XLOC_045026 (gene) - C. hemisphaerica

Overview
NameXLOC_045026
Unique NameXLOC_045026
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_8:101806..105125-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045026 ID=XLOC_045026|Name=XLOC_045026|organism=Clytia hemisphaerica|type=gene|length=3320bp|location=Sequence derived from alignment at scaffold_8:101806..105125- (Clytia hemisphaerica)
ATTAAAATAGGTTTGGTAGTTTTGAATAACTTTGCCATCAAAATATCAAT
CAAAGTAACTTTCATTGCAGATTTATCATACATCAGGTTGGTTTTAAAGA
GCTTTTGTGTGATCTGCTTGTTGGTTATTGACTTTCAAAATAGCAAAGTA
CTTTGGTTAGGTGTTGGATTAGCATCTGAGAGCGATATGCAGCTACTTGG
ATTTCTATGTTTTGGCTTGGTTCTATTTGTCTTAGTGAGCTGTAAGTATT
ATCATTTCTTTACAATTGGGGAATAAATTAACCCTATTTTACAAGGGGGC
ATCACCCTGGCACTATTTTGAAGACTCCATGAAAAACTTTCCCAAGCACA
TGAAAATTGACTTCAAACAAAATCTTATAACGTACATGCCTACCAAATCT
CTGTTCGAAGCAACCACCAGTTCGTTTGTTTTTTTTTACTTTGTTGCCAA
CATTAGTAATAAAACCCAATAACTTCAATTTTTTACATATTTCAGATTTA
ATTTAAAACTTTCAAAAAAATAATGACGTCATCTTCAGCATTCAGATTAT
AGTTCTACATACCGTTCATAAAATCAAAACAGAATTAAAACAACTCTTCT
ACATAATTTGCTTTCATTTTTTTTGAAGTACGGTTTTTCATCGGTTAGCT
GATAGGTGCTATTTAAATGATGACGTCTGTTTCGGTGACGAAAATGGACA
GTCACTGAATACGTCACTGGAATTTATCACGACTTTACAGTTTCTAGAGT
AAGAAGAACAACGTCATCAAATCATTTTTTTTTCCATAGGTGAAGAATCA
AAGACGCAAGAAAGAAATAATGTTCTCCTGAATCCGTTCCATAAAAAAGG
TAATAATTCTGGAATACAGCATATTTTTTATATCTCGGTTATACGAATTG
TAAGCCATGTTAATAGTATAAACAGAAAATTTATATGAACTAGGTAAACA
AAACAATAGCGCTTGGTTATATTAAATGCCCTTGACTTCCCACAATTTTC
AATTCTAAGAGCTAGATTTATACACCCCTGTGTCACAGATCCGCTGAGAT
CTCAGTCCCATTGGAAAATTTGTCAAAAATTTCGTCCCGGTGAGAAAATA
CCCTAGAATTTCAGCCCCACTAGGAAATTGACTTTGATTTCATCCTTAAT
CGAAATTCAATGTTTGCATATTGAAATTCAAAACCATCCCACTGGATTTT
TTAACCTTGAAACAATATAGAATTTCTATGGATTAAAAGTGGAATTTTTA
TCCCCAATGAGGAAAAAGTTCGACCGGGGCTGTGAGGCAGGGGTGTATTA
ATGACAGAGTCTCCAAAATCTTTTTGAGTATTTCTGCAAAATAATTTCCA
AAATAGTATCACGCATATTGCTTAAAATTTCATATTCTACAGATGGACCA
CCCCGGAAGCAAAACGGTTGCCTAGCAACAAGACATTGCTCCAAAGTTCT
TCAAGATTGCAAAGGTCATGGAATTTCAAAGAACTGCAGGAAGTATCGGG
ATTGTACAATCTGTTCATATGTGCGAGTGAATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATAGCGCTTGGTTATATTAAATGCCCTTGACTTCCCACAATTTTCAA
TTCTAAGAGCTAGATTTATACACCCCTGTGTCACAGATCCGCTGAGATCT
CAGTCCCATTGGAAAATTTGTCAAAAATTTCGTCCCGGTGAGAAAATACC
CTAGAATTTCAGCCCCACTAGGAAATTGACTTTGATTTCATCCTTAATCG
AAATTCAATGTTTGCATATTGAAATTCAAAACCATCCCACTGGATTTTTT
AACCTTGAAACAATATAGAATTTCTATGGATTAAAAGTGGAATTTTTATC
CCCAATGAGGAAAAAGTTCGACCGGGGCTGTGAGGCAGGGGTGTATTAAT
GACAGAGTCTCCAAAATCTTTTTGAGTATTTCTGCAAAATAATTTCCAAA
ATAGTATCACGCATATTGCTTAAAATTTCATATTCTACAGATGGACCACC
CCGGAAGCAAAACGGTTGCCTAGCAACAAGACATTGCTCCAAAGTTCTTC
AAGATTGCAAAGGTCATGGAATTTCAAAGAACTGCAGGAAGTATCGGGAT
TGTACAATCTGTTCATATGTACGAGTGAATAAATGGCATTGCAAGAAAGC
TGTTTGTGAAAAACAACGAAGATATTTGAATAAGAAATAGATTATTATAT
TTTATAGCTCAGTATATATCTCTATTTTGTAAATATACTAATTGATCCGG
CCTTAAACCTTTAAGAGTAGCTACAGTAATGAAAAGGGCGAAACGGTAGG
GGAAAAACAACCTGGCCTTCCTAAATCAGACGGCCCGAAGGCACCTAAAA
GAAAGAGGAGAGCTTTTTAATCCAACGAGCTATGAACCATCTTTTACTCT
TTCTAAATCACAGAACGAAGGCTTTAAAATTAAAAAGTTACAGCCGATAA
AGGCCTACTGCCTTTGAAATTTCTGCTCTCGAGTTTTGAAAAATAAACAA
CAAAGTTAGCAGTTGTAAAATAGCATGACCAGCAAAACCCTTTCAAGAAC
TCTCCTTAGGCTCACAGCTTATTCCTTAAATAGTGATTAAGTTTTGGATT
ATAGCGAACTCTATATCATCTACTCACACTTCCTTTTTCTTCATGAATTT
ATCGTGTTAGGAAATCTACTTTCCAAACTTGAAGTATTTTCAAATTCTTA
TCAAAACCCCAAATTGACTTAACCTAAGCTAAGTGTCCCAAACGGAAAAT
CTATAATCTATTTGATATCAATAGGGGTTTGGTTGCAAGCCTTCTCCCAT
TTGTTCAGGTTAATGACATTTATTCATCTATTTACTTAACTTGAAAATTT
GTTAGATTATTGGATATTATTTAATCAAACTTAAGAACAGCTTTTCAAAT
TCTGAAATTTTGTCTTTGACTATTAACAAAAATCCGTTTTTGGGATTTGC
TTTCAAAACTTCTTACCTGAAAGAAATTGTCAGATGGGTCAATCGGTCAA
TCGCGTCAATCGTGACCAAGAAGCAGTCCACAAGGCGCCTACTGGTAGTA
CTTTGTTACCGAAAGCACTGAGAAGTAATACATCTCATGCAGTATCAAGT
CAATTGAAGACATTCTGGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072556TCONS_00072556Clytia hemisphaericatranscript
TCONS_00072555TCONS_00072555Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072555-proteinTCONS_00072555-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:101806..105125 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.65	0.17	7.64	6.96	9.6	3.18	5.53	8.34	50.5	48.34	43.94	48.81	2.53	3.09	14.85	9.82	0.03	0.04	0	0.17	0	0.15	0	0.04	0	0