XLOC_044994 (gene) - C. hemisphaerica

Overview
NameXLOC_044994
Unique NameXLOC_044994
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_78:295315..301678-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044994 ID=XLOC_044994|Name=XLOC_044994|organism=Clytia hemisphaerica|type=gene|length=6364bp|location=Sequence derived from alignment at scaffold_78:295315..301678- (Clytia hemisphaerica)
CGATGCTAGACTATCACGCCTCATTTACACACACGGTGTGGCGTTGACCC ACCCGCCCACAAAACTCGGCTGCCGGCATCCGATGGTCTTTTTAATGGCC GACTTGCTCTAAAGCTGACTGCAAGTGAACTCTAAGTAAGTTGGCCAATC TTATCCTCTATTATCTGAATATATATTTACCTAAATCTCGTTTTGATCAA CCTAGTATCAATGCGATCTGTTATTTAAACGTATTTCCTATTTATTTTTT TCAGAATGGCTCCTCGAAAAGGGAAGGTACAGAAAGAAGTAGAGGTCGTC TCACTCGGTCCTCAGGTAAATGTAATAGCCCTGTATTTCTATGCTCGGCA TATTCTTACTCGTGTAAGACAATCACTCAGCTTCGATGATCTTCTTTACT TTTACAGGTTGCTGAAGGTGAAAATGTCTTTGGTGTTGCCCACATTTTTG CATCATTCAATGACACATTTGTTCACATCACTGATTTATCTGGAAAGTAA GTTCATTACACCTTTCACCGCGTATATTATTTTTTCAGACAGTTTTGTGT TATAGTTTGAACAATCTATATTGGTTGCTTGAAAAGGTTTATTGTGGAAC TTATTTGTGGAGGTAACGAAAACGACGATGGTCGATGGGTTCGATATATA ATCATATTATAATCATGGATATGAAATGATGAATCTCTTGATGTCTCCTG GTATGTTACATGGTATTGATATTTATTGTATACTGTTATATTGGATTTGA ATGCTAATACATACGTTTCTTGGAAACTTGTATTGATTTGGTTGCATAAA ATCTCCATATATTGAATAAAAACAGTGTACTGGATTTTTTGAAAAATATC AAGTTTAGATTGGAACCTGATTTTATCCACATCATTGAAAGCTGGGCTTG TGTTTATTTGGGATTTGTAATTTCTATATTTCGAGACAATAAACAATTTG TTTGGAATGGTTTGCTAGTTTATTTACTTTTCATGATGGACCATGACATA GGCGGTGGTTACACGTAGCCGTGGTGAAATTCGTGAAAACCCTTTTTCTC AATCCGGGGTGAAAATTTTAAATCACCCCGGCGTGAAAACCTAATAATGC ATAACTTTTAGATTTTATCAGTACACAACATCAAGTAGTGTTGAAAAACT CTTTCGTCTCTCACACGCGAGCAGGAAAGATAGCTCCTCTTGATAGAAAA AGCTTATTGATGTTAATTTCTAGTATCACTACAATATTATCGCTTAGCCT TCTGCCAATGCAAATTCATTCAGTTTTAATTGTAAAACTGTTGGCCCAAA AACGAGAGTTTGAGAGATTGCAGATGGAGGCTATTCTTTCAAACAACATT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNACAACTTTCAGGATTGCAAAATAAAACAAAAACAGACGCACA TTTTTTTTTCAACCCGGGGTGAAAAAGAAATTGTGTATACATGTAAAAAT CTGCAAAAATTTGCCAAAAAAATCCTCAAAAAAATTTTCACTCCGGTCCT CAGGACCGGGGTGAAATCAACCCCGGGGTGAGTTCAACCCGCCTAAAAAC GATTTGACCCCGCCTAAATACGTGTATACAGAAACAGTGTTTTCTTTATA GACCGTAGTGAATTTCACCCCAGGGTGAAATCTTTTTTTATTTCACCCCG GCTACGTGTGACCACTGCCTTAGATAACTAAAAGCACTGGATGTAAAATA TCTGATGTTGTATGTGAGAACTTTTCACCTCAGGACAATCCAAATACTGA AAGTAAACAGTGAAGTCAGGTAATTTGCACAGCCATCGATCAAAACAGCA AAATGAAAAAGCATGAACTATGTAGCCCCGCTCGCAGTTCTACTCTAACT ATTTTTATTATGATTTAATTTGTATTTTAATGACCAGACGGGTCATTCAT TGAGGGCTATGCATCTTTGCCTCCACTGGTGCAAGTTACCGGATCTCACA GTGTTGTGTACAAGTATTATTGGGCTGTGGTCTTAAATAACTTGCATTTG CACTGGTTTAGATCATTTTTCGGGTCCCAACAGTGAGTCGGTCCGTTCGC AATTGGAATTCGTAGCTCAGAAATGGGTCACTACACCCCTCCACTCTCCA CACTAGGTTCTACCCCCTCACTAAATTTGATGGAACCGCCCTCTAGTTGC AATGGCCCTTCTAAAAAATGGTGAAAATAGAATGTAAGTAAGGCGGTTAT CAAAAAAATGCTCTGTTGGCATTGCAACGGGTGTTAGAAATGCATGCGGG CGGTCAAAAACATTCCCGGGTTTTTTAATCATGCCAGTAACTCGGGGGCG GGTGGTAACGCGAGAAAAACAATTTTTCGATGGTCTTCAGAGCAATTGAG AAAAAAGCTATACTTTAAAAGAACAAATTGCTTTTCCCAGATTTTTTTCC GCATCTCCGCACCGGAAAATCAGCTGACAATTTGATGCGGGCAGGTGACG CGAATAGAACAATTTTTCGATGACCGCCTCAGAACATTTTTAGGTGAAAA AAAGGGTAAGGTTTTCAAAAATCACATTCGCTAATTTTAGTTCTTTCACT TTTTAGCTTATTTAGCATGGGAATGTCCCAATAAAGTTTCCATTTCTGCC AAAATGGATTTTCTTTTCATTTGAAATAATAATTCATAAATGAAATGATA TGAAATCTAAATAGCATTTCTGCTATTTTTCTCACAGCGACAGCCCCCCT GCAAATTTTTCCCATAAAAGGAAGAGACTGGATGTAGACCACTTTTTTTG GGGAGCTAAAATCTCATCACTTAACGTGGGGGCTAAAATAATTCAGCTTA ATAGTTGAAACTGAGACTGAAAAATTTTTGTCTGCGGCACAATATTTTTA CAAAAAGTGTTCAAAATATTTGAAACTAACTTAAACCATAGAGGTATAAA GAAAAACAGGAGTTGAATGTGTCGGTAATTGGTCGTTAAAGTCTTTTGAT TTCTTTTATAAAATGTATCAAAAGAAATTCTAAGCTCGCCCGATGAAATA AGACTTTTTAGTAGAACTCAAGTTTGCTATGAACATTCTAATAATCAGTA TTGAAGATTATGGCCTTTTAATATACGAAAATTAGATAAAAATTCGTCCA CGAAGCAAGTTTATGTTCCATTTCGCTATCCGTTCAATTTTGTTTTGAAA AGATATTTTCTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTATATGAGATTATGAGCATGCATACATCGTAACTTTTTTAATCGTA GGGCGAGCTTGGTTACAATAGCATACTTCTCCTGTTTCTTTATACCTCCA TGCTTAAACATAGAACTGGATGCAATTTACATTGAAAAACCCTTTTACTT GGATTGATATTTTGAAAGTGTCTTCTAGGGTCGAAAGTCTTCAGGGGTAA CAAAAAATTCATAAATCTTTGGGGGGACTTAAAACTCAGAGGGAACCTAA TCTTTGCCTGGGACCTAAACCCAGGCTGACAATATGTTTTCTCATACCAG CATGAGATTGGAAAGGCTTCGTTCTAGAGTTATACAAAAAATATTGTGCT TAATTATAAAACTGTAACTTTCTGAAGGACAGTTTTCAACAACTTCCAGA AAGTGGCAGTGAAATCTTAGCATGGGAATCTTATGCAAAACAATGGTAGT TAGGAAATTTCAAAGCATAAATGTCCTGGATTAAGATAGTTTTGCTTCTG TTATGCTATACAACTTTGAAATTTCAATTTTTCTCGAGAAGAGCTATGTT AATTTGGTAGTCTTTTCCTCATTTGGAAAGATTTCTTTCCTAATTGCAAA AATTCCTGACCAAGCAGAACTGCAAAAGTTTGACTACACTAAATTTACAT GTTGAAATCAAAAGAAATATATTAGTCTGTGTTGCTATCTGGTTTGGTCT GCTCCCGTTTTGAGAAGCTCTGCAACTTTACAATTCATAACCTGTACTGG AATTTATAAAATTCTCAAATGGTACAAGTTTTAATTCTGATCAATATTTT TTCACAGGGAAACCATCTCCCGAATCACTGGAGGAATGAAAGTTAAGGCT GACAGAGATGAATCTTCTCCCTATGCCGCTATGTTGGCTGCCCAAGATGT TGCTGTTCGATGCAAGGAAATTGGTATCACTGCCTTACACGTCAAATTGA GAGCCACTGGTGGTAACAGAACCAAAACACCTGGACCTGGTGCTCAATCT GCATTAAGGGCTTTGGCTCGTTCTGGAATGAAAATTGGTCGTATTGGTAT GTATTATTTACTCCAAAAGTCCTGACGCTTCATGTACGGTTCAAATGCCC AAGTTAAAATTTATTCCTCCATCCTTCATAATCTCTATTGCTTCAGACTT AAATTTGATTTCATGCATTTTGGGCTTTTGTTACTGATTTTTTGGGGAAA ATATTGCTCTGATTTTCTGAAAATGAATTTTTTGAAAACTACCTTGATTT CATGCATTTTGCAAAAAGAGGCCAACCAAATTCAGATTGCATTTTGATTA AGTTAAATAATTTACGTATTGAAATTCCAAATCCTTGCTTCTTTTTTGGG GGGGGGTGGGGCTTTCTGGAAAGCTGAAAATATCTTCTTAAAAAGCTTTT TATGGAATTTAGGTAAAAATGAAATATGCCATGTTGTAGAAAAAAACCCT GACCTTAACTGCGTTAAAGATAGGGCCTAAGGAATGGTGTTCCTAACTTT GGTAGTGAACAACCAAAATAGATTTTTCTTAATTTGCTCTTAATAAACTT TTCATTCATTCATTTTCAGAGGATGTCACACCAATCCCATCCGATTGCAC AAGAAGGAAGGGAGGTCGTCGTGGAAGACGTCTGTAAATCTACCTTTTCC AGTAAATAAATTGTACCAAAATCCCAAATCTTCGCCTTTGTTCATACCAT TCTATGTTTAATATTCCATTTATAGACCATGGCCAGGGGATTGCTAAAGT TTCGAAAATCTGGTAGAAAAATTCAAAATGTCGGTGAAAAGGCTTTAACC CTTGATTTTAGTCAATTTGAGGGTGCTGATAGACCTTTTCATAAATTACG TCACGAACATCACTTGCCTCGTATTCAAAAAATGACCATGGTGATTATAT CTTGTAACATCAAAGATTTATTATACACTGGATAAACGACTCATAAAACG ATGGAGAGCGATCATTGTATTTCCTTTGTTTCAGAAAACAATTGATGTTC TAGCTTTGTCCGCAAAGGACAACTGTCATGGCGGCTCGAAGATGTCTGAT TTTAAAAATGTTTATCTGTCTTATTTTTAAAAAGTTCTCTAGCTCTTTCT TTTTGAACATTTGCCGAAAAAAGAGTTTGAAAGTAAGGCTAGTATTCCAA GCCAGATACATTTGTGAAATCTAATGTGAGAAAAACATCTTTAGACAAGA AATCCAGCCAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072512TCONS_00072512Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072512-proteinTCONS_00072512-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_78supercontigscaffold_78:295315..301678 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RPS1440S ribosomal protein S14 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
925.35 916.5 936.03 973.29 544.9 446.84 660.84 731.39 1160.39 1183.9 1372.92 1530.36 1871.25 1933.68 1596.44 1718.77 1831.47 1938.81 919.41 1061.75 1737.73 1780.19 1297.19 1216.57 1080.55 1141.34 1607.33 1703.57 1084.65 1111.71