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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072556 ID=TCONS_00072556|Name=TCONS_00072556|organism=Clytia hemisphaerica|type=transcript|length=430bp
ATTAAAATAGGTTTGGTAGTTTTGAATAACTTTGCCATCAAAATATCAAT
CAAAGTAACTTTCATTGCAGATTTATCATACATCAGGTTGGTTTTAAAGA
GCTTTTGTGTGATCTGCTTGTTGGTTATTGACTTTCAAAATAGCAAAGTA
CTTTGGTTAGGTGTTGGATTAGCATCTGAGAGCGATATGCAGCTACTTGG
ATTTCTATGTTTTGGCTTGGTTCTATTTGTCTTAGTGAGCTGTGAAGAAT
CAAAGACGCAAGAAAGAAATAATGTTCTCCTGAATCCGTTCCATAAAAAA
GATGGACCACCCCGGAAGCAAAACGGTTGCCTAGCAACAAGACATTGCTC
CAAAGTTCTTCAAGATTGCAAAGGTCATGgaatttcaaagaactgcaggA
AGTATCGGGATTGTACAATCTGTTCATATG Run BLAST on NCBI transcript from alignment at scaffold_8:103605..105125- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072556 ID=TCONS_00072556|Name=TCONS_00072556|organism=Clytia hemisphaerica|type=transcript|length=1521bp|location=Sequence derived from alignment at scaffold_8:103605..105125- (Clytia hemisphaerica)
ATTAAAATAGGTTTGGTAGTTTTGAATAACTTTGCCATCAAAATATCAAT
CAAAGTAACTTTCATTGCAGATTTATCATACATCAGGTTGGTTTTAAAGA
GCTTTTGTGTGATCTGCTTGTTGGTTATTGACTTTCAAAATAGCAAAGTA
CTTTGGTTAGGTGTTGGATTAGCATCTGAGAGCGATATGCAGCTACTTGG
ATTTCTATGTTTTGGCTTGGTTCTATTTGTCTTAGTGAGCTGTAAGTATT
ATCATTTCTTTACAATTGGGGAATAAATTAACCCTATTTTACAAGGGGGC
ATCACCCTGGCACTATTTTGAAGACTCCATGAAAAACTTTCCCAAGCACA
TGAAAATTGACTTCAAACAAAATCTTATAACGTACATGCCTACCAAATCT
CTGTTCGAAGCAACCACCAGTTCGTTTGTTTTTTTTTACTTTGTTGCCAA
CATTAGTAATAAAACCCAATAACTTCAATTTTTTACATATTTCAGATTTA
ATTTAAAACTTTCAAAAAAATAATGACGTCATCTTCAGCATTCAGATTAT
AGTTCTACATACCGTTCATAAAATCAAAACAGAATTAAAACAACTCTTCT
ACATAATTTGCTTTCATTTTTTTTGAAGTACGGTTTTTCATCGGTTAGCT
GATAGGTGCTATTTAAATGATGACGTCTGTTTCGGTGACGAAAATGGACA
GTCACTGAATACGTCACTGGAATTTATCACGACTTTACAGTTTCTAGAGT
AAGAAGAACAACGTCATCAAATCATTTTTTTTTCCATAGGTGAAGAATCA
AAGACGCAAGAAAGAAATAATGTTCTCCTGAATCCGTTCCATAAAAAAGG
TAATAATTCTGGAATACAGCATATTTTTTATATCTCGGTTATACGAATTG
TAAGCCATGTTAATAGTATAAACAGAAAATTTATATGAACTAGGTAAACA
AAACAATAGCGCTTGGTTATATTAAATGCCCTTGACTTCCCACAATTTTC
AATTCTAAGAGCTAGATTTATACACCCCTGTGTCACAGATCCGCTGAGAT
CTCAGTCCCATTGGAAAATTTGTCAAAAATTTCGTCCCGGTGAGAAAATA
CCCTAGAATTTCAGCCCCACTAGGAAATTGACTTTGATTTCATCCTTAAT
CGAAATTCAATGTTTGCATATTGAAATTCAAAACCATCCCACTGGATTTT
TTAACCTTGAAACAATATAGAATTTCTATGGATTAAAAGTGGAATTTTTA
TCCCCAATGAGGAAAAAGTTCGACCGGGGCTGTGAGGCAGGGGTGTATTA
ATGACAGAGTCTCCAAAATCTTTTTGAGTATTTCTGCAAAATAATTTCCA
AAATAGTATCACGCATATTGCTTAAAATTTCATATTCTACAGATGGACCA
CCCCGGAAGCAAAACGGTTGCCTAGCAACAAGACATTGCTCCAAAGTTCT
TCAAGATTGCAAAGGTCATGGAATTTCAAAGAACTGCAGGAAGTATCGGG
ATTGTACAATCTGTTCATATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072556-exon-scaffold_8-1575043694:104885..105125 | TCONS_00072556-exon-scaffold_8-1575043694:104885..105125 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1575043694:104277..104336 | TCONS_00072556-exon-scaffold_8-1575043694:104277..104336 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1575043694:103605..103733 | TCONS_00072556-exon-scaffold_8-1575043694:103605..103733 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1510915933:104885..105125 | TCONS_00072556-exon-scaffold_8-1510915933:104885..105125 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1510915933:104277..104336 | TCONS_00072556-exon-scaffold_8-1510915933:104277..104336 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1510915933:103605..103733 | TCONS_00072556-exon-scaffold_8-1510915933:103605..103733 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1491911889:104885..105125 | TCONS_00072556-exon-scaffold_8-1491911889:104885..105125 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1491911889:104277..104336 | TCONS_00072556-exon-scaffold_8-1491911889:104277..104336 | Clytia hemisphaerica | exon |
| TCONS_00072556-exon-scaffold_8-1491911889:103605..103733 | TCONS_00072556-exon-scaffold_8-1491911889:103605..103733 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:103605..105125 - |
Blast
The following BLAST results are available for this feature:
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