XLOC_045210 (gene) - C. hemisphaerica

Overview
NameXLOC_045210
Unique NameXLOC_045210
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:171470..176137+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045210 ID=XLOC_045210|Name=XLOC_045210|organism=Clytia hemisphaerica|type=gene|length=4668bp|location=Sequence derived from alignment at scaffold_86:171470..176137+ (Clytia hemisphaerica)
atagaggtatgaaaaatttataaaaaatgggTTCAGTGCATTCGCTACAG CGTAATGAGCCATTGAAAAAAGATCAGGTGAAATATGTTAAAACGATTGC TTATTATGTTCAAGATTTGAAACACTTACCTCGAGGAATGACCAAAGTCT TGGATCACCTTTATCTTGGTAATTGGCAAGATGCAACCGATGTTGAAAAG CTACGAGAAGTAGGtgagaaatcattttctttttcaaaaacctatGCTTT ATCTTCTCAAGGAATTATCATAGGTGGTTTTAGACGCTGTCGAACTTGTC AGGGGAAGAGATTTGTTAATTAGTTAGATTAATTGCATTTTCATTGTCAa tacgagcgttgcactccttcgcatgtttccgacgtacttgctctactttc ttaaatccgccagtggCCATGGGTCTGCCTTGGAACTTTACCAAGGCAGG GCTAGTGAAAATGAAATCTAAAGCCTCAGTAAAATAAAAGctcatttctt tcttttatcaaTTTAGCCACTTAACCAAGTGCTACTGGCATCATTTGCTT GATCTTTTCGGTCCTATATCGCtagacacccctttctcacagacccggta ggatattttcagccagtggggataaaataacggactaaaagtcgacgggg attgatattcccatattttcatggctggggatttcatttcttttgttttc aagtcagcaAATTCATGGcaatttatttgattattttcaatgggacAGAA ATTAGAGGAtcattttccaccggggacgatattttggccattttttccat tCGGAAGGGTTCCCAGTAGATCTGTGGGAAGGGGGTGTCACAGGTCATAA TTTAAGAGCACTTCGACTCATGGCGCTCTGTTTTTTACCCTACAATTAAA AGGCAGTTAAGATTGCTTTTTTTCTTAGTTGTGGTTGAAATCTGGCATAT TTCTTCCTCGGGTATtttatctgggggtgttttttttttctccaaatagt aggggccaagcctggggttctGTGACATCTTTTTTTACGACCTAGCCGGA TTAGGCCTGGAAAAACTTTTCATGATCAAAATAGTgccgccataggcaaa actgcaagggaaaataaggggtagagaaatagcttattttcgcgtgaaat tctgagcaaaaactttattacaacaactctctgactaaaacacacagtCG GGGTACCTAAGGGCACTCCCGAATGGTCTCATGAAGCttgtaaatgtttt ttaggttttttcgaagcatttcgATATGGAAAATAAGATGGGGTATGGTC AGATGGTCCCACTtgttgaaaaatcgaaaaatttcgaaaaaaactctttt taccaaattttcatgattttgatgacgtcacagaaaTAAGAATTTAAATA ACTTCTATTAGGAGAAAGATTTTCACCATAAAGGTGTAAATCAATAAAAG GAAGCGAtccacgaaaaaaaaattaaaattctttgctgacgtcagcaaat tttgtgaaaaaaccgTTTCGGCtaaaatatgctgacgtcagcaaatgatt ttaaatttcCTAGGGCGAATATCTAGAGGTCTTCttttcgtttttcaaaa atttagatttttgaggCCTGTGCATAGGAGTTTTTCGCCAAACCTAGGCT GAATAAGGAATAAATATTTATGGTTTCAATAATGAGTTTTTAAGTTAGAT TTTCTTGCTACAatcttaaaataatttgaagctattgaagttgagcccag tgcgttaaGCGCATTCGACTATTTTTAATCGAATTCGAGTTACATAAACc ttttcattaaaataataaattacgtcacgaaaatCACTTGCCTtctattc aaacaattaccatcgTGGTGAGTATGTCCTTTGAGACAGTAAATGACTTT GTTATGAATAGGAATCAGTTTTAATAAAATGCGCTGGGAGTCAATCACCA TAGGAATAATTTCAAAAGGAGGCAAGTGAttttcgtaacgtaatttatga aaaagtctattgCTAGCgtgcacctcactaaaaaccgggatttttcatct cgtctcttagtgagttccactttgacgagtttcgaaaaatagaagccttt caagtgctttgacgcaaatttgattattttgctactgcaggagcttcgaa agttaaaagtgacgtcaaaaaatcgaatgtttagagcccgaaaacctggg ctcaaaacattcaaaaaagtcgcaaagtggaatagacgtgtAAAAAAACG CgagtgacgtctagtataggctagtcTATTGCGTGCttgttaaaaaagtt aaaagttctGCGTGAGTTGGATATTAGCCACTGATATATCAATGATCTGG ATTTTTCACCATCTTATTTTCCAGGAATCACACACATTATCAACACAGTC GATGAAGGGGAAAAAAATACCAGTACGAAGAAAGATTTTTACGGACCAGA TATCGAATATATGGGATTTAACTCGCAAGATGATGAAAATTACGAAATTA TGAAACATTTTGAGGATGTTCACAAATTCATAGAAAACGCGAAGGCGTCA GGTGGAAAATGTTTACNAAACATTTTGAGGATGTTCACAAATTCATAGAA AACGCGAAGGCGTCAGGCGGAAAGTGTTTAATTCACTGCATGGCGGGTAT CAATAGAAGTGGTTGCCTAGCAACTGCGCATGTTATGTTAGATCAAAATA TTGGACCAATAACAGCCGCACGATTCGTTTATGAGAAAAGAGGTGTGCTG CTTTCAAATAATGGGTTTATAGAACGTTTAGTTAAATTTGCTGTCGATCG TGATTTGCTTTATTTAGATAAAGACAATATACTTCCTCTGTATGGGAACC ACTGAATATTACAACATCGTTTAAACGTAAAAGAATGGTAGTAGAATCGA GGTTATATCCAGCAATTGTATGGAAATATTTAGTTTCCTAAACCACAAAA TTCGTTGCATAGAGAAACTGTAATTGCATTAcatttggacctaccccggt ggagctgctataaatttacaaattttcagaTGCCTAAGGccaaaaaggaa atttgaattttacgaGCTAGAAAATCAGACGAATTTATTTATACCGTTGC GGACGCAGTCTAGTGAAAGGGAAACGTAAGACGGAGTCAGACTGAGTCCT GATAAAACGAATGTATAttcatgctttttttataagaatagtgtactttg gatgagggtcaagtattcttaagaaagtgccaaaattgagggtgaaatat tcttaacatatatacttgacttttttacaaacatgagaaatgatcaattt gagagttttggacttttgagtgaacatttgggttaaaattacattccttc ctcaaaactttatctctaacaaaggaagtagttttttctgttaaccaaat acaaattgactgtattcttatcaaactCTGTGAAATGCAAtgcaaaatat tcttataaagcgTGTTTACAGACATTTTGAGTTATAAATTGGTTTTAAGA ATCGTACGTTTCCTTTAATGATCAGTTTCCTTTGTGTGATTTTCCTCGAC TTCCTCTTCGTGGAAACTTGTTGCCTGAACATTTCTTACAAACTTCATAA ACGAAATGGATCTGATTGCAATTGATATCATGAACGGAACAGGCCCATCA TACACATATCATCACCATATGTGACATTGCAAATATGACATCCGAGACTG CGGTAATAGAACCAGCGCCTGAGAATACCAGTGACCATCTTCCAGTTTCC ACTTCCTTATTTCTCGAGAACACATCAGATCATCATCAACAGCAAACAAC ACCTCCGAGATGGTCTCAATTACCCAACTATCTTTGGTCCAATGAAAGAT TTCTGGAGCTCTACAAAAAAAGGTTGCTGAGGCAATGCCACTCAAATCAA GCggaaatattaacaaaaatttAGACACTCTCTCTGATCTACTTAAGACT GTGCTAGTAAAAGCTATACAGAGATAGAAAGCAATTTCCGGAAAGTCGAA CCAAAACAGTGGTGGAATCAGGATCTAACAAGGTGCAGAAATACACTCAA ACAAAACTTCAATATATGGAGAGACAATGGTTTCGAAAAGGATATGAAGA ATTCAGTGTATTATGCCCGATATGCGTTTGCCAGGAAAATATTTCGTTAT CTCATGCGCCACTACAAAAACCAAGCGACGGCCAAATACTACGTAAACAT TGATcggttaaagaaaataaacccTAGACACTACTGGAAAAAGATTATAC TTAACAAAACATCAGCAGAAAAACTATACACAATTAACAACAAAACGTCA ACAGAGGAGATCACAGAAGAATTTGGCCATCATTTCCAATCCGTTTTGAA CGAACCTAGAGTCCAACATATTGACAATGAATACGCAAACGCTCAATTAC TGTGAATCCTACAGGAACTACCATACAACTCAGAATTCCACATAACCGAG ATCGAAGTAGAGAACGCCATAAGTAGACTCAACAAAAACAAGACTATGGA CCCATACCATCTGAAAGCAGAACACTTCGTACATGCCTCGAGTAACATTT TCATAACAGAAATAACTAAAATCATCAATACTGTCTTCAAAACTAGAACA CCAGAAGCTCTAAGTGTATCAATAATAATTCCAATCTTACCGTAAATCTC TTAAGTACTGATTCTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072832TCONS_00072832Clytia hemisphaericatranscript
TCONS_00072833TCONS_00072833Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072832-proteinTCONS_00072832-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:171470..176137 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.28 7.83 6.26 5.46 0.57 0.56 2.19 2.21 2.47 2.98 2.47 2.63 3.07 2.89 4.09 4.39 4.18 4.05 2.61 2.83 3.9 3.91 5.96 4.84 4.65 4.93 3.35 2.22 3.05 3.65