XLOC_045714 (gene) - C. hemisphaerica

Overview
NameXLOC_045714
Unique NameXLOC_045714
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_96:11387..15348+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045714 ID=XLOC_045714|Name=XLOC_045714|organism=Clytia hemisphaerica|type=gene|length=3962bp|location=Sequence derived from alignment at scaffold_96:11387..15348+ (Clytia hemisphaerica)
CGTTTATATACATTTACTTTGACAAATTATCTTCATATTCTCATATTATC TTGTTAAATagccaaaacataaaaaaattatcaacaaaaTGGAGAGAAGG ACTGAAGAGGTGATTAAAGACGTCAAAATGAGAGCCAGACCTGgtgaata tttttaacttttttagaaaTGATAATCGATATAAGAATTCATGCTATCCG TGTATCAATCAAggcatttcaaattttcattccttTAAAAATAGTTACCA GAGGCAAAGGTTGGTATTTCTCGGCGAGAGGGGCTATTAATAACGACGAA CGAAATTAGTCCTCAAACTTCAGAATTGCTTTAAATACCCTCTCATTTTT CTTCAGAACTGAAAAGCCTCGAAGGCTGGCAGCGACTTGGTTACGCTGAT TCATTTGACGCTTCACTAAGCAGGCCGTGTGATAACGTGCCAAGGGTCGA TTGCAGTACTTTATCACACCAAGATTTTATTGAACAATATGAGAAAAAAT GTAAACCTGTTGTATTAACTGGATGTCAGAAACACTGGTTGGCCAATAGG AAGTGGACTTTAAAGGTGAATAATACACTATGGGTAGGAATTCGTAAAAG AAAATCTCCAAAcgaaaaatgttccaaaaattgtgaaaatctaCTTTCGT ACTCTCTTTCGATCGTTATTATAAAGGCCGTTGAGATGTTGATTTACATT ACAAAATGAGATGCACAGAGAAAAATAGCACAACATTAGCTCTAAATTAC TTGAAGGTGACTAAGTGATATTTTTGTTAGACCCTAGCGTTTGATCATTA ACCCCAGTATGTGAATCAGCCTGCCTGCTTTATTTAGCTTACATTTTTTC TTATCTGATGACTTGCTTCTCCTTACGAAGGATGCCCGGTTCTGTATTGA ATGGTCTATGAGTCGTCTCGTTAGAGCCGTCCTACGCTTTATTTTCTGGA TCAAGTGCGTTAATCCGGCGCGAACCACTAATGGCGGATTAACGCACTTG ATCAAAAAAATATAGCGTAAGACGGTTCTCTGATCCTTAGTTCCCTAAGG CAAGCGAACTCTCACCTCATCCACGGTGTATTGTGGAATGGAAGTCTAGT ATGCGAATCGACTTGCCTCCGTTAAGCTTTCACTCTTTACTATCTACTAC TACCATAGAAACTAGCGAAGAAATATCGCAATCAAAAGTTCAAAGTGGGC GAGGACGACGATGGTTATTCGgtgaaaatgaaattcaaatatTATTACGA ATATTTGAAACGACAGAACGATGACAGTCCTCTCTACATATTTGATGGTT CTTATGGCGAGGTAAGTTTTCTAACTAAAAAGTTTAGGACTCAGAACTGG ATTAATCGTTTTGGTTATTATGGTAGTTTTGGGTTCAATCTCTGGCTGGC TATCTGCTAAATGCTCAGCTTTCTAagggaaggatcaagggtaaatgTAG AAAATCCAGGCAgaaaatccagggagaaagagtggcgccctcacCCTACA TTCGAGTAAAAGGTTTCGAAAGAGCGAAGCCTTCGAGCCACCTTGTATTG TGGTCGCAAGACGAGCTCAAGGATCTTcgtcaattttagaaaataaattc acAAGATTTCAAAGAGTTCTTCTCCATTAGTTTTCTTTATATAAAGTCAC TTACTTTTTTTCCTTCCAGCCTGTTTTTTTTCGGTACTTGAGAGTAAGAC TAAGATATTAATTTATATCTTCGTAAAGGCACAGATACCAGTAATTTTCG CAGATTATCTTGTGTAGCCAACCATTAGGTTACATGTGCGCCTTGAATGG AGCAATCAGACATGCTCGGAGTTTATGATGTCTTTTCcgcctcttttttt ttcatcaagcATTCACGTAAAAGGAAGCTACTGCAAGATTACGCACCTCC GACTTTCTTCCAAGACGATTTGTTTCGGTATGCAAGCGAGAAAAGAAGAC CTCCTTACAGGTTAGTtgacaaaaatgaagtttttttaacattCATACAC ATAATTAAGGTTTAGGCCTAATATTGACATCGTAGGGAGGGGGCATTATG AATTTTGCTGTGATTGAGAATTTCTCTAGTACAAGGTttgatttctgaaa attttttagaatatttcaGGCCCCAGATTTTTTAGGTAAATTTTGGCTAT AGATCTCCCTGAAAAAGTGCCTTTAtagtttctattttttttaattaaca cACTTTTaggagaatttttttaacctcGCTAAGCCCCACACCCTCTAACC ATTCTATTTCTGTAGACTAAAATGTCGCCAATTTCTATAATACAGGTGGG TTGTGATCGGACCATCTCGTTCAGGTACTGGAATACACATCGACCCTCTG GGCACAAGTGCTTGGAACGCGTTGTTAAGCGGACATAAGTGGTGGGTCAT GCTACCAACGGAAACACCCAAACACATGATCACCGTACCTAAAGGTCTGC ttatagaatttttttgagTAGAATGGATATGAGTCATGATAGCGTGTAGC TAGCTAgaatatttatctttttaatttcaagtTTAAGAAGCTAACTCCAA AAAACTACTTTATGCAAATAGATTCGCCATAATTCCACGATTCTTTATTA TAGGGCTAAGTTTAATACCCTTcgacatcaaaaataaattcaccCAAGAC CCCTTTCTCTGAACAAATTGTCGGCCGACATGTTTTCCTATGGTACGATT TGACGACACTTCCTAATTTCTAAATGACCCTTTGTGAAGAGCTATAATTG CCAACCATTAAATAACACAATGTTATTATGTAACATAAACAACTGAACTT GCTTTTTCACAGGCGAAGGTCAACACCAGTCTGGAGAAGGCGTTCAGTGG TTCCAAAAAGTCTACCCTAAAATCAAAAGTCCAACATGGCCGAAAGAATA CGCTCCGGTATGCAAATTtatatttctttaaatttcCAGAACAAGGCtta attttagcaaaaatctAGTAAGAATAAAACAAAAGCCGAGGCTCGAAATG AATAAGAAATTTCTTGTAACAGCAGAAACATTTCGAGGAAACAATGAGTA CCTATCTCGTTTGAAATACAGTATTGAATGGAGGATGGATGTTTCAGGCT TGAAGTAAGTTACATGAAATATTGAATATTCTTGACAAATCACGGTGGCA TTACCTAATATTTTCTTCCTTGAAATGGGCGATTAAGTCCAGCAGTTTCA TTTTGAAAACCCCTTTCTGAACCAAATCGGACTAAACATCGTTGGGCTTT TTTGTAGTTGGAGATCCTACAGAAACCTGGGGAGACTGTCTTCGTACCCG GTGGATGGTGGCATGTCGTGTTGAACCTGGGTCAAACAGTGGCTGTCACA CAAAACTTCGCTTCACCTACTAACTTTCACATCGTCTGGCACAAGACCGT TCGAAGTCGACCCAAATTATCTAAGTACTGGCTAAGTCAACTCAGAGTAA GTAGTACTGTATTTTTTGCCTTGTTTATGTATTAAAATTGAGTACAAATC TATTCCAATTTTCAAGGAAGAAGTTTAAACTTTTTCGGAGAGTTCTTGCG AAGTTGTGAATTGTAATAATGGGCTTTTTTAATCTCGCATTAAATCCAAA GTATAAGGCTATATACTGATGCGTTTTTCAGACTTGATGGCAGCCACTCT AtaaacttttaaagtttttaaacttttaaagtaTTGGATAAACTAATCTC GAAAATACTTTATGTGCTTGcaaattaaaaacaatcaaCTTCTTTTCATA GATGTATCGACCGGAGATAGCCAAGATAGCGGACCAAGTCAACATCACCG GTAGCAGTGGCATTGCATCCGATTCAAGTTCAAGCAGTTCCAGCAGTTCC AGTTCTTCCGAATCGGATACCGATTCTGAAGATTCTTCACCCGATTCGGT TTACGAAGATGATGATCGACGAGAAATTCGGGAAAACGGACAATCTTCTC CTAAAAGGTAat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073614TCONS_00073614Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073614-proteinTCONS_00073614-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_96supercontigscaffold_96:11387..15348 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
JMJD6bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.37 30.94 34.83 37.25 34.93 22.14 30.82 32.51 24.43 24.12 23.21 21.17 36.54 38.17 22.69 18.46 24.26 25.55 12.59 9.33 19.1 19.3 34.52 33.06 53.88 54.1 11 9.81 18.22 19.29