Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00073304-protein ID=TCONS_00073304-protein|Name=TCONS_00073304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005515 protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005515 protein binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 Expect = 7.5E-9 / Score = 45.4 Expect = 1.5E-16 / Score = 60.5 Score = Score = Expect = 1.32815E-79 / Score = 241.738 Score = 15.894 Score = Sequence SM00449 PF00622 mobidb-lite mobidb-lite cd12876 PS50188 SSF49899
IPR Term IPR Description Source Source Term Source Description Alignment
IPR003877 SPRY domain SMART SM00449 SPRY_3 coord: 137..256 IPR003877 SPRY domain PFAM PF00622 SPRY coord: 140..238 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 267..312 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..36 None No IPR available CDD cd12876 SPRY_SOCS3 coord: 94..251 IPR001870 B30.2/SPRY domain PROSITE PS50188 B302_SPRY coord: 75..269 IPR013320 Concanavalin A-like lectin/glucanase domain SUPERFAMILY 49899 Concanavalin A-like lectins/glucanases coord: 91..238
Blast
BLAST of TCONS_00073304-protein vs. Swiss-Prot (Human)
Match:
SPSB3 (SPRY domain-containing SOCS box protein 3 OS=Homo sapiens GN=SPSB3 PE=1 SV=2)
HSP 1 Score: 181.8 bits (460), Expect = 9.900e-55
Identity = 94/250 (37.60%), Postives = 138/250 (55.20%), Query Frame = 0
Query: 95 WFWDESKKSDDVIVQNCGTEAYFHPDYSCGTAAIRGNRQFREGEEHYWEVQMSSAVYGTDMMIGIGASNVNLDRYKSQFCSLIGKDIDSWGISYFGTLHHNGKTKNFCKKFERGATIGCHLDLWKGTLSFYRNGEPLGIAFDGL------------------------------------------------LETLPLPNGLKKYIGWRMDWVFTLNNPRKLSSSSAPTSSTNSNKMKEIAGP-QRKRIR 295
W WD+ KS ++ + FH +YSCGTAAIRG ++ EG+ H+WE++M+S VYGTDMM+GIG S+V+LD+Y+ FCSL+G+D DSWG+SY G LHH G +F +F +G+ IG HLD W GTL+F++N + +G+A L LE LPLP GLK+ + ++ WV +++ R+ + S P ++T+++ P QRKR R
Sbjct: 105 WVWDDLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQ-HFWEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCIGVAATKLQNKRFYPMVCSTAARSSMKVTRSCASATSLQYLCCHRLRQLRPDSGDTLEGLPLPPGLKQVLHNKLGWVLSMSCSRRKAPVSDPQAATSAHPSSREPRPCQRKRCR 353
The following BLAST results are available for this feature:
BLAST of TCONS_00073304-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M S R N R D Y L S R K H R S N K Q P S N S T N H R H D I F E E R Q N H H D L Q Q L E N E V L P L G A E A D D N E R R Q V L V D M I Y E R H L S G E K T G E N D S T S S D E E Q I N E Q D Y C W F W D E S K K S D D V I V Q N C G T E A Y F H P D Y S C G T A A I R G N R Q F R E G E E H Y W E V Q M S S A V Y G T D M M I G I G A S N V N L D R Y K S Q F C S L I G K D I D S W G I S Y F G T L H H N G K T K N F C K K F E R G A T I G C H L D L W K G T L S F Y R N G E P L G I A F D G L L E T L P L P N G L K K Y I G W R M D W V F T L N N P R K L S S S S A P T S S T N S N K M K E I A G P Q R K R I R S K H K D K E T P L T D E A D T I 50 100 150 200 250 300 Expect = 9.90e-55 / Id = 37.60 Sequence SPSB3
Match Name E-value Identity Description
SPSB3 9.900e-55 37.60 SPRY domain-containing SOCS box protein 3 OS=Homo ... [more]
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