XLOC_045360 (gene) - C. hemisphaerica

Overview
NameXLOC_045360
Unique NameXLOC_045360
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:1114432..1117836-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045360 ID=XLOC_045360|Name=XLOC_045360|organism=Clytia hemisphaerica|type=gene|length=3405bp|location=Sequence derived from alignment at scaffold_86:1114432..1117836- (Clytia hemisphaerica)
TGGTACAAATGAAGTATAATTTAAGAATGATTCAATGCAAGGTCTCCAAA
ATGGCTTAGAATATTCTCATATTATAAAGTATATATTTTAAACCAATTAG
TCATACAAGCATACAAAGTATTTGAGAGAAACCTTAAAACTGATTATTCT
TATAAAGAAATCATGTGTTTTCCTGAAACGAGTGTCAGCACTCTCCGTCT
TACAATGAAATGTTGTTTTTTGGTACCGTAACAATCGTTTTCTTCCTTTC
TTTCAGTATATGACAAGCTAAGGGAAGCCTCTCTTTAGTACAACAAAAAA
ACATCAAAAGAAAAATAAATTGCTGAACAAAGGAGAACGCTGACCACAAA
ATCTGTCGGATTAGAAACGACAGTCAAGAAAAGAAAAGGGTGCAAGTTGC
TACATACACTGGACTGGTAATTAGTCACTGTTTTGTTTTTGTATTGAAAA
GTTGGTTCGTGACAGTATTGAATCGAGCAGAGGTAAAATACGCGAGTTAA
CAAGATCAAGAACACTTTAACGTTTATAACACATCATTGGACAGAAAATA
CGAAAAGTTGAAATAATAAAGTCGCAATAATCGAACTGCAGAACTAATAC
TGAATACAGACTACATTAATTTACGGAATAAATCTATCAAAGAAGAGATT
TATAATAAAGGCTTGAATAGTAGCGTTAAATTTAAATTTACTTCTACGTA
ACCATGAGTGTTCTAGTCGATTCAACCAATCAAGATGTATTGAATATACC
ACCACGCAAAAGTGTGTCAGCGCATCGCTTAAATTACCGGAAACAGAGCA
CTGATGGTGAAGTCAAAGTCAAAAAATCGAGTGTTATTCGCAGGAAAAAG
AATAATTTGGGAAACCAAAATTTCCGACATTCGGTCCACGATATATCGGG
AGCTTTAAATGAGCTTAATATCAAGGAAGAGGATGCAGGAGCCGATGGGG
TTGTCGGCGGATCCGCTAAACTGCACACTGAACGCGCCCGCTTGAGGCGT
ACGAAGAGTTTCCACGTATCCGAGGATCACGCGCATCAGAATATATCGCA
ACGTGACCGGAGTGAAATCTTAAAGCAGTACGTTGCCAATAAGTTTGAAC
TGGATATGGAAACTTTAGAAAACGATCTTAATAGCGATAAAGTACCGAAA
ATCGATTTTAAAGAAAGTTCGTTACCAATTCATGAAGCTATCATGAAGAA
ATATGAACAAGATTCTTTAAAAGAACTTTCCTTCTTATTATTGAAAAATG
ACTGTTTGAATATCGAACAGACCAATGCAGATGGTATGACACCGTTAGCT
TTCGCCGTCAGCTTGGAACTACACGATGTAGTACGTCTCTTGATCGCATT
TGGAGCCACGGTCAATTGTAAAGACAATTATGGTGAGGCTCCATTACGTT
ACGCAGTAGATAACGGCGATTTTGAAATGGCCAGTTTGTTGATTTCGAAT
GGCGCAAACGCGTCAGTTGTACAGAATGGATTTTAACAATTTTTTGACTG
TTCATTTGACGTAGAAAGCGTTTTGGTTAGAGATCGTTCTTTGGAGATTG
GTGAAGTGGAGGAATTGAGGATACCACTGAGCTGGAATTCTAAAACTCTC
CTTTTTTATAGCTATTAACACTTTGAAAGAGCTTTATTAAAATCAAAACT
CGGTTTGAGTTGATAGAGGGACAAGCTAAACTCTTTTTGGAACACTAAAA
ACTGCAAGGCTCAAATTTTAAACCTTCTTTAAAAACTATTTTCTTCATTT
TGAAGAATTTAAGTATAATATGGACACAATTCTGTGATACCGTTGAAAAA
AATCAAGGGTATTGTACAATATAAATGGTGGCATTTGGAAGACAAGGCTT
TATTTTGGAAAATAGATATTATCTTGAGGTGTTATCTTTTTATATAAAAT
TTTAATTGTAACAATTCAATTTTACAGTATTAACTAATATAATTTCTTTC
AAATCGAAACCCTTAATATTGGATGGGATTGAAAAAATGAGTATTTACAA
GCAATTATTGGTAAGTTTAGTGGATTTCCTTTACCAAACCAGGGATGGTA
GTCACTTGACAAATACAATCTCACACCCCTTCTCATAGACCTTCTGGGAA
CCCTTCCCACTGGAACAATTAGCTAAAACATCGTCCCCAGTGGAAAATTA
TACTCTCATTTTTGTCCCGCTGAAAATAATAAAATAAACAAATCCTCACT
GCAAAATATTATGCCATTTTTTTCCCCACTAAATTTTCTGGCTAAAAAAC
AATGGAATTCAAATCCCCAGCCATAAAAAACACGGGAATATCAATCCCCA
TCGAGTTTTGGTCCATCATTTTAACCCCCACTGGCTGATAAAATCCCACC
GGGTCTGTGAGAAAGGGGTGTAATCTCATCTCATTAATTTTTGTGCTATC
TATAAGACAAAATAAGGGAAACTGCTGGTACATTTTTAATATTTTTGCTT
TTGGATCAATTTATAATTTGGAAAGTTTGACAATTTGAAACCAGCTTATG
ACCAATATATATGAAGAAATTTATCTTTTTCAACTTGTAGATAATGTACA
TAGTAATATAAATTTTAATGAAAAATGCTTTTTCTATAGATTAAAAAACC
CTAAAATTATTGATATTATTCAAACCTCTGCAACCCTACCCTATCTCGAT
TAACTAACAAAAATCTTCTAGAAAGACTTAAGTGTTGAGGGTACAATCTT
TTTGTAAACTTTTTTTTCATCAAACTCATTAAAACGACCAGTCTTATCAC
GGAAAGAAAAAACAAAAACTAACTTTCATTGTCATGGCGAAATCGGGTAA
GAGTTGACAAAATCGTCAACAAAAGGTACTATAAAAGAATTAGAAAAACA
CACTCTCTCTCGAGATGGATATTTTCCATCCCCACTAAATTTTTTGGCTA
GAAAACAATGGAATTCAAATCCCCAGCCATAAAAAACACGGGAATATCAA
TCCCCATCGAGTTTTGGTCCATCATTTTAACCCCCACTGGTTGATAAAAT
CCCACCAGGTCTGTGAGGAGGGGGTGTAATCTCATCTCATTAATTTTTGT
GCTATCTATAAGACAAAATAAGGGAAACTGCTGGTACATTTTTAATATTT
TTGCTTTTGGATCAATTTATAATTTGGAAAGTTTGACAATTTGAAACCAG
CTTATGACCAATATATATGAAGAAATTTATCTTTTTCAACTTGTAGATAA
TGTACATAGTAATATAGATTTTGATGAAAAATGCTTTTTCTATAGATTCA
AAAACCCTAAAATTATTGATATTATTCAAACCTCTGCAACCCGGGGGGAG
GGGGGACTGGGCTTGCAGACTGACGGTATGTGCGGGCCAAAAATGGGCTT
TTAAAATTGCACCCTTAAGGTGCTGCAAAAGTCGGTGAAAATCATACCCT
TAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073143TCONS_00073143Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073143-proteinTCONS_00073143-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1114432..1117836 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19	0.12	0.14	0.37	0.28	0.3	1.06	1.02	0.51	0.34	0.44	0.28	6.35	5.95	10.97	9.87	11.63	9.06	5.14	2.35	7.49	6.87	18.38	23.22	12.36	11.46	87.9	49.42	18.56	19.37