XLOC_045474 (gene) - C. hemisphaerica

Overview
NameXLOC_045474
Unique NameXLOC_045474
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_9:134961..139181+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045474 ID=XLOC_045474|Name=XLOC_045474|organism=Clytia hemisphaerica|type=gene|length=4221bp|location=Sequence derived from alignment at scaffold_9:134961..139181+ (Clytia hemisphaerica)
TGGTcatttactttcactttcgttttcgttttagTATGAACGGCAACTTT GATCGCACAGCAGgtactttttgatttctgaataAGAAACATAGCACAGA GCGGCTTGTAAACGAACTTATGAAAACTCTCTACAGCTTCTTCAAAGGTG TTTCCTCACACTCTGTATAATATCTTTTGCAACAAGCTTCAAAACCGAAA GTGGATTTCTACACACCTGACCGCAAATAAATGATAATTTTTGTAAAGAT ACACCAAGATTTTTCATATCGCAGCATTATGTAGAGTTATGAACGTTGAA TATTGATGGAAATAAATTTTACGAGGAGAGCCATCAACTGCTTCATGCCA GGTGGATGCCGTAAATCCACCGTAAAATGTCTCGAAACCGTGACTATTTG AGTCGTAAACACCGAAGCAATAAACAACCTTCAAACTCCACTAACCATCG ACATGACATTTTCGAAGAACGACAAAACCACCACGACCTTCAACAACTTG AAAACGAGGTTCTTCCACTTGGAGCCGAGGCAGATGACAACGAAAGGAGA CAGGTATTAGTGGATATGATATATGAGAGACATTTGAGCGGAGAAAAGAC TGGGGAGAATGACTCAACCTCTTCTGACGAAGAACAGATCAATGAACAag gtttgttatttttcttccctaaaaaccaattttcttcCTCTCGTTTTCTC ATTTCAGATTTTGAACTTCTTTAGCATAAGGGAGGTTGTTGTCCGGTCTA TACGGAAAGCCAATACTTGTGTTCTATAGTATAATATTAAATCTGCCTAT CATTTCTGGTCATGTTCCAAACGATGCTTCAAATTTTGTGAGAAATTTTA TCTTCAATACTAAAACTTCTTTATTGACAGTAAATATAGAATTATTACAT GAAAGTTATATTTCTTAGAGCGTTGCCCGTTGGAgtaaaaaacagcaaaa aaacatgttttttgaCTCCAACGAGCTATCTTCTAGAGGATGTAATTTTC GATCTAAGGACTTTAAGggaaaaataattatatataaTAGCTGAAATCAG GCTAAAAGTatctttgtaccaaaaataaAGATgctcaaaaagtttgtttt tttttctttgtgtttcatcttattttaaatatttttgagttacttttcca aaaaaattatagtgctctgaatatttttcaactggTATATCCAAAAATGT TAGAATTAAGTATTTGTTGAAAATTGGCAAACAAAAAATCCCGAAATTTG ACCGGGTTTTGAGTTTTAGAAATTGTGGAAGGGAGTTTCGGATCAATCAT TTTTGGCCGAAAGTTTATCACTTTTCCCAGAGAACGTCAGTGTATGTGTT GTtcaagataaaataaaataaagagcCCTCTCTTTCAGATTATTGTTGGT TCTGGGACGAGTCAAAAAAgtcagatgacgtcatcgtacAAAACTGTGGA ACAGAAGCTTATTTTCATCCGGACTACAGCTGCGGGACGGCTGCGATCCG GGGCAACCGACAATTTCGTGAAGGCGAGGAACATTACTGGGAAGTTCAAA TGTCGAGTGCCGTGTATGGTACAGATATGGTATGAGTGGTTTTTGTTGGA cctctttaaatgttcttagttATTAAGGATGAAAACAACAAATTCTCAGT TGTTAGAAAAAGAGGTTTGTTTCTCAGAGCAGCGTGTTGCTTAGCTAAGA GTTTTGAAACTATTCTTCCTTTGAATTCGAGCTTTTTTATGAATGATaag cttttttgaatttctttattaCAAAATGATCCATAATTTCTTGGTTTGAA TGCGGTTTGCAATTTCAGACATTACATGCAGAGTTTCGTTTCAGTTTCTT CCAGACAATGTCCATCCCAACAAAGAGTAAGCAAAAAATCTACGCATGCG TATTGAACTGAGCTTTTTTGAATGCATGTTCGCATGAATTTTCACATTCT TGttttaaaggggaattaacgtATCCATTTTACCCTTTCAAAATGCATTC acacaaaaaaaataatcattgaaaaaacttttttattcgcTGAATTAAat aagatgaaaataaaaaaatttgtataatttAGTCTGCCGATAAAATTTTC ACGTAAATGTATTTTCCTGAACAAGGCAtagattcaaaagaaagaaatgc gaaaattgaattatttgcGAAATTAATCCGATTAGATACATTCCcaataa ataaatcaatttcaaaattctggaaagcaaaaaaaattgtagcTTCCTTC AACGTGAAATTGACAAAACTTGATCTATTGTTTGCCCTGTATAAATTAGA TAATGTTGCTCACCAAATGGGAGGATTTAAACCGCACAGGCATGAATGAA TAAGCATTAACTAACGATTTTTAGTCATTCCCTTTCTTGATCACTCTTGC TTTTCAGATGATCGGTATCGGTGCCAGCAACGTCAACTTGGATCGCTACA AATCGCAATTCTGTTCGCTCATCGGAAAAGATATCGACAGTTGGGGAATA AGTTACTTCGGAACATTACATCATAAcggaaaaactaaaaacttctGCAA AAAATTCGAAAGAGGGGCTACTATAGGCTGTCACCTCGATCTTTGGAAAG GCACTTTATCCTTCTATAGGAACGGAGAACCTTTAGGAATAGCTTTCGAT GGATTACTTGGTAAAGAGCTTTATCCAATGATCTCCTCAACCGCAGCAAG AACGAAAATGAGACTTTTGTGTAGCCGAAAGACGAATTTTTCTTTACAAT ATTTATGTTGCAAAGAGATCAGTAAGAATATCCCTTCATCGAGGAACAAC AACGTTTTAGAAACTCTACCTCTGCCCAATGGATTGAAAAAATACATCGG CTGGAGAATGGATTGGGTATTCACATTAAACAACCCTCGAaaactttctt cttcttctgcgCCAACAAGTTCAACGAACtcaaacaaaatgaaagaaatt gccGGTCCACAAAGAAAGCGCATCCGAAGGTATTGACTTTATTTACATTA CCATGACAACGACGACATTACCATGACAACCGACCGACATCACCTTGACA ACCGACCGACAAAAACAATGATTGACGAACGACAAAATTTGTCCGAAAAA TTAGAgagtatattttttttaagaaacggAGTAGATAACTGATGATTTTT TATGTaaattgttttatgtttttgtatattttttgacGAAAGAATTTCTA TTGCACTGGTTGCAACTACACAGGAGACCCAACTCGACATCTTACATGGA CGGTACTTTTATGACGAATTGACAATGGCACCAATTCGAAGATTTCAATG GACTTTTTCATTAATTACATCACGagcgttttcaaaatattgctatggtt attgattcccagaggagtCCACTTTATTCaaaaagtactttaggcgtaca aactttcgcgagatcgtaaaatcgcgaaattcacgacatttactttcgcg aatttcaggaaaaaatatttttcgcgagcacaaactttcgcgaatcgttg gatgaaaatgaaaatttataaacgaaaatttgataaaaagtgATGCTCCT TGAATCCGATAAAAACGGTTATACTTTGACTTTAAAAAGGCGTCAAAGGc aataaatatgctgaaaattgTATATTCATTacgatttcaaagttttttag attttcaattttttaaagaaaatttcgcgagcataaactttcgcgaatca ccCTGTTAAGAAATttcacgagcataaactttcgcgaaaaaggccaaaat tcgcgaaaatcgcgaaagtttctgcttgcgaaagtttgtacgtctaAAGT AACATCATCTTTTGAAAGTCTGAAAATTTGCGAATTTTAGTTAATGTGTG GGGCTCCGTTTATTCtaacctgttcttattttctaaAATCACTGAAATGA ATCCAACCCTCGAATGTCATTTTCTGAATGTTGATTAACCGAACAAGTCC TGAATGTGTGAAAAGTTTCTGTTGAActattccttttctttttccagCAA ACACAAAGACAAAGAGACTCCACTCACCGATGAAGCAGACACCATctaac aaattttcatttctcactatttttactttttttacgaatctcaattttgt aaatttgatttttggatactaacaacattttttttctcatgattaacaaa attgattattttggtCTTCTGAGTACTTtccaaaccaaacaaaactaaac atagCAACATGTCATTTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073304TCONS_00073304Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073304-proteinTCONS_00073304-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:134961..139181 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.03 0.13 0.09 0.3 0.24 29.27 36.09 21.36 18.17 16.2 12.31 60.96 61.97 38.86 58.14 40.12 40.95 9.83 10.99 39.43 37.9 24.25 28.85 38.57 47.14 5.94 3.21 0.12 0.19