XLOC_045415 (gene) - C. hemisphaerica

Overview
NameXLOC_045415
Unique NameXLOC_045415
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_88:48813..54598-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045415 ID=XLOC_045415|Name=XLOC_045415|organism=Clytia hemisphaerica|type=gene|length=5786bp|location=Sequence derived from alignment at scaffold_88:48813..54598- (Clytia hemisphaerica)
TAATTGTAAAAATATACAATTTTTTTCATTTCTTGACATATACTCAAGTC ACAGGGGGTACCAATCACAGGGGGTACCTACTAACGTCTGTTGTTTGGGT TACCTAAAATTCAGGGGATACCTATTTTCTTAGGGGGTACCTAAACTGGT CCATGCCATGATAATTTTGTTGGTAGTAAATAGGCTAAAAAATAAGTTAA AAAATAGAAAATGCAGGACCCAAGTGCTGATACTGAGTGGAATGATGCTT TACGAAGACATGGTATTATACCAGAGAAAAAGAAGGAAGCAGAAATAACT GAAGATGAAATCATCAAAATGGTAGATGCAGCTGTGAAAGCTAAAACAGG AGAAAAAGATGTGAATGTAAGTAAATAGACATTTCCTTTCGATTCTTTTT TATATTTTTTTGATGATAGTTTTTACAAGAAATGGAAAAAAACTTTAGAA TTGCCTGACCCAACTATGAAAATGAATAGGTTCAACTATCAAAACTTTTT AAAGTTTATTGAATCTCCTAGTCCTAAACTATGAGATTTCTGGGCCTACC TGACGGAATTTTCTTGAATTTTCTCCTTATTTTTTCCTACTTTCTTGTTT ATTTTTCTGTTGATTAGCCAGGTATGTCCTTAAAAGTATCACTTATTACA TAATCGCTCAACTCTGACAGGCTCTAATAAACACGATTAGCAACAAACCA TTACTTTTCTTAGCTAGAAATTGACTTCCTTTATGTTTTAAATTTCCAAA CTTATTTACTTTTATATTCTTTTCATTGATTGCAGGAGATGACTTTGGAT GAATTAAACGAAAAAGAGGATGAAGACTGGGACGATGACGGTCTCATTGA ACAAATTAGGTGAGAGAATGACCTTTATTTACCCTAGACAACGCTTCTTG ACCCTGGTGAAACAAAATCTTTGATCAAAGTTTTCTAAAAGTGGTACCCT ATTAGTAGCACTACTCAATGTGGGTGAAAGAACTTTGAAACAAAAAATTT CAGTGAATTATAAATGGACACACATCGTCGAGTAGTGCTGACATTAGGGT AACACATTCAAAATACTTGATCAGAGATGGCTGATATAGCTTGGTCCAAA AGATATATAAAGGTCCAGAAAGGTCAGTTGGTGTGAACGAAATGTCTTAA AAATCAGTTCTATTTGTTGACTTACAATAATTCTTTTAGACAACGAATTA TCAAGAAAAGTTATTTTTCAATCCATCAACAAACAAAACTAAAAATTTTA AATTGAGTACATAACTCAGAGTTTCATGTTTCCACGAAAAAGATAACTTT TCTTGATAAGTATATGGCTCTGGTTACCCATCGAGCACTCTGACATCATC GCTTCGTCTAACCTTGATTAGACAACGAAACACTTATTTATACCTGTTTA AACTATTGTCTACAGTATAATGTCTTCTTCCCTTTTTGCTGAGGGTGACT GGAGATTGTCTAAATATAGAAATAAAACACACCAACACAACATTGGTTAT GATATCATTTTGGATTTGTTTTACAGGCAACAAAGATTAGCAGAGATGAA AGTATTGCAAGCTAAATCGAAATTTGGTGATGTTCGTGAAATTTCAGCTG TTGATTATGTTGATGAGGTCAATAAAGCTGGAGACGATGTTTGGGTTGTA TTGCATTTATATAAATCTGGGTATCCTTTTCAAATGTAGATGCTTTTTTA TGAGAACCATGCAATGATCTCTAACTACTTTATTGGGTCAGGCTACCCGT ATCTTAGGAAGAGTGTCCAGGTTTAAAGCTGACTAGTCCATCATCTCGTT TTCAATTCTGGCTGTTAAAGGTTTTGTTTTTAAAAATAAGAGTAATATCG TTTGCTTACTCATCAATTTTAATTCACAAGCTTTTTCACATTGACACGGA TGTGGAGGAAGATTGATCAGAAAGAGGAAAACAAAAACATTTTTTGCTTA TATCAGCATAATATAACAATAAGAAGACACTGTCCTGATATGAAATATGT GTCTGATAAGAAACGGAAACACTTAAAAAGTTAACAGCGTGGTTCGAAAG TTTTAAAATTCGAACGTTCGAAAGTCTAAGGTAAAATAGAAAACAACATA GTGGACTAGCCGACTTCAAACTGGACATACTTCCACAGGGCTCGAAATAA CGGTCGGACATCGGACATTGTCCGACCCAATTGCTGAAATGTCCGACCCA AATCGATTCTAGTCGGACATCATGTCCGACCCAATTACTTTCGGTGCCTT CAAAAAATTTGTCAGATGCGTTGTGAAATTTCCAAAAGAAATTATAATTT ACATAGAATTAGTAACTTCTTTATTTACACACAAAAACTCTCAAAGTTGC GATTATTAGTGTTAGATATTAATTTTGTGTGATGCTTTTTCTCAACAAAT GAAAGCATTCTTCAAGTAAAAATCATGGGCTTCTGACCATTAATTGGCAT TTGTTTAGCTTCTTTGTAATCAATATAATGTTAAGTATAATAGTAGAAGT ATGTATGAAATATACCCACATAAAAATCAATCGGACATGTCCGACCCAAA TCAATTTTTGATCGGACAATGTGTCCGACCACCTAAATATCGTTATTTCG AGCCCTGCTTCCAAATCTGTGAGCAGTTAGCAGTTCTAGTGTGTGAAAGA ATGTGATATCTGTGAAAAGAGCGATTGCAAGTTTTGGCTTGTCTTTGGCC AAACTTTTTTGACAAGTTTTTCAAAATAAAGTTAATACTCAGGCTTCGAA AGGAGGCTTCTTAAAATCAATATCTTGTTAGTTATCAATAGTGAGATAAC GCTCCTGGAAATTGCTTTCTTGTTCACTTTGTCAAATTTAGACAAAAAGC CCAGATTTCGGGACCCTGTAACTAGCCATCCGGTTGGAATTTTTCAAAAA AATTTTGACATGTTGCAACAATCATGGTTTTGACCAAAGTATTTGAGAAT TAAGCAGTTCTGAGAATATCACTTCCTGACCCTACCCATTCTTGTCTATT TTTCTCAGAAAATGGCTCTTAAGGGCAACAAATTCATTATAAGATTTTTC TCATATAAATTCTGCCCCTCTGTTTTCCAGACGCACTTTTCCAAAACACT GTTGATTAAATTTGCTACGCAGTGTATCAACTGTCATATATTTGTGTTAA TATTCTTCTTAACTTTTTATTGCATTAACATTCGAAAAGAATTCCATTAT GCGATGTAATTAATCACCATATCCAAGCACTAGCAAGAAAATTTCCGACC ACCAAATTCTTGAAAAGTGTATCAACAACATGTATTCCGAACTATCCAGA CAAGAATTTGCCAACCATCTTCATTTATTACGAAGGAGACATGAAAGGAC AATTAGCTGGTCCATTGACTTTTGGTGGAATGAGCTTGACTCAAAACGGT GAGCATAGTTTTGTTCTAAGGATTTTTAATAAGAATAACTTTTCGTAATG TTCTTTAAAGAGCTCGTATGAACCTATCCTCATTACTTGAAGGTTAAAAT CGAATTTTCCTATGACTTGAAATCTGATTCTCAGATTGATCTTAATTTGG TCCTTCTTAAGATTTGGCTTGATTTCAGTCAGCACCATGTACTTATGAAA TTGTTCTTATAAAAAAACGACGTTTCGATAAAATAGTTAAAAATAGTCAT ACCAAAAGATTATTTCTTCTCTTAGTAACACTGATAACTTAAAGCTATGC TTTATTTAAGGGAATAATAGTAAATATAACCCTATTTTTACTACTTTGAC CCTAAGATTTTTCCAAAACTTTAAGCTATTTCAAGCTGAACTTTTTTTTC TTAAATTTTCCTTATTTAATTTGCCGTTTTTCAGCCTCGGTGTCCTAATA AAAAGAATACTGTACAGTATTCAAGATATACACTACTAGAGAGCCTTCCA AGAATTTTCAAAAAATTCCACACAATACGTCACTTTTTTTATTCTTTAAG TGACGTATTGGGTGGAAAATTTTAAAAGTTCTCGAGAGACTCTCCAGTGG TACATATCACGAATGCGTTATTTTAGATCCTGAATGTCAATAGTAAGTTA TTTCTTTATCTCTAAATATTTCGCTCANCTTTATTTAAGGGCATACATTT AACCCTATTTTTTGATATTTCGACCGTAAGATTTTTCCAAAATTAAGCTA TTTCAAGCTCAACTTTTTTTTCTTAAATTTTCCTTATTTAATTTGCCGTT TTTAAGCCTCGTTGTCTTAATAAAAAAGAGTGTACTTAGTTTAGATCTTG AATGGCAATTGTAAGTTAGTTCTTTATCTCGTGATATTTCGCTCAAATTT TTTCAAATTTTCTTGAACACTTTGTGATTCTATTTATTTCACTGTAGATC TTGAATGGAAACTATCGAAACTCGGTGCCGTCAAATCAACCATGAAATCA GATCCACGTGGAACGAATGTTGATGACAGTTCGGGATTCTCTATGCTATC TCGTTCATCGCGCACGCGCAAAGAATCCGTGTCTAGTGATGATGATTATT AGAGATTCTTGATATACATGACCTAATCTTTTATACGGAAACACCCGAAA AACACCGGACGTTTGCCTCCAGTTTTGAATTTAAACAATGAACTGGTGGC AAACTTCCGGTGTTTTTCGGGTGTCCCGTATAAAAGATAAAGTCATGAAT ATCAAGAATTGAAAGAACATTTTTTTGTCAATACATACAACGATGTGATG AGTTTCCATTATATTTATACACTTGAGGACAACAAATGTCAATCTGGAAA TCGGAAATCGAGACGAGATTATTAAATCGATCGCTGTTTTATTGGCTGTG TTGTCAAACATTACTGGGTTCAAAGAAGTTTATAACACCTAATTGACACT GATTTTGATTTCATAAAATGAATCATTGCGGGGGATAGGGTTTGCAAATG ATGGAAAGTTTGTGCTGCCTCAGTTTTTACAAACCTTTTAACTTTAATGT GCACTTTGGAGAGTTCTTTCATAAATCATCTAGCTAGGCTGTTCTAGTAC AGCCAGGTGCAGTACATGATAAAACTCATTTTTCCCAAAAGTACCCCCCT CTCCCTTCAGTGCGTATATGAATATCACCCTTGTAGGTTTGAAATCTGCG TGTAAATGGTTGGAGGAATTGTTATAGATTCGGTTCGGATATTTTAAATC AGCGATCGTCAATTATTTTTTATTTTATGATTAATTTACATTTAGATAGT TTTTATTCCAAATTTATGCGAAATCATTTTTATTATATTTATACCATTCG ATTTTTCAACTCGTCATACAGTGCTGAGGCCAAATTTATGAAACTGTAGT CTAGTTTAAAGAAAACACAGTCAATGTCGATCTTTCGGCACCAATGATTG AACTATTTGAATTTGAGACGTTCACGCGCTACGGTTCCGTTTCTCTCCGA AACGAAACGAAGCCATTCTATTGGTTAAATTCAATATTTACGTCACTTCT AACCTATGGAATAGCTTCGTTTCGTTTCGGAGCGAAAACGAACGGTTACG TGCGAACATGGTCTGAGCTCATCGTTAAAAAGCGTTCTCCAAATTTTTCA AAAATAACGTGATAATCAACTGATTATGTTTAAGGTGGCAATTCTGAACA TTCTACTGAAAATTGTGAATCAGTTGGAACCTAGTCACGGTGATGAAGTT TCGTTATCACCTGTTAGTTATACCCAACATAATTTATAATTGGATTAACT TTGTATAGTTTTTTGCCTAAGTTTTTTCAAGCATTTCTATAATTCCTTTT TCTCCATGTCAAAATATATATTTTCACTATACCATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073213TCONS_00073213Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073213-proteinTCONS_00073213-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:48813..54598 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PDCL3phosducin-like protein 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.84 21.46 5.28 2.91 59.19 44.42 67.27 70.6 52.29 49.3 37.47 35.21 32.23 27.62 33.55 35.88 56.91 53.35 13.79 17.3 27.31 26.44 36.69 36.11 25.61 29.77 35.99 27.27 39.58 36.21