XLOC_045220 (gene) - C. hemisphaerica

Overview
NameXLOC_045220
Unique NameXLOC_045220
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:331304..337796+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045220 ID=XLOC_045220|Name=XLOC_045220|organism=Clytia hemisphaerica|type=gene|length=6493bp|location=Sequence derived from alignment at scaffold_86:331304..337796+ (Clytia hemisphaerica)
TGGTATTATAACGTTTTGCactcttttgaattttttcatagacccttaat tttattatatttttcagcAAATGAAACAAAGCAAGATTATTACTAAACAC CTTAATATATTATGCAATCATGTGCTTACCTGATTGCAATATGCATTTTG TTTGCCTGCACTTCAGCATGGATGGACAAAGAGGAAAGGCTCAAATATAG GTAATTTGACTATTAAAGTTTGTGAATGAAATTTGACGAACAATGGTCAC AAAAAGTTTCATGTCATTTGTTaactttggttaaaatttcataaaatggg aGGGGTGTTGCACAATTAAATCACGAAAGATTGCAGAGTGACTATAATAG TGGCCATCTGTCACTAATGATTGCATATCCTGTAGAGtagaagatatgac gtagcctagacCTATGAATTTAATGTCTCCTCTTCATCACTTTTAGAGAG AAAGCAAGACAAATGTTCTATCATGGCTATGATAATTACTTGAAACACGC ATACCCTTATGATGAGCTGAAACCTCTTTCTTGCCAAGGACAAGATACAT GGGGAAGGTTTGTATAGGAATGCTTCGTTTATATTTTGATATCTTTGAAT TTATCAAGACTTTTTTTACAGTTGCaacctttattttttttctattaaag AAGCTAcatcttttatcaatcaattTTAGTTATAACCTACCTGAGAGCTT AAAAGGGAATTATGTCTGAATTATTGAAAAGGCATTTATTTAAGGAAATA CTGTATGTTTGCCAACTCAGATTCGTTCCTCTTTTCAATTGCAGCTATTC TCTGACTTTGGTCGATGCTCTTGACACACTGTTGGTGAGAAATATATTTC CTAGTTTTTAAATGTAACAATCTGGTTCACTCTCACCAAACCCTATTTGC AATAAGACCTCGAGTGACATCCATTCCAATTGGGAAACAGTGAAATTATT TTAATAAGTGACTGCAGGACAATGATAGCAGTGTGCTACAGTGCACGAGG TTGTCAGCCTCTACCTGGGTCATACCAAATAATCACAAATAATCACAAAA TGTGACTCTGCTTATAATGCTCAGCAAACAAAAAGACGAATCAAGGGTAC CTTTGTGAATTTAGAATTTCAGTGCATATGAAGTTATTAATCTTTTATTT TAACTCACTATCCCTTCTCTTTGTTTAGGTGATGGGAAATGTCACAGAAT TTGAAAGAGTTGCAAAACTTTTAGTGTCAACATTATCTTTTGATCAAGAT ATTAATGTTTCTGTCTTTGAAACAAATATTAGAGGTAAGAAAACTCACCA CTGTGTATGCTTGGGTGTATGGGTATGTTGATATTCCACCTGAAAGAAAC TGAAAGTTATAGCGTAAGAACTAAGTATGGTATTTGCAGAAAAACTAAAC TTCTCGTTGCGTTTTATAAAGATAATGAGTTAAATTTGTTCTGTGTTGAA AATCTTACTAAAGTAAAAACTGTTACATactacaattttttttgtctaaA GCCTTCATTATTCATTAATTTACTTTTAGTGGTTGGAGGATTGTTGTCAG CTCACTTGCTTTCGCATTTCTCAAAACTGGAATTGGACCCTGGATGGCCA TGTGAAGGACCATTGCTTAAACTTGCTGTAGATGCTGCTGAAAAGCTTTT GCCTGGTATgaaatatttagaaaataatTGTCGTGGTAAATATTATATAG GACTGTCTTGTTTTGTTCAAGCTAAAACAGCTTTGGAACCTTGTTTTATC TGTGCTCACTTTCCTTGTGTAATCATCTTTTGCATTTTATAATAAGAATT TGGCATATTGCAAAAACCTTATATGGCCAAGAAGATCCactaaatttttt ggaaaaatacaaCTTAAAAGCCTTGAAAACAGAATTCTATAGATACCATG TATTGGTGATGATTGCAATCAGGTTGGGGACTTTTTTTATTACTCGTTTT GGAATTTCAAagcttgaagtttttttaattgttgAAAATCTGATCGTTCA GAtacaataacttttgatcataCTAAAACAGTATAAACTCTGGTCGAGTA ACATTTATTTTGGACTGGTGCTATAAAGTCATTATTGTgtcttgattttt attttattttttctttgcagCTTTTCAAACCAACACCAGTATGCCATATG GGACAATCAATCTCAAAAATGGTGTCCCCAAGGGTGAAACGCCTATCACT TGTACTGCAAGCATTGGAACATTTGTACTTGAGTTTGGTACTATCACATA TTTAACAGGTAATTTCAAGATGACTGTAAAGTGTTATCAACTTGAACAAT AAACGAACAATATGATGAAATTAATGCTTCAATGTTTTTCAAGTCATCTT GGGCAAACCTTGTTTTTTAATTAAGATAGACCTTTTGGGAGGACCTTTAT TAATTAATTATCTTGAACTTCTTTAAGACCTTCTATGATGAtgaaacaca aaaattgcacAGCTAATCAAAGGAAAAACTTTTGTCGATCAACTCGATAA GTAGGGAATAATTTCTTAGTAAGTAACCATGTCTAAATTGTGAATATTTT CTCATAAGGGGATTGAATAATATTATTATTTCTGACCACTTATTTTGTCT TAATTTTCTTACACCAGGTGATGAGAGGTTTTTGAAGGCAGCATTGGATG CACTTGACGGGCTATGGAAAGCCAAATCTAAAATTGGTTTGGTATGAATG CATTTTACTTTAATGGAGTTGATTTTCACGAGACCTAAATAATTATAATA AAAGTCAGCATTATAAGCATCACAAACTTATCATTCAACCCTATCTGCAT TTAATTCTTGACAAACATGGGAGTGATATAAAATTACTTATGTTTACGTT TTTGAGTAAGCTGTGCTCTAAGATGCTCGAATGTGAATATGCCTAAAAAA TCTGAATGCTTAATTTGGAGTGACAAATATCCATAGTATTACTTTTGACT TTTGACTTAAAAAAGTGAATAAGTTATGGCATGGCAAGGAATCTTTATGG ATGTAATTTTTGCTGTAGGTGTTTTCCGTAATCTGTAATGAGTTTTATTT GTCTTATTTCAAGGTTGGAAATCATATAGATGTTCAGAAAGGCTTTTGGA CAGCGACAGATGCAGGGATTGGAGCTGGTGTGGATTCATATTTTGAATAC CTTGTCAAAGGGGCGTCTCTTTTCTCCGACCCTAAACTTCTGGAAATGTT CAATGGTGAGATTAAATGGATGTTTACTCAAATCTTTTGAACAAGTAGTG ATTGAGTAGTGACTTTTTTCTGTCTATATCTGCTGGTAGGTGTCCTAATC TGGAGTCTTGTTAATTAAACATAGCTTTTCTAACTTTTCTAACCATttaa atcatattcaaatttctaCTTTCTGTTTATAGATTTGAATAAGTCgatac aaaaatatttgaaatatcaTGATTGGTATGTTTGGACAAATATGGATTCT GGGAAAATCACTCTTCCCATTTTTCAATCGTTGGAGGCTTTCTGGCCTGG TGTCCAGGTATTTGTTACACTCCTAACCactaaacttttatttatacagt ATACCAATACTATTTTGCATTTTGATCTTTTACATGAATCCATCTTAAAT AATTAAAAGGCTtaactaccgggtgcgccacaaaaaagtttctctctttg aaactaattttctcaaaatctaaaatttttaaaagaaccgctcctatttc attggaaagaagaaagatagacttagattttgatgggtcatttatttaat tcgattcattagattaaaagttatgctcaattgaatgaaaaagttacttt cagaaagtgctcgaaaacgtcaaaaatcgatctatcaaatttttacttta aatttggcaattgcaatagcctttacatagttaagagcatttttccgtaa caaaacacataaattttgaaatgaaagggTCGAAAGGGTCTAAAATCCTC ATCAACATTAATCTAATTTGGTTTTACTGCAAtatttcttagatttttgg ttctagactggataaagtctatgtaaggctggatctacctcgaaacccat atttgatgtatttttatgaattttaccagattatttggcctttttcgacg aattttcttcctttcattgaaattcaaccttatTTTAAATAagttcaacc ttcctttaaataacaaaaggtcatttagacagctaattatcatttttaac gactgaaacgaaaatagtGATGTACCATATAactatgcttctgtttaatt tgataggtcgatttttaacgtttttgagcattttctgaaagtaacttttt tattcaattgagtataacttttggtctaatgaatcgaattcaatGAATGA cccaccaaaatttaagtttatctttcttctttccaatgaaataggaatgg ttcttttaaaacttttagatatcgagaaaattagttttaaagagagaaac ttttttgtggcgcacccggtagaattACTCAGGGTATAACAGTCACTGGA ATGGATTATGCATTCAATATTTCCACAAAGTTATGTCTATGTGATGGAGA AATTCAAAATGAGTATAAATTCATATGGACGGGTTCCTCCGAAAACTGTT CGTTGTATTTCACAACATTTTTAATCTAATTTCTCTCAAATTTTTCAGGT ACTCCTCGGAAACGTCGGGGAAGCCTCAAGGACGTTTTATAATTATTATT CAGTGTGGAAACAGTATGGAGGAACACCTGAGTTCTATACTATTGCATAC AATAAAGTTTTTCCTAAACGAGAAGGTTATCCACTTAGACCAGGTATTAT TTCATCAATTTAAGTAGgcattttctttaaaatcgTATGAGAGAAGGATt cagatgattttttttttgaataattagatatattattttagatttatggC CTTCAGACACCTTCTATATTATTACTGagaaaaaatctcgaaaaatagGA GATCTGgactattttttcaagaatcaTCTGCCTATCCTGAAAGTGAATCT TGAGCCATGTTATACCCACCTAGACATCATTGCCAAGATTTCCACAAAAA ACCTCAAAATCCCCACTTTCAAACATTCTAAAATCTATTTTACCTTCTAC AGAGCTGATAGAAAGCACGATGTACCTATACCAGGCAACGAAAGATCCGT TTTTTCTTGAAGTTGGGCGTGATATTATAGATGGTATTGAACAGATAGCA CGAACGCCTTGTGGTTATGCCACGGTAAGTACATTCAATGAACTTTCCTT TTATAAACTCGAAACATGTTAAGGTTTACCAGAGCGGGGTTTTTCTTACC ACTAGGGCTTAAAAAACCCGATGAAGAATCGGCTTTTTAAGGATGATGTT AACGCTAACCAGAAtctaagtggagaaatccagagaAAGAAGTGGCGCCC ACCCCTACTTTCGAGTATGCACTCAGCCTTCTGTTCAGCCTCGACTGCGA TCGAAAACTAGCTTACTTAGAGCTAATCATGTTAAtcgaaataatatttt ttacgATTCTTTTAAATGTTTGAAACTAGATTTTTACTGAACTTTAGTCT AGTGAAGTGTAAATTATGTCATCCAGTCGATAAAAGCCGAAATAGGGTGT TTAAGACTGATGCATCGGTTCATTACGATGGtttcgattttttaaatttt cagatcaaAAACGTGGAGACACACCAGCTTGACGATCGTATGGAATCATT TTTCTTAGCCGAAACTACGAAATATTTGTACCTCTTGTTCGATGAAGATA ATTTTATacataaaatcaatcaaaatcaaagtcattaTCAACCAAAAGAC TCGACTCAATGCTTTCCTGCAAGCTCtggttttattttcaatacaGAAGC CCACCCGTTGGATTTGGCGAGTTTATATTGTTGTAAGCACAAGCATAAGC AGGATAGTTTGTATTTCACGCGCGAGAAACTGAAACCCCAGTATGGATGC AAGAGGAGgccaaaatatcagaaattttatgcttttgGGAATTATAAAGA GGACAAGTATGATTTATTTGATAAGCCGCCATCTTAGGATGCGTTTACAA ATCTAGTCGAATTTTCATAGTTCAGTTTTCAATGAATTATTAGTTATTTA TAGTTTTTGAGAGGTCTTCTTGTTTCACACAAATGCACTCATTCATGACT AATTTCTTGGAAAGGTTGGTGGAAAAGTAGTACTTTTCTTATATATAATT CTTTTCCGGCGATGCTATTATAGCGCTCTGGAACACAAGGCTGAATTAAG TCCGAGCACCTCTTATTAAATAAGTTTCATtaggtttttagaattttgct aTTGTTGGAATTAAATTTGGGTGGGTTTGTTGTTAGAAACATGGACAGTA ATAGTGGGAAAATATTAGGTATTAATTTTACTAGTTTTATATATAttcct gttgaatttatttgtTAATATACAtactattttttatttcatatcaTTTA TCAATTTGATAGAGAAATTCACAATTACAATAATAGATGTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072869TCONS_00072869Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072869-proteinTCONS_00072869-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:331304..337796 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EDEM2ER degradation-enhancing alpha-mannosidase-like protein 2 isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.64 45.01 14.9 8.38 11.35 8.93 11.19 12.72 11.1 11.24 11.72 9.23 12.93 10.75 11.22 16.21 17.95 15.18 7.93 10.99 8.09 9.09 26.03 25.23 10.22 12.99 19.81 15.5 20.87 19.73