TCONS_00072982-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072982-protein
Unique NameTCONS_00072982-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length218

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072982-protein ID=TCONS_00072982-protein|Name=TCONS_00072982-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
MPVISKRLDGKVAIVTASTAGIGYAIAEGLAENGAKVVISSRKETNVENT
LQQLRSKGLEVSGCVCHVAIAEDRQKLLDLTLKKYGQLDILINNAGTSVG
MKPFLETTPDEWNEIFATNLQAGFQFVKEALPYLKETKGSVLFNGSMTAY
NPLPMMGAYSISKTAMLGMVKALASECGPMGIRVNCFAPGIIETNMSEPA
TSNKEFCETWTKAIPLGR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045265XLOC_045265Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072982TCONS_00072982Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 86..97
score: 55.91
coord: 159..178
score: 33.62
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 159..178
score: 36.12
coord: 215..218
score: 11.39
coord: 133..149
score: 23.17
coord: 86..97
score: 59.01
coord: 180..197
score: 44.75
coord: 12..29
score: 45.21
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 11..203
e-value: 1.4E-50
score: 171.4
NoneNo IPR availableGENE3D3.40.50.720coord: 47..218
e-value: 1.7E-47
score: 161.4
coord: 3..46
e-value: 2.5E-10
score: 39.4
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 146..174
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 9..218

Blast
[Close]
BLAST of TCONS_00072982-protein vs. Swiss-Prot (Human)
Match: DHRS2 (Dehydrogenase/reductase SDR family member 2, mitochondrial OS=Homo sapiens GN=DHRS2 PE=1 SV=4)

HSP 1 Score: 176.792 bits (447), Expect = 4.239e-55
Identity = 87/211 (41.23%), Postives = 137/211 (64.93%), Query Frame = 0 
Query:    8 LDGKVAIVTASTAGIGYAIAEGLAENGAKVVISSRKETNVENTLQQLRSKGLEVSGCVCHVAIAEDRQKLLDLTLKKYGQLDILINNAGTSVGMKPFLETTPDEWNEIFATNLQAGFQFVKEALPYLKETKGSVLFNGSMTAYNPLPMMGAYSISKTAMLGMVKALASECGPMGIRVNCFAPGIIETNMSEPATSNKEFCETWTKAIPLGR 218
            L  +VA+VT ST+GIG+AIA  LA +GA VVISSRK+ NV+  + +L+ +GL V+G VCHV  AEDR++L+   L+  G +D L+ +AG +  +   L T+   W++I + N+++    + + LPY++  +G+V+   S+ AYNP+  +G Y++SKTA+LG+ + LA E  P  IRVNC  PGII+T+ S+    N+   + + +   L R
Sbjct:   34 LANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNESLWKNFKEHHQLQR 244
The following BLAST results are available for this feature:
BLAST of TCONS_00072982-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHRS24.239e-5541.23Dehydrogenase/reductase SDR family member 2, mitoc... [more]
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