XLOC_045265 (gene) - C. hemisphaerica

Overview
NameXLOC_045265
Unique NameXLOC_045265
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:1415986..1422936+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045265 ID=XLOC_045265|Name=XLOC_045265|organism=Clytia hemisphaerica|type=gene|length=6951bp|location=Sequence derived from alignment at scaffold_86:1415986..1422936+ (Clytia hemisphaerica)
ATTTATTGCAAACACAAATTCTGGTGTATatttattaaaggttttgtttt tgaatgagagtgatatcgtttgctcaCTCATCAATTATAtgtaattcaca agctttttcacatcagattgacacggatgtggagccagattggtcagaaa gaggaaaggaaaaccattttttgcttatataagcataatataacaatagg tagacactgtaTTGATATgtaatatgtgtctgatatgaaacgagagcact tatgtaaaaatgaaacctttaatattttctttttttaagatttaattGTC GTTAAAGATGCCAGTTATTTCAAAACGTTTAGATGGGAAAGTTGCAATCG TTACCGCCTCTACGGCTGGGTATGCTTTTACTTTTTGGTTTCTGATTTAa gtccaaaaaaagaaaaatagatctTTATTTTGAGACAAAGTTCCCATTTG CTCGGGACGCAGGTCATCTAGGGGGCCCAGCGGTTTGCTTGAATGCgtta atgggctttttcacttgtgtgaatgcgtgaattggaaagctttacGTGAA cgaaaattgcgtgaattgcgacaaaagattgcgtgaatgcgtgaaattgg GAAACaaatttgcgtgattgcgtgaattgaaggtccgctgggaGGAGGGC TTCATCTAGACTGAGGTGAAAATACATGAGTAGAATGTGAAGCCGAGGAA GGCACTCAGGCAACATTTTGTATGGGACGTGCCGCTGATCAgtgtccctt ttttaggctcagAAGATATCTAACAatgtcccaaatttactaattttcaa ggtGTGTATCTGACTGGGTCGACCATTGGTTATTTTTGACAACTTTCCAG AAATGTGAAGTATGAGTCATTCAAATTGATATTTTAATGATCGactttct tcatcttcatctttttCCACAGAATTGGTTATGCAATCGCAGAAGGGTTA GCAGAAAATGGTGCAAAAGTTGTTATTAGTAGTCGTAAAGAGACAAATGT AGAAAATACACTTCAACAATTAAGATCAAAAGGTTTGGAAGTTTCTGGTT GTGTTTGCCATGTCGCAATAGCAGAGGATCGTCAGAAGCTTTTGGATTTG GTATGAagatttttattgttatttgcaTTAAAAATATCCTTTTACTATCc aactactcttaggttccaaataacccccccccccccttNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccc acttgtaaaatttaaagaattttttcagcttttaaaGAGAATGTCCCCTA TTCTGCTCTAAATATCCttattttagcctatatttaccttattttggggt tttcgtGATTACAATTTCCaacaacccccccggcaattaggtcgtttatt gaaatttttacttATTGTTATTTATTTCTCATAGACATTGAAAAAATATG GCCAATTGGATATTTTGATTAACAACGCTGGGACGAGTGTTGGAATGAAA CCCTTTCTAGAGgtaataaacctttttttaaatctatctaAGAAACTAAA ATGTTATGCTACTAAAAGTATCATTTATAACTGAGCCCTGAAAACCccaa agtcttgaaaaagtaCATCCCGAGAATCGCATTAGGGGATATTTATGCGG GCCGAGAAAGATGATTTTTGAGAATTATTTAAAAATCTGGTCTTTTAGCA CTTTATACtgtggaaaaaaagaacaaaagattTGAATTTGGGGAGGGGAG AAATTGAGgctaatttggcgaatttttgaGTTAATTTACCATATTCgcca aataaaagaaataaattgcTGAAATTTCTCTTAATAGGTTATTTACACTT TCATTTTCCCTTTTTCTAGACAACTCCTGATGAATGGAATGAGGTATtac attctttttttcaaatttaccatTCTGTCAAATTTGACTCTTAAATCTTT GAACAGTTTATTATAATCGTTTTATTCGTCCGTTTCTCTGTCGTTCCGAA TCGTTTTAGTAACTCGCCCGTTCTCTTTTCTGTTATCTACTCCTATtatt caattcatgatattcatatattcatgacgtaatactTCTACGGAAATGGT ACCCAGTTTATACTAGAAGTGGCAGATTTAAAAAACCAGAATGTTTCTTT GGaacatttcatcatgaatattgcGAATAATAGGTACTTCCACGGTTGAA AGTAAtcgtcccagctggcacacaacgttttttcaacgtttttctaacat gcgcaacgtccatataaccttagataaacgttgaaacaacgttgtgtgcc agctggggtagGTGATTTGTTGGTCTGAAATGGTTGAGGTTTTTGTGTCT AACCAACGAGCAGCCGTTATGTGTGCGCAATTGGtcatgattacccatga ttcattggCACCATGAAATCATGAACTATAaactattttcttgttttgta tTTTCCAGATCTTTGCCACCAATCTTCAAGCAGGATTTCAATTTGTAAAA GAAGCATTACCTTACCTAAAGGAAACcaagtaaaatatatttttgtgtaa tttttgCAGTCCACAGAGCCAAATTCTGGACTTttagattttaaaggaaa taaTAAAAGTAAATTCGGTTCGTTTTCATGCAAAATCTGACGCTTTTAGC TGTGATGTTTAATTACGACTTTATTATGGCTAAATTATGGCTTCTTCTCA AAGTTTGTTCCTATAatctttgaaaaggaaaaatcatTGCTCCCTTCATA AAAATGGTATCCAAAAACAGCTGTTTCGATAAGATGATATTACTTTTACT TACTACATGATCTTGTCCTGGAAAAACTGTCCCTTTGGGACAATCAACCG GTCACAGTTGCCAAAAGAATATCGGTTATTATCATAGGACTAAAAATTTG GCACCTTTTCTTTCCAGGGGATCAGTGTTGTTCAATGGTTCAATGACAGC TTACAACCCTCTTCCggtaacttttctattttttactctATAATACCGTT GTTTTTAATAAGAATCCACTTCCCGCACTAAAGTTCCATTGTCACCTTTC CAacggaaaaagaccaggactccTGGTAGTTAAAAATTAAGATTCGGAAT GTTATACAGTTTCCTAAGTCAACACAATACCGGATACCCCGGGGAAAATA GCGGAAATTTCCCGGTAAAGTGAATGGAATCTTAGTGCGGGAAGGAGTag aatcttatgcaaaacgacgGTAATAATTAATAACTCTACAACCGCCCATT ACTGGGCATGGTTGGACATAAAAGCAATGACTCTCGTCAGTGAGGCCTAA TCACTTCTGAGAGCCATGACTCTATTTGGAGCTATTAAAACTTTTCATAA GTTATTTTGAAGTGCAGTGACTGTCTCTtattgaaaccattaccaaagTG ATTTAATCCCTAGAGCCAGCAAGTGTTACTAATTCaataagattttaaaa aatcgTACCGCTAGAAAGGATTTCTTTCAGGGAAGAAACTTTAGCGAAGG ATTTTCGaggaaatttttaaatcttgatGACTTGGcttcttcaaaaatca agaacaaCCAACAATCGTACCACTAGCACCTATGCTAGCACCGTTCACAT CAGTCGAAATCAACAAAGctgttaagaaaatgaaacgaaACAAAAAGCCC AGGATGTGATGAAATACCAATTGAACTGATAAAATTTGCTCCCGAAACTA TCCACCAACAGATAGCCAACATCTATAACAACATAGCCGAAGCAGGGAAC ATACCGAAAGAGATCACGTACGGTATCCTTAAGCCCCTGCAAAAACCCAA CAAAGCAAAAGGACCACCATCAAACTTACTACCAATCGTTCTACTTTCAT CACTACAAAAAATCCTTGCAGCTTGCATTAACTACCGACTTGACGCAGAA AAACCACTCTCTCAAGCAGCATACCGAGCAAACAGATCCACAACCGAGCA CGTCTTCGCGGCAAAACTCGTAACTGAACGGACTATGTGAAGCCGTTCAC TTAATACTTCTTGATATGAGCAAAGCGTTCGACAGTCTTAATAGAAACAA ACTGCTGCATATGACTTGCAATCTACCATCTCACCAGACGAACTCCACAT TATCGCAGTCCTCCTTAATGTATCGCTCAGTGTCAAATGCAATCAAACTC TAAGCTCTGAGTTCGCAACTGACACCGGAGCACCACAAGGAGACTGTAAG TGCTAACGAATTTACGTACTACCTAGCAAAAGCACTACACCCGGTGAAAA ACCACCAAATACGCAACCATCCTGATGCACTTCCTAATGTACCATCCATT CCTGCTGACCATCTAACAGACCACAATTACGCCATTGTCAcagaaaaaga acaaatcgataTTGAAATGGAGTATGCTGACGATGTCGGGNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGCGCACTGCAAAAGTTTAAGCAGACCGTTCCAA CAGAACTAGAAAAACGAGATCTAGTAATAAATCAGGACAAAACGGAACAA TTTACCATCACAAGAAATAACAACGAATAGAAAAAGTGCAAATATCTCGG CAGTATGCGTGATACATCAGAAGAcattaaaagaagaaaaggaataTCGA TTTCAGCTGCCAACAAATTACGAACGTTGTTCTGTCATAAAAAGTTGACT ACACACACAAAAATGTCAGCATTCACGACCTACATCGAACTGATATTCCT GTATAACTGCGAGCTGTGGAGTTCAACAACCTGTCAAGCCGAAAATTCCA TTGATGCATTCCAAAGAAGATTGTTGCGAACTTTCGTGCTAAATGTGAGC TGGCCAGAAATCGTGAAGAATGTCGAAGTGTATCAAAAGACCAACGCAGT AAAgtgtagcctgggaatccaagctcctaatcttagaaaaaaacaaaaaa tacctcacaaagttctaagattatggagcttggtgcaggtagataagtct gacacagaatattataaacagtctgtgtgtgaacccttgttgacagactt tctgaactttggaaacccaggcaaacacacataaccAACTTATCATAAAA ACtgtttcacaagctctaaagactttcaaaactactaaaaaccatatcaa aacatcagccacatgtatttagacacccagccaacagccattctgtttcg aaatgaatgtatgttttcattttcatttgttttcctttttttctgcagag tcagctttttctataaattatgcgcgcgcatcgaaattatcaaaatgcgc gtgAAAGTACTGCCAAGTAATACgtcgaaagctggccaatcaggcggAAC Ctacattgcagggaaaaatctccctgcaggcgagttacctgcgccaagcg ttaaacaagcagcaaaaatatcataaactagactgtggacaaagtttaac gcttggattcccaggctaagtAAAGTGGAGCAAACGTTTCAAAAGTAGAA GACTGAAGTGGCTGGGAACTGTATTACGAGCAAATAGTTCAACACCTATG AGAAAAGCACTCGAATATGCGAACACTAAGTACCAAAGACCGCGAGGGAA ACCAACTACAACTTGGCTCAGTGTTGTCAAAAATGAtcttaaaacataaa atattgaatGGGACGACGCAAtagaaattgcaaaaaacaCTAAGGATTGG AACATTATCATAAATCGTTGATAGTTATACAACTTTTTTCAATTGCTTCT TTTCGATAGTTATCGACAAAGCTGATAATGCTTCAATTCCTTTCGTCGGG AGATATTTTATtatatgtttttattctttgtaccTACCGGTAATATAATC GTTTTTTACGGAAAGACCgattgaatgaatgaatgacttAGCTAGAATTG ACAATGAAAAAAGTTggagaaaaaagaatttgagaAATTATTATCATTGT TTCCTTATGACATCGTTTTAAACACTCGCGCTGACACTTTTAAATATCTC AGCATTTTTTTCTAGATGATGGGTGCGTATTCCATATCAAAGACAGCCAT GTTGGGTATGGTGAAAGCTCTGGCTTCTGAATGTGGACCAATGGGCATTC GTGTCAATTGCTTTGCTCCTGGTATTATTGAGACGAACATGAGTGAACCG GTAATTCATCCAATGTATAGGCATACatacctcgttttgaaaccattact aAGATGATTAAATCTCTCGAATCTTCAAGTGTTACTTTTTTGAATAGAGT TGACTTCTTATGAACTCCTTTGGGAATCGATcgccatagcaatattttga aagcgaggtaagcgttgctcgtgacgtaatttatgaaaaggtctatccaa GCCAACCATTCCCCTATATAGTACGCACAGCTGCAGTACCGTCAACTAGC CTGACAGTGCAAGTCTCAATGACAATCGTTGCCAATGGGGATCTCATGAA GGAGTTAAATCAACAGGGACTAGATCGAAatctaaaattgtaatattcat gatatgcaccactggagagtcttctaagaaattttccacccaatacgtca cttgaaaacaaaataagtattgggtggaaaaaaaaaacagcaaagctgca taatttcgtgaactCATTGCAGtcgtgcatatcatgaatattggATTTTG TTTCAGCATATAGCTTTTTAGACTATATTAAGGGTCATTTTCCAAAggtg ataaaaaatttttttttctcacctCAGGGGTTATTTTTGATCGACTCAGG AACAGCTCAACTTTtctatttaaattttttcattattctaACGGTCCTCT AAGCTGGAGCTTATCTTTGTTAAAATCGTTTCATCATGTTACAGGCAACG TCAAACAAGGAATTTTGTGAAACATGGACGAAAGCTATCCCTTTGGGAAG G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072982TCONS_00072982Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072982-proteinTCONS_00072982-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1415986..1422936 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DHRS2dehydrogenase/reductase SDR family member 2, mitochondrial isoform 1 Homo Sapiens
DHRS4dehydrogenase/reductase SDR family member 4 isoform 1 Homo Sapiens
DHRS4L2PREDICTED: dehydrogenase/reductase SDR family member 4-like 2 isoform X1 Homo Sapiens
DHRS4L1PREDICTED: putative dehydrogenase/reductase SDR family member 4-like 2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.31 13.02 13.84 10.86 2.48 1.86 3.21 3.18 2.88 2.07 2.82 2.22 2.68 1.93 2.98 3.02 3.61 3.57 1.82 2.62 2.35 2.36 5.4 4.85 7.19 5.24 2.74 2.98 4.22 4.59