XLOC_045850 (gene) - C. hemisphaerica

Overview
NameXLOC_045850
Unique NameXLOC_045850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_98:227577..231228-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045850 ID=XLOC_045850|Name=XLOC_045850|organism=Clytia hemisphaerica|type=gene|length=3652bp|location=Sequence derived from alignment at scaffold_98:227577..231228- (Clytia hemisphaerica)
ATCGACAATCAAAGAAATATTTTGAGTGGATCAGGTAGGGTAATTTATCA
TATATGATAAAAGTTTGTTCATCATTAAATTTTTCAAATTCAGAAGTAAA
GGGCTGCCATTCGCTTTAGAATGCTAAAAATATTTTCTTTCCTGTGGATT
AGAGTTTTACTCCATGGCCATACAGGAGGTTCTCTCAGCGGACCGTCAAC
TCACGCAATCACGCATATTTTTTTTCCCAATTCACCCATTATCTGTTCAC
ACAAAGTCTTTCTATTCACACTCACGCGTAATTTTGTTAAACTTTCACGC
ATTCACGCAGGTGAAAAAACCCTTTCACGCATTCACACAAACCGCTGGGA
GGGTCCAATACAATGAGGAGCTTTCGCTAATTTGGACTTCTATTTTAATC
TTTTTACAAATTGAACTCTTTCTCAGCTCCTCTCAAGGGGCAACCTGCTT
TAGATGCTCCCTATAAGTAGGAAATGTGGCTCCCCTTTGAGTTCGAAACT
GTACTTTTGTTTTAATTTTCAGATAATCTTCATTATGCAGATGTGGACAG
TGATTACGCTCATCCAACTATATGTCTCTGGCTCATTCTGTCGACAATTT
CTCAACAACATAGACGACGAAGACAGTTGGTATCCAATAGATTATTCGAG
CGAATCTTCTGCTGAACACTCTATTGAGGATGAAACATACAACAAATCAC
CATTTGTTTCAGAAAGAAGACAATATGCTGACCCTTTCCAAGAAAACGAT
ATGGAGCCAAACTTTTATGAAGAAATTGACGAAAATAAGATGGTGAGAAT
CACAGGCTACGAAAATATACCAGCAGTTCGTCCAACACAAAAACAAGATA
CAACAGAAACAGCCACTACAACTGCTGCCCCAACTACACCTCATTCCCAT
AAACCATCTCGCACTAACTCTACTGACCAAACAAAACCTGGAAATCTCGC
TAGAAAATTGCAAAATGAAGAAGAAGACCCGCTCTGGTTCAAAATACACA
CACGAAGACGTAATCATAACAAGAATATCAATATTAATCATAACTCGAAT
GTTAATATTAACTCGAACCATAATTCCAATTCGAATCACAACTCTAACAC
AAATGTCAATATCAACCGTAACTCAAACGTGAATAGCAACTCGAACCATA
ACTCGAACACAAACATCAACGTTAATCAAAACACTTTCAGACCTTTCTAC
ATTGGCAACTTCCCAAAACACTGGCATATGTGTGAGTTCTAGATATTTCT
GACATTTTCTCTTTTAGCTCTAATACGCACTCCGCAGAAATAATTCGAAA
CAGGGTTTTCATAGTGAGATTGTTACAGTGGGCGAAGTAAGGCAACAATC
TTGGAAATATCTTGAAAATATGATATTTCCATTATACATTTGTAAATATG
AAACTATGACTTTTCTATATTTCCAAAGTTTAGGAAATATGATATTTCCA
AAAGTTGGAAATATTTTGAAAATATGTTATTTCAATGAATTTCAGGTTTG
GAAATATCATGAAATAAAAAAAAGTCATATTTTCATATTTACTAAAGTCT
GTCTCAAAATAATTTGCAGCTGATACAAAAATGGGTTGTAACTTTTGATA
GAATTCGAATTAAGTTATGACTTTGTGCTCATTGAAAAGATATTTGTGAT
TGGAATATTATCAAGCAAATGGTAAATAATTTTTTTTGCTTGATAGTATT
CCACTCACAAAAATCTTTTCAACAAGCACAAAATCGCAACTTCATTCAAA
TTCTATCAAAAGCTACAGCTAATTTTTGTCTCAGCTGCAAATTATTTTGA
GACAGACCTTAATGTATAATGCATGGATATCACATTTTCAAATTATTTCC
AAGATTGGAAATCTCTTAATTCGCCCAGTTTTAGTTTTATGGATTGAATA
AAACTAAATCGTGTATCTCGTAATACTTATTTATAGGAATTAGAAAGATC
TCCTGTGATCACTCTGAATACATTTGACATTGTTTTTATCAGGTGGTGGA
TACATCATCGACAACTTTTCGCAATTGTGTTGTCAAGGAAATCCAGTGAA
CAAACAACCATTTTCCATGTGCTGCGGGTAAGTTAATCTTTTTCAGAAGA
CAAGATTTATTTGAACTGAGAGTCCGTTATGTATTCCAAAACACCTTTTT
GACCATAGCCGCTAATTGCCGCGCGGACATTTTTTGTCCGTTTCATCCCA
CTAAAACCGTCCCAGTCGTTTTTTTTTTGCACCTTTATAGATAATAGAAA
AATGTGTCAAAAAAAGGATTGGATCGAGTTTAGTGGGATAATTAGATAAT
TAAATGACACGCACCTGACCGCGCGACTACGGTCGAAAAGGTGTATACGC
CCTTGTAATGATCAAAGCTCAGTGTCGATTTTGATTGGCGTTATGAAAAT
AATGCTGTGTACTTTTTGAATCTTCCTTTCTTGGCTGGACTAAAAGCCTT
TAACGGATCAATAAAACAGGGTTATTGTATTTTTGAAGCTATTCTTTTTT
CAAACTGAATTTACTTTCAGCTCTGGGCTTTACAACTTGATCACGGAAGA
TTGTGTTTCTGGTTCACCCGTTGCCAAGAAGCTCCCAGAATGTGGTTCAT
CTAAAACAACGTATGATGCTTTCAAACAGTTTTGTTACCATGGCGATGTC
TATGCTCACGAAAAATATGTGGAATGCGACGGTGCTTTGTATTATGTCTA
AATTCTGTTAAATTTTTATAATATATTTAATAATTGGAGTTTTTTTGGAA
AAATTTAAAAATACAAAAGTGTTCAAATCTCAGAATCGAATAGGCCAATT
GCAGGCACGATATTGTTCTTAAATGTTCTTAGTTTCAACATTCTGAGCCT
TATTGTTCCCTTTTAAAAATGTTTCAATAAAGCCCACCGGATTCATGTAG
TCGTGTTTTTATTTGAAAATATAGTATTAAAGTGTTGTTAAAGTACTGTT
TTTCCTTTTTCAATCTCAATTACATTTTAAGGAGCTTTTTAAGATTTTAA
TCAATCAATTTTTTCATTCTTTCAAAATATGTCAGCTTTTCAGGCGCTCT
CAGTCTACTTCACTTCACGGGCGCTTAATGAAAATTATCAAAAAACACCC
CTGTCTCGCAGATCCGGAAGAACCTCTCAATGGGAGTGAAAATTTCTATC
AAAATCCCAATAGGCCCCAATAGGGATAGTTTAAAAAGTCCAGTGAGAAT
AGTTTTGGGGTGTAGTGTTTTTTTCATTGTATTTCAAATGGGGATAAAAA
GTCAACCTTTCAGTGCGGTAGAAATTGCAGGGGACGTCGGGACAAAATTG
TAGTGAAAAAATTTCAAGTGGTTAGTGGTCTCCGGGTTTGTGACATAGGG
TTGACAAAAGCTAATATCAATCAGGAGTTGATTCTTGTATAATTGATATA
CAGCATTCTTTTATAAATTAAATGTCAGTAAAATAACAAATAAAAACCTT
CAATTTAATCTGAACATCTGAACTATACATCTACATCGAGTACCAAATCA
ACGGATGCACGGCATTTTAGGTAGAGCGAATAAGGAGAATGAATGTACCA
TGTATAAATCGGGGATCAATGGGGATTTGATTCTCTGTCAGAATTTTTCT
GCCATGTGTCACGAGTGTTGAACCGCCCATCATCCGCCCATCTGTGGGTG
CG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073832TCONS_00073832Clytia hemisphaericatranscript
TCONS_00073831TCONS_00073831Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073832-proteinTCONS_00073832-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:227577..231228 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
365.94	380.98	145.22	110.97	5.05	3.42	1.29	1.76	0.52	2	0.51	0.46	0.19	0.14	0.01	0.04	0.04	0.06	0.09	0.27	0.79	0.4	157.97	131.32	0.2	0.16	8.07	9.7	82.39	95.07