XLOC_045241 (gene) - C. hemisphaerica

Overview
NameXLOC_045241
Unique NameXLOC_045241
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:816110..823828+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045241 ID=XLOC_045241|Name=XLOC_045241|organism=Clytia hemisphaerica|type=gene|length=7719bp|location=Sequence derived from alignment at scaffold_86:816110..823828+ (Clytia hemisphaerica)
CCTTACTATTTGGTCAAACCGATACCCTGGTTATTCTAACAGAAAATGAA CATTATACAAAAGAGTTATACACGCAACAATGTGTGCAAAGGACACCACA TAAGATATGGTTGGTACCAAAGCTGATGCAAAAAGAATACTTTGAAAACA ACATCGAGAAATGGCTCAGAGATGGAATTCAAAAATTTGTCATCTTATGT TCGCTGGAATCGACATCTTTGTTATTAGAATTAACCAAAGGTTTATTAAT TTCAAGTTTAGAACCTTTATTTTTCATTACCAGTCGACAGCCAATGTATT TCCTGGGAAGTTTACCGAGTATGGTGGTGGCTGTTGAAGATGGCAACAAT GAAaagtatttgttttttttttcaatccagCCCTCTTTAGGCAGTAAACG TCCGAGTAAACGTCGATCTCAGATCTTGACGAGAATTCAAAACATTAATA TTTTGTACACCGATTCAAGTGAACTGTTAAAGTATCTTTTAAAGTAAGAC CAAGACGATCAGGCCAAGTtggtggggatggaaaaatgaCTTAATTATAA GGTGACTGAGAATCCAAACTTTAATATTTTAAATGTAAAATGCTTTAGTG GGTGGGTGAGGCGGTGATGGTTTCAAGGGTTCTTGTTTTTTAAAAGCATG accaatgggcttttccagaaagacTTTttaccccactgttgaggatattg atttttcgaagtatcgaaacccctggatatcctactttattattAAAGAC CCCTGGatctccactcttaaaaatatgctcaccccctggatattctttct ataaagatgcttacctcCTGGATATCGTatcttttacttgaaaagacact ttaccccctggatatccgattcTGGAAAGTCCAATCTATTCAGTTCATAT TAATCTTTCAGCTCCGGTGATCCGACAGAAAAGAACTTTGACTTCTACAT ACACGATGCAATATACCATAAATGGAGGACCATCAACTACCACGACCTTA TGCACCAACATTATACCAGTCTTGAACTCCGAGACCTCATCGAATCATAT CCACTTTCATCATTCGTACAGGAAAATTACCAACTGCAATTGAGGGTTGT AACAGTAGTTGAAGAACCTTATATGATGATTGCtaatttttcgaatgttt ttgaagATGGTTCGTGCGTTGTTGGTAAGATTTGCTGGAAGCCAAACAAT AAAGGACCATATTGTTGCATTGGTTATTTGATCGATATGCTGGAATCGTT AGAAGAGGATCTAATGTTTCAatcttatttatattttgtcGCCGATGGAA AATATGGAGAAATCGTGAACGGTTCTTGGGTTGGCATGGTCGGTGATTTG GTTAAAGGAAAAGCCGATTTAGCTTTAGCCTCGTTAACTATAAACACAAA ACGATCTGAGGCTGTAAGCTATTCACTACCTTTCCTTGTTGGTGGTATGA TATTGATAAGTATGCTGGAAGAGAAAGCGCTACCTTTTGCTAATCTAGAA CCTTTCAAAGCTATCGCACTTGATTTATGGATTGGAGTTATAGTCGTACC GAGTTGTACCGTATTAATTATTGTAATTACGGACAGGATAGGTGCCGGAA AACAGTACGCTCTTCGTGAGAGTTTTACCTACATTATGGGCTTACTTTTC CAAAGAGACATGGGCGGTAAAAATCCAATTAGTTGGAGTTCGAAAGTCAT AGCTTTGAGTGTTGCTATGTTTACCTTGGTTGTCATGTCAACGTATACAG CATTGTTGACAGCAAATAGTGTAACGTTTACACGAAGTCTTGGAATATCT GGATTCGATGACCCAAAGGTATAACTTACTATTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNATTGGTTATTTGATCGATATGCTGG AATCGTTAGAAGAGGATCTAATGTTTCAatcttatttatattttgtcGCC GATGGAAAATATGGAGAAATCGTGAACGGTTCTTGGGTTGGCATGGTCGG TGATTTGGTTAAAGGAAAAGCCGATTTGGCTTTAGCCTCGTTAACTATAA ACACAAAACGATCTGAGGCTGTAAGCTATTCACTACCTTTCCTTGTTGGT GGTATgatattgataagtatactgGAAGAGAAAGCGCTACCTTTTGCTAA TCTAGAACCTTTCAAAGCTATCGCACTTGATTTATGGATTGGAGTTATAG TCGTACCGAGTTGTACCGTATTAATTATTGTAATTACGGACAGGATAGGT GCTGGAAAACAGTACGCTCTTCGTGAGAGTTTTACCTACATTATGGGCTT ACTTTTCCAAAGAGACATGGGCGGTAAAAATCCAATTAGTTGGAGTTCGA AAGTCATAGCTTTGAGTGTTGCTATGTTTACCTTGGTTGTCATGTCAACG TATACAGCATTGTTGACAGCAAATAGTGTAACGTTTACACGAAGTCTTGG AATATCTGGATTCGATGACCCAAAGGTATAACTTactattcattttttta tctACACGTATCAACCTGCGGGTGAATACACAGGATGCGAACATGTGATT ACTccaaaaagttcacgtgattttattcccatgttccTTGTTTTACAACT TAacgctgataactttattagtgtcaataatctcgaaccaatcagaaata aatgtcatgtaacaagcacataaaaatttcgaataaaagcgtgatttgtt atcagactttaattttgcaaccgaTGTATTTGCagttttttattagtttt tgcattGACGTTTTTATGATTGGGGTgccttaaaaaaattttttgcgtcT TTACCTGATACAAGTTTCCGCCACAATTTATTTCTTTTAATATACACTGG TAAACTTGTTTATGGTTAATGGATAAATTCATATTTGAtttctttagaac aacaaactatataagaaccatggccaaaatatcaagaacaagctaagaac aatttaaggctttgtggactctaaaacacccgatttcttaggaaaattgg caaaaacacTCACGGCAAAAATAGTCTAggcaaaatggtgaaattaagaa catttttaagacttgaaactccaaaagttaagaacatccgatggcttcaa aaatgttggatgttcttataaaaaacggttttctttTGTGACAAGCCTTG ATCCCAAACATTAGGGAACTATAAATGGCTCTTTGAACGCTTTCTTCGTT AGAAAGGATTTTTAACATACAAAGAGTTATCATTGGACCGTTTTAAAGGG CCCGTTCAAAAATAGAAGTTCCAGTGAAATAACCTCGAAAAATTTACGAA CAATCGAACAGATCAATTTGTTGTTCAAATGAACTTGATATCATCTCAAA GATAAATAACTAATTGTGGTTTCATGTGTAATTCAATACGCAGTTAAATA CATTGTTATCGTTATCGAGAATTTCGGTCGCATAGCAACAAATTAGACAA TCCTCTAATGAAATGCATTCCTTTCGCTTTCTCATTTTTTGTATCTGGTA AGAACCGGTATCCATGAACCTGGCATTTACTGGTTTCTTCACCCCTGTGT GACAGACACANATTGGTTATTTGATCGATATGCTGGAATCGTTAGAAGAG GATCTAATGTTTCAatcttatttatattttgtcGCCGATGGAAAATATGG AGAAATCGTGAACGGTTCTTGGGTTGGCATGGTCGGTGATTTGGTTAAAG GAAAAGCCGATTTGGCTTTAGCCTCGTTAACTATAAACACAAAACGATCT GAGGCTGTAAGCTATTCACTACCTTTCCTTGTTGGTGGTATgatattgat aagtatactgGAAGAGAAAGCGCTACCTTTTGCTAATCTAGAACCTTTCA AAGCTATCGCACTTGATTTATGGATTGGAGTTATAGTCGTACCGAGTTGT ACCGTATTAATTATTGTAATTACGGACAGGATAGGTGCTGGAAAACAGTA CGCTCTTCGTGAGAGTTTTACCTACATTATGGGCTTACTTTTCCAAAGAG ACATGGGCGGTAAAAATCCAATTAGTTGGAGTTCGAAAGTCATAGCTTTG AGTGTTGCTATGTTTACCTTGGTTGTCATGTCAACGTATACAGCATTGTT GACAGCAAATAGTGTAACGTTTACACGAAGTCTTGGAATATCTGGATTCG ATGACCCAAAGGTATAACTTactattcatttttttatctACACGTATCAA CCTGCGGGTGAATACACAGGATGCGAACATGTGATTACTccaaaaagttc acgtgattttattcccatgttccTTGTTTTACAACTTAacgctgataact ttattagtgtcaataatctcgaaccaatcagaaataaatgtcatgtaaca agcacataaaaatttcgaataaaagcgtgatttgttatcagactttaatt ttgcaaccgaTGTATTTGCagttttttattagtttttgcattGACGTTTT TATGATTGGGGTgccttaaaaaaattttttgcgtcTTTACCTGATACAAG TTTCCGCCACAATTTATTTCTTTTAATATACACTGGTAAACTTGTTTATG GTTAATGGATAAATTCATATTTGAtttctttagaacaacaaactatataa gaaccatggccaaaatatcaagaacaagctaagaacaatttaaggctttg tggactctaaaacacccgatttcttaggaaaattggcaaaaacacTCACG GCAAAAATAGTCTAggcaaaatggtgaaattaagaacatttttaagactt gaaactccaaaagttaagaacatccgatggcttcaaaaatgttggatgtt cttataaaaaacggttttctttTGTGACAAGCCTTGATCCCAAACATTAG GGAACTATAAATGGCTCTTTGAACGCTTTCTTCGTTAGAAAGGATTTTTA ACATACAAAGAGTTATCATTGGACCGTTTTAAAGGGCCCGTTCAAAAATA GAAGTTCCAGTGAAATAACCTCGAAAAATTTACGAACAATCGAACAGATC AATTTGTTGTTCAAATGAATTTGATATCATCTCAAAGATAAATAACTAAT TGTGGTTTCATGTGTAATTCAATACGCAGTTAAATACATTGTTATCGTTA TCGAGAATTTCGGTCGCATAGCAACAAATTAGACAATCCTCTAATGAAAT GCATTCCTTTCGCTTTCTCATTTTTTGTATCTGGTAAGAACCGGTATCCA TGAACCTGGCATTTACTGGTTTCTTCACCCCTGTGTGACAGACACACTGG aatatttggccaaaatttcgtccccggtggtaaAAAGACCCTACAATTTC ATTAAttccgttaaaaaataaatttcaatgtaaaaaattgcactccaaaa ccatcccaactgTAGTTTTTAAAGCTTGAAACTATAGAATTTCTATCACC ATTGGGGTTTCGTTGGAAATTTTCATTCCCACTGTGGGAGAAAGTTCATT GGGGTGTGAGACAAGGGGTTTTGTTACTGGCAGTGGGAATGAAAAATTAG GGAGACTTGCTTGTAACGATTACACGCTTTtgtataagaatagtgtacag tatatccatttcatcatggatatttttaacattttggtaaaaatcatcct aaaatgcCATAACAGTATTCTCAGGATCTAAAGCAAACCTAAATTTAAAA CGTTATGCCaagcagtggcgtggtgggaaaatttctctggggtagccaag gcaaatatggtgcccttttaaaagattttttgtttttggcgcccctctat ATACGCTCATTTTACTTACGAATACAATacaaaaaagggagtgtgcgagc gaagcgagccagaaagtttttgaggtgatgaggggcgccatttttgtttt ttcatttgtcaatctttcgatatgggcgcctgaaaaatccttcttggcgc cccttatttttgggcgccccctctcaaaagggctccgctgggggggcctg gCCCCTCtggcccccctgccaccacgacACTGATGCCAAGCAAGAATAAA GTGTTGAACAACGATAAAGAACATTTGGCCATttcgatgtaaaaataaaa aatgccccAAATTTAGCCTAAATTTAGCATTCTTAGATTCAGTTTGTTAT GATGGTAATATTCTTACTATATTCTTAATTCTTTTACCAATTTCATAATA TTCTTATAGACTAAATTCTAACAAGAACTGTCactttttaaaacttgaaa accaATTGGATTCATACTTAAATTTGATTGGTTTCCtcttatttttatat tatttagaTCAAAAATCCAACACGAGAGTTTCGTTATGGTACAGTTGCCA ACTCGGCATACACCCAATTATTTGCCAACAGTCAAGATCCTGTGTGGAAT CGAATGGCACAGTTCATGAAAGATTACAATTTTACAAATACATCAAAAGC GTTTGAGCAACTGGCTACTGGGTATGGACCATTATAGTCTTAACTTAAAT CTCCCTATCTTAGAATGCCAACACAGAAATAGCACAATGAGGTTGAAGGT TTTTGAGAAATCAGATCACTAAAAATCAGATTACAAGATGTTCACTCCTC GTTTTCTGAAAAAGACTATTTTTGTCTCCCTTAATTTGTCAATGAATATC AGATTGCCAATTCTGTGTTCGAGTTTATTTCACTAATCAATCATTTTAGA GAACTGCAAGCTATCATACACGATTACTTCATTGCATACCACAATATCGC TAAAGACACAAACTGTAGATTCAAATTTGCTGGTGAGTCGATAAAAGATG GTGGTTCAGGGTTGGCTGTACAAAAAGGGTCAAAACTAGCTAACCAAATC TCCACGctaattttgaaatatcaagaccaagaattttttttacaactgca acaaaaatggatggaaaataaATGCGTTGAAACGTCTAAAGGATCGTCGC CAGGGGCAACCAATAATAACAATGTAGTCGTTCGAATCGGTAAAGAATAT TTTGGGGGAGTTTTTATTGCACTTTGTGGAGTAActttaatttcttttgg aatATTGGTTGTAGAATATTTATTGAATCGAAAAATTCACACAAGAACTT ATTGGGTTTCTGAAAGACGGAGAAAAAGATGGAGAAGATATTGAAATTGT TGGAAggaaaagctttatttaagcttTTGTTGCTTTCTCTCGCGAAATGa tcaaattcatgatattcatgacgtgatgttctctacggaaataccccggt tttagccagtagtggaaAATTTatactagacaaaagttgtagaaaatttg ccactactggcaaaaacggGGGTCTTctcgtagaaaacattacgtcatga atatcatgaatcttACTGAATGAATTTCCGTGATAATGGATACTTATTAT TTTGTAGGACGCATTTATCAGTTTACACTTATCACCAACTCTAACACCAT AAAGGTATCGGGTTTGAGTTAAGCAGGTTTGGAGAAGACTTCTAAGTTCT CTTCAATGCAACGACCATGTTTTACGCAATTTAATCCGGGTAGACTGGAA TCCAATCTTCTTTCATATAGCTTTCGAAGCATAAATTAACTAGATTTTTA CGAATTTATAAAGCTTAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072922TCONS_00072922Clytia hemisphaericatranscript
TCONS_00072923TCONS_00072923Clytia hemisphaericatranscript
TCONS_00072924TCONS_00072924Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072922-proteinTCONS_00072922-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:816110..823828 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13 0.12 0.09 0.11 0 0 0.86 0.98 1.32 1.72 0.71 1.26 2.34 0.87 0.07 0.1 1.45 1.63 3.65 5.38 2.99 2.24 1.04 1.87 1.35 1.63 0.78 0.74 0.02 0.16