TCONS_00073143-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073143-protein
Unique NameTCONS_00073143-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length260

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073143-protein ID=TCONS_00073143-protein|Name=TCONS_00073143-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
MSVLVDSTNQDVLNIPPRKSVSAHRLNYRKQSTDGEVKVKKSSVIRRKKN
NLGNQNFRHSVHDISGALNELNIKEEDAGADGVVGGSAKLHTERARLRRT
KSFHVSEDHAHQNISQRDRSEILKQYVANKFELDMETLENDLNSDKVPKI
DFKESSLPIHEAIMKKYEQDSLKELSFLLLKNDCLNIEQTNADGMTPLAF
AVSLELHDVVRLLIAFGATVNCKDNYGEAPLRYAVDNGDFEMASLLISNG
ANASVVQNGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045360XLOC_045360Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073143TCONS_00073143Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 193..222
e-value: 0.016
score: 24.4
coord: 226..255
e-value: 0.11
score: 21.6
coord: 154..187
e-value: 4300.0
score: 0.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 226..258
score: 11.461
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 193..225
score: 11.594
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 18..259
e-value: 7.8E-22
score: 77.3
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 160..254
e-value: 1.3E-10
score: 41.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 154..258
score: 22.835
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 174..256
NoneNo IPR availableCDDcd00204ANKcoord: 158..252
e-value: 1.0095E-16
score: 72.4162

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073143-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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