TCONS_00073304-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073304-protein
Unique NameTCONS_00073304-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073304-protein ID=TCONS_00073304-protein|Name=TCONS_00073304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MSRNRDYLSRKHRSNKQPSNSTNHRHDIFEERQNHHDLQQLENEVLPLGA
EADDNERRQVLVDMIYERHLSGEKTGENDSTSSDEEQINEQDYCWFWDES
KKSDDVIVQNCGTEAYFHPDYSCGTAAIRGNRQFREGEEHYWEVQMSSAV
YGTDMMIGIGASNVNLDRYKSQFCSLIGKDIDSWGISYFGTLHHNGKTKN
FCKKFERGATIGCHLDLWKGTLSFYRNGEPLGIAFDGLLETLPLPNGLKK
YIGWRMDWVFTLNNPRKLSSSSAPTSSTNSNKMKEIAGPQRKRIRSKHKD
KETPLTDEADTI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045474XLOC_045474Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073304TCONS_00073304Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003877SPRY_dom
IPR001870B30.2/SPRY
IPR013320ConA-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003877SPRY domainSMARTSM00449SPRY_3coord: 137..256
e-value: 7.5E-9
score: 45.4
IPR003877SPRY domainPFAMPF00622SPRYcoord: 140..238
e-value: 1.5E-16
score: 60.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableCDDcd12876SPRY_SOCS3coord: 94..251
e-value: 1.32815E-79
score: 241.738
IPR001870B30.2/SPRY domainPROSITEPS50188B302_SPRYcoord: 75..269
score: 15.894
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 91..238

Blast
[Close]
BLAST of TCONS_00073304-protein vs. Swiss-Prot (Human)
Match: SPSB3 (SPRY domain-containing SOCS box protein 3 OS=Homo sapiens GN=SPSB3 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 9.900e-55
Identity = 94/250 (37.60%), Postives = 138/250 (55.20%), Query Frame = 0 
Query:   95 WFWDESKKSDDVIVQNCGTEAYFHPDYSCGTAAIRGNRQFREGEEHYWEVQMSSAVYGTDMMIGIGASNVNLDRYKSQFCSLIGKDIDSWGISYFGTLHHNGKTKNFCKKFERGATIGCHLDLWKGTLSFYRNGEPLGIAFDGL------------------------------------------------LETLPLPNGLKKYIGWRMDWVFTLNNPRKLSSSSAPTSSTNSNKMKEIAGP-QRKRIR 295
            W WD+  KS   ++     +  FH +YSCGTAAIRG ++  EG+ H+WE++M+S VYGTDMM+GIG S+V+LD+Y+  FCSL+G+D DSWG+SY G LHH G   +F  +F +G+ IG HLD W GTL+F++N + +G+A   L                                                LE LPLP GLK+ +  ++ WV +++  R+ +  S P ++T+++       P QRKR R
Sbjct:  105 WVWDDLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQ-HFWEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCIGVAATKLQNKRFYPMVCSTAARSSMKVTRSCASATSLQYLCCHRLRQLRPDSGDTLEGLPLPPGLKQVLHNKLGWVLSMSCSRRKAPVSDPQAATSAHPSSREPRPCQRKRCR 353
The following BLAST results are available for this feature:
BLAST of TCONS_00073304-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPSB39.900e-5537.60SPRY domain-containing SOCS box protein 3 OS=Homo ... [more]
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