPYALQDVLIRWRAKWRQIDAP
IVPVCRRCVSWDVLSQGFRMVECELVEVKTLNPELSRIIRRYSNKLTVYY
GDGDAWTPFSFYEEFIQKFPEVKTFYGRDGFKHDFVLDSSEGVARLCNKF
IEKL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000008	XLOC_000008	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000014	TCONS_00000014	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029058	AB_hydrolase
IPR019363	LDAH

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820		coord: 7..304 e-value: 1.3E-21 score: 76.9
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 35..303
IPR019363	Lipid droplet-associated hydrolase	PFAM	PF10230	LIDHydrolase	coord: 35..286 e-value: 1.4E-50 score: 172.3

Blast

[Close]

BLAST of TCONS_00000014-protein vs. Swiss-Prot (Human)
Match: LDAH (Lipid droplet-associated hydrolase OS=Homo sapiens GN=LDAH PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.827e-29
Identity = 82/283 (28.98%), Postives = 130/283 (45.94%), Query Frame = 0

Query:   28 DNEVSSSKKAIVVIPGNPGLVEFYELFMECLYKL--KGIPIIGFSHAGHSPIHPYTDEPMRTPPLT----------LQEQIQHKKDCVRQFIPDDCNIIFIGHSIGAYIILQLMDHIPERS-LHGILLFPTITNMIGTVDGKFWNLITSYLKLPLLWTAY-FSSYLPYALQDVLIRWRAKWRQIDAPIVPVCRRCVSWDVLSQGFRMVECELVEVKTLNPELSRIIRRYSNKLTVYYGDGDAWTPFSFYEEFIQKFPEVKTFYGRDGFKHDFVLDSSEGVARL 296
            D  V   K  I +IPGNPG   FY  F + LY L  +  P+   SHAGH+ + P   + + T   +          L  QI+HK   +R  +P D  ++ IGHSIG+Y  LQ++  +PE   +   LLFPTI  M  + +G+    +  + +  L  T Y      P  ++ +LIR   +   ++    P+    +    L+    +   E++EV   + E    I+ +  KLT YYG  D W P  +YE+  + FPE           H F+   ++ +A +
Sbjct:   37 DQSVKRPKLLIFIIPGNPGFSAFYVPFAKALYSLTNRRFPVWTISHAGHA-LAPKDKKILTTSEDSNAQEIKDIYGLNGQIEHKLAFLRTHVPKDMKLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIATPLLCWFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEFSPL--NILEPFCLANAAYLGGQEMMEVVKRDDE---TIKEHLCKLTFYYGTIDPWCPKEYYEDIKKDFPEGDIRLCEKNIPHAFITHFNQEMADM 313

The following BLAST results are available for this feature:

BLAST of TCONS_00000014-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000014-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LDAH	6.827e-29	28.98	Lipid droplet-associated hydrolase OS=Homo sapiens...	[more]

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TCONS_00000014-protein (polypeptide) - C. hemisphaerica