XLOC_044964 (gene) - C. hemisphaerica

Overview
NameXLOC_044964
Unique NameXLOC_044964
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:529960..536817-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044964 ID=XLOC_044964|Name=XLOC_044964|organism=Clytia hemisphaerica|type=gene|length=6858bp|location=Sequence derived from alignment at scaffold_77:529960..536817- (Clytia hemisphaerica)
AAAACCTCCGTTTTTATGATTACCAAATTTTGCACTCGTTACTTTGGGTA ATTTTTACATAAATACACCGGATTGGCCTGAGGAAAGTATCATCACTTGA CCAGCCAAGGATTTCTTGTAGTTGACACATCATGATGAAGATTTTGTTAC TTTTGGTAGTCTTTTCAGGCGTTGTTTTCTCCGAATGGATCAAAGAAATG GAGAGTAAGTATCCCGGCTAGGACATACCTTATCGGGGAAAACTTCGTCG GGGAAAAGTGACGAAATTTCGGCCAATTGACGAATATTTTTCCCCGACGA AAATTTTCCCCGGCCTTAATGCGTTTACCAAAACCAGCAAGTGACGAATA TTTTTCCCCGACGAAAATTTTCCCCGGCCTTAATGCGTTTACCAAAACCA GCAAGTGACGAATATTTTTCCCCGACGAAAATTTTCCCCGACGAAAATTT TCCCCGACGAAGTTTTCCCCGATAAGGTAATGAAGTTTCAGCGTTCCATA ACTAACATTGGTCCCCTCAACTGGGAAGTGGTTTGGATTACTTTCTTTAC TTTTTACTTTTAATTCGTTTTCTGTCCCTTGAAAAACGAATTAGTGGGTG TCAACTTTCTACCGTCGTTTTGTATAAGATTCCTATTTACGCACTAAGAT TCCTTTGCCACTTTTCTAGCGGAAAAAAGTTGAAAAAAGTTAAAAAAAAC TTTGAAAAATTAGACAGTTTCGTGAGTAAACACAAGATTTTCCGTACCTT TAGAAACAAACTGATGGAGCTTCTTACCAATAATGGGGATGAAAATTTTA TTAAGTCCCAACTAGAAAAGAAAATATTCTTCCAAGCTTAAAAAATCAAG TGGGATGTTTTTTGAGTGCAGTTTTCTCCATTGTATTTAAAAAAACATCA AATGAGACGAAGTTTAACATTTCTTGATATAACTCTAAACTGAGTGCACC GGTGATGTTCTCATTAGATGTTCTACATTGCTAAGATCACGAATTTATGA GCTTTGCTCACTGTTTTCAATTCTGATAGCACTCACGGTTCTATCACGTC CGCAAAATAAAAAAAGTGACCTTAAATGGTTCCGGGATATGCCATTATAC ATTTCTATATCAAATTTCTTTTTCTTTTAACAGACCAAGAACTTTTCCAA GGAGACATTGTTTTGGACCCTGATGAAGATGAACGTGGGTTGAACAAAAA CACTTTCGCCAGCATCAAAGGTGGACGTTGGCCAAACGCAAGAATCCCTT ATGTCATTGACGGAAGCATCAGCTCAAGAGGTACGTGACGTGTACGTGAT GCTAAAAAAATGTCATGTAAGATTACGTGTTTTAAGATTGATTGTCAGAT GACATTTCCATAAACGTTGAAACAAGGTTTTTCCTCTTGAAAATCGTGTT CGCGGCCTTGACGAAATCCGTTTTGATTAGGACGGAGGACCTTATCGATA ACAGGACGAATTTGGTTTAGGATACAATGGTTGTAGACTTTAGCTGCTAT TTGAGATAGTGCAATGCCTCGCGTACATGTAACTCCCTGCGTATTATGAG CCCCCACCCCAAGCAGTTTTCGTGATGGCGTGATAGGGACCTTTTTCTAT TGTGATTACGTGATTTGGAAATATTTTCTTTGTGATTGCGTGATTAGATT TTTGAGCCATGATACGTGGATTCGGACTTTTTCAAAGGGATGCGTACTTA TTCATTTTTTTTTGCTGATTTTTGTGATCGTGATTGAAGACAAATCGCGT GATATCATGATTAGACTTACCGCTGGAGGCCTCTAATATCAGATTTTTTA TGTTTACTGAAAAGCCTCAAATGATATCTTTAGCACCCATCAGTGATATA ACAAACGCAATGAAATACATGGGGACGAGGTTGTTTCAAGCTTAAAAACA AAGATTTACTGAGACTGAGGATTGGCCCCGTGAATCTGCTTGGATAATGT TAAACAAATTATCTGATTGATGAATTTCGTTTTATATACAGGTCGATCGG CCATTTCCGCTGCGATTAGTGATTACCACAGTTACACCTGTATCCGATTT CACCGAAGAACAAACGAACGAAGTTACATCAAATTCTACAAAGGACGAGG GTATGTTAGTTTAGAGTGTTTATCACACAACGTTGTTTTAACGTTTATCT AACGTTCACAACGTCCATATAACGTTCACAACGTCCATATAACGTTAAAT GAACGTTGAAACAACGTTGTGTGCCAGCTGGGTACAAAGTCTACTTTAGA TGTAGTTAGCTGAAAAAAGTAGTTTCTGAAGAATTTTTTAACGATTTTAC ATCAAATTCTACCGTGGAAACATTAGAATGTTAATCACTTTAGTGGCTAT CCTACTCTAGCGGTACTTGGTTAAGTTATATAGGTTTTAAACAATTTTAT AAGTTCTACAAGATTTAGATTCCCGGAAAGAGTCGAAAGACTTGTACAGC GAAAATTGAATCAAATTACACCGTTCCCATAAAAATGTTAATCTGAAAAC TACATTAAACGTATCAAAAAAGTTAATCGATTACAGTTGGCGCTCTCTAA ATCGATGTTTTACGATTCAATCCACTCCGTTATTCGATAATATTGAAAAT TACTGTCAACAAGAAACTCTCTAATTCGAGAGTAATTCATTACGCTATCT TATTCAATGAAAATCCAATTCTTTTGTATCCCTAAACTCGATCCAATCCT TTTGAGACACATTTTCAATTGTCTATAGATGCGAAAAAAGGACTGGGACG GTTTTAGTGGCAGACANCCTAAACTCGAGACACATTTTCAATTGTCTATA GATGCGAAAAAAGGACTGAGACGGTTTTAGTGGCATAAAGCGGACCAAAA AATGCTCGCGTGGCAATTGGCGGCTACGGTCGTTATAAATTGTTATAAAT TTGAATTATTCAACCAATCTTGTATTTTAGATGTTCATCACCAGTTGGAT ACAGATATGGACGTGTCAACTCCGTTTCTTTGGCTTCTGGATGTTGGACG AAAGGTGTTGTCATTCACGAANAGTTAATCGATTACAGTTGGCGCTCTCT TAGTCAATGTTTTACGATTCAATCTACTCCGTTATTCGATAATATTGAAA ATTACTGTCAACAAGAAACTCTCTAATTCGAGAGTAAACGCTATCTTATT CAATGAAAATCCTCCAATTCTTTTGTATCCCTAAACTCGAGACACATTTT CAATTGTCTATAGATGCGAAAAAAGGACTGAGACGGTTTTAGTGGCATAA AGCGGACCAAAAAATGCTCGCGTGGCAATTGGCGGCTACGGTCGTTATAA ATTGTTATAAATTTGAATTATTCAACCAATCTTGTATTTTAGATGTTCAT CACCAGTTGGATACAGATATGGACGTGTCAACTCCGTTTCTTTGGCTTCT GGATGTTGGACGAAAGGTGTCGTCATTCACGAGATCGGACACTCAATTGG TAAGTAATGTCATTTTCAACCAATCAGATTTAATTTTCAAGTTTTCCAGC CAATCACATTTAAGATTCAAAATTTTACAACCAATCAGATTTGATTTCCA AGTTTATCAACCAATCACAGTCAAGATTCGAAATTTTTTTAATGAATTAA ATTTAAGTTCAAACCTTTTTAACAAAACATTAGCCAAATGTTTAAACCAG CCAAACCTCCCTACAAGTCTAAGCCAATGAAATTACAATAGCCACCTATT TAAACCGTTAAACCAATCAGATTCAAGATACAAGATTTTTTCAACCAACC ACATTTAAGAATCAAAATTTCCAACCAATCAAATTTGAGATTCAAAATTT TCAATCAATCACATTTTAGATTCAAAATTTTCAACCAATCCACATTTAAG ATTCAAAAATTTTAACCAATCAGATTTGATCTCCAAGATTTTTTAACCGA TCAAATCTTTTTTAGGTCTTTACCACGAACAATCACGACCAGATCGTGAT AACCACGTTAGAATCCAAACACAAAACATCATCTCTGGCATGGCTTACAA CTTCAACAAACAACGATCATCAAATATCGACTCCAAAGGTTTGTACACGT TTTTTTTTACAAGAACAAACTATATCAGAACNAACAAACAACGATCATCA AATATCGACTCCAAAGGTTTGTACACGTTTTTTTTTATAAGAACAAACTA TATCAGAACATCATCAGGCTTCGACGGCCAAAATTTTAAGAACAAGTTAA GAACATTTAAAAGCTTTGCGAACCATAGAACACATGAATTTCTTCTAAGA TAATTACTCATAAAATGGTGAAATTAGGACATTTTAAGAAAATTTTTAGG CTTAAAACTCGAAAAATTAAGAACATCCAACAGACTCAAAAATTTTGGAT GTTCTTATAAATAAACATAAATCAAAGTTAAATCATCAAAGAAGGTCAAA CAAAGGCATCCTTAAGGGCGGAACATGAACCCGCACCCTAAATTTTACTG AACACAAACCCCGGTCATAGAATGCCAAAAATGCTGAAAGTCATTTTACA ATAAAAGCACTTCATATTGGAAGTCTATCGTGGCTTGGATCACGAGATTT ACGTTTGGCTAGATTTCGAGAGATTCTTCTCTCTTCATCGGGTAAGGTGG GGGATGTTTTCTTCACTATTTGTACTAAAACCGTCCTTACAAGGCCCCCC CCCTTGTAAGGAACGTTTTAGTACAAATAGTGAAGAAAACATGCAGGGGT TCGAAATATCATTTTCCCGATAATATTTTTGCTGAATCCCAGAATCCCTA AAATTGAAAAAAAATAATAACACTGTCACACCAGTTTGTAGGGGTTAAAA TACCCGGCATAATGACTCAAAAAATAAGGCTAAATACCGTCACCGTCTGA TTTTAAAATACCGTTTTTTCGTCACTTTTTTCGTCAAATTCCGTAACACC GTAATAAAAAAGGGCTAATCCCGTCACGATGTAAAAGTATAAGGTGTGAA TCTCCTTGTTATCAAAGGTAAACCATTACTTTCTTCTTCGTTATAGGAAC TCCATACGATTTTGATTCCATCATGCATTATGGACCATATGCTTTCGCAA GAAGTCGTGGTTTAATCACTATCAAAACTTTAGATCCAAAGTATGTATTC TCCGATTTGAACAAGAAACTCGATTTTAGAATGGGCTCTTCTAGCAGAAA ATGTCATGGGGGTAGAGGATATAGTGTCCGGGGTAATGAAAAATCTACAA AATTTGCCCCGTCCGGGGGGTAAACTTGCTCTGTTTGGGGGTAATTTTGT TCGGTTTGAGGGTTATTTTGAATGTCCAGGGTGTCAACTGATGTATGTCC AGGTGGTCAGACCTGCTATCTGGGGGGTCAAAAGTCACAAAATGTCCGGA GGGTAAATTTCTAAAACATGACATACCCTCCACCCCCTATATTCAATTTT TCTCTGGAAAAGCCTAATTTTGGAAACCTTATCAGTCCTTTATACGCCGA GCCTTATAGGCGTTATTTTTTCGTCGCTGCCGTAATAAGTGCAAGAGACC GGAAATAAATTGGCCCTAAATTGGGGCCAGGCTGAGATTGGAAAAAAAAT CCTAAAATCTTTTGAAAATTAATAACTAGATAGGAGGACTTTTGAGTAGA ATATCTTAACTTTTATTTATTTTGTAATTTTAAGCTACCAAAATCGTATC GGCAACAGAGGTGGATTCAGTACTATCGATAAGCGACAAATCAACTTAAT GTATTGTGGCGGTTCAGGCGGCAATGGCGGTAACGGTGGAAATGGTGGAA ACGGAGGCGGTTCTGGATGTAAGTAACCAATCACATTATTTGTTTCAATC TTTTCGAATAATCAGATTGTATATTCCAAATTTTGAACCAGTTAGATTAC ACGTTTCCAAATTTTTGACCAATCACATTGTTTGTTTCAATATTTTGACC AATCAGATTGCACGTTTCTAAATGTTTGACCAATCACGTTGCTAAGAATC TACAGACTAGGTGTCTGCTTTAAGCTTTTCCTAGCATAAAAAGTGATTAT CGCAAAAAAGTTGTTCTTGCTATTGTTTTTGAAAATCCGGGAAGGGCTGA AATTCTATTATTTAATGTCACGTGACCTAGGTAAGATTTCACGGTACACC TTTCGTCAAAGCAAACCACCAACTAGGCCTTCAGGCTTTTACACCAATCT GTGATCTATGATATCTTTTTCGAAAGAATGGATTTTAGTACTAAGTGACT AATAAAAAATATCGAACACGAAAATTTTGTTCAAAAATAAATGATTAAAC ATATTTTAGGTTAACCCTTTCCGTGCCCATGTCAAGTGTATTTGAAGCGA AGCCCTCCTGTAATGCTCAGTTTGAGTTAGAAAACGCCATTTTTGGTCTA ACTCGTAGTAATCGGATTGGGCTTCATGTAAAGCAAAAAAAAAATTCAAA AGTGAGTCTTTCCAGCGAGATTTTAAGCTAAAAAGCCTAAAAAATGCTAA AATGTGACAAAAATCCACAACAGTTTTGCTCAAAAATAAAATAACTACAA CATAGAANTGACAAAAATCCACAAAAGTTTTGCTCAAAAATAAATTATAA ACATTAAATAACTACAACATACTGAGCTAAACTTTCTGACTTCTTTTTTT AACAGCATGTTCTGATAAAGTCACTGATTGTCAAAAAAACATCCAAGGTT GTCGAAGCTGGGGTCAAGCTTGGATTGACTACATGAAGAAACATTGCCAA AAATCTTGCGGATTCTGTCGCTAAATAATGGCGCCCGATGCATATTATGA AAACATTGTATGTTATACATAATAGCATAATATGAGAATGTAATATGGTA TTATTTACATTAAATCATTAATTATTAAGAGATTTACGAGAATATACAGA AAGAAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072452TCONS_00072452Clytia hemisphaericatranscript
TCONS_00072451TCONS_00072451Clytia hemisphaericatranscript
TCONS_00072450TCONS_00072450Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072452-proteinTCONS_00072452-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:529960..536817 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.2 0.12 0.15 0.56 0.03 0.04 0.11 0.39 419.81 467.28 99.01 247.52 83.83 93.73 3783.32 4131.44 528.11 530.58 669.03 601.48 793.61 680.01 0 0.05 0.13 0.38