TCONS_00073614-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073614-protein
Unique Name	TCONS_00073614-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	386

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073614-protein ID=TCONS_00073614-protein|Name=TCONS_00073614-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
MERRTEEVIKDVKMRARPELKSLEGWQRLGYADSFDASLSRPCDNVPRVD
CSTLSHQDFIEQYEKKCKPVVLTGCQKHWLANRKWTLKKLAKKYRNQKFK
VGEDDDGYSVKMKFKYYYEYLKRQNDDSPLYIFDGSYGEHSRKRKLLQDY
APPTFFQDDLFRYASEKRRPPYRWVVIGPSRSGTGIHIDPLGTSAWNALL
SGHKWWVMLPTETPKHMITVPKGEGQHQSGEGVQWFQKVYPKIKSPTWPK
EYAPLEILQKPGETVFVPGGWWHVVLNLGQTVAVTQNFASPTNFHIVWHK
TVRSRPKLSKYWLSQLRMYRPEIAKIADQVNITGSSGIASDSSSSSSSSS
SSSESDTDSEDSSPDSVYEDDDRREIRENGQSSPKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045714	XLOC_045714	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073614	TCONS_00073614	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003347	JmjC_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003347	JmjC domain	SMART	SM00558	cupin_9	coord: 141..305 e-value: 7.7E-35 score: 131.7
IPR003347	JmjC domain	PFAM	PF02373	JmjC	coord: 174..288 e-value: 3.6E-24 score: 85.3
IPR003347	JmjC domain	PROSITE	PS51184	JMJC	coord: 141..305 score: 34.402
None	No IPR available	GENE3D	2.60.120.650		coord: 49..292 e-value: 3.7E-43 score: 147.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..386
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 39..323

Blast

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BLAST of TCONS_00073614-protein vs. Swiss-Prot (Human)
Match: JMJD6 (Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens GN=JMJD6 PE=1 SV=1)

HSP 1 Score: 444.121 bits (1141), Expect = 1.148e-155
Identity = 206/339 (60.77%), Postives = 252/339 (74.34%), Query Frame = 0

Query:    1 MERRTEEVIKDVKMRARPELKSLEGWQRLGYADSFDASLSRPCDNVPRVDCSTLSHQDFIEQYEKKCKPVVLTGCQKHWLANRKWTLKKLAKKYRNQKFKVGEDDDGYSVKMKFKYYYEYLKRQNDDSPLYIFDGSYGEHSRKRKLLQDYAPPTFFQDDLFRYASEKRRPPYRWVVIGPSRSGTGIHIDPLGTSAWNALLSGHKWWVMLPTETPKHMITVPKGEGQHQSGEGVQWFQKVYPKIKSPTWPKEYAPLEILQKPGETVFVPGGWWHVVLNLGQTVAVTQNFASPTNFHIVWHKTVRSRPKLSKYWLSQLRMYRPEIAKIADQVNITGSSGIA 339
            M  ++++ I++ K  ARPELK    W R  Y +SF  S +   DNV R D   LS ++F+E+YE+  KPVVL   Q+ W A  KWTL++L +KYRNQKFK GED+DGYSVKMK KYY EY++   DDSPLYIFD SYGEH ++RKLL+DY  P FF DDLF+YA EKRRPPYRW V+GP RSGTGIHIDPLGTSAWNAL+ GHK W + PT TP+ +I V + EG +Q  E + WF  +YP+ + PTWP E+ PLEILQKPGETVFVPGGWWHVVLNL  T+A+TQNFAS TNF +VWHKTVR RPKLS+ W   L+   PE+A +AD V++  S+GIA
Sbjct:    1 MNHKSKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVRGRPKLSRKWYRILKQEHPELAVLADSVDLQESTGIA 339

The following BLAST results are available for this feature:

BLAST of TCONS_00073614-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073614-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
JMJD6	1.148e-155	60.77	Bifunctional arginine demethylase and lysyl-hydrox...	[more]

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TCONS_00073614-protein (polypeptide) - C. hemisphaerica

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