XLOC_044938 (gene) - C. hemisphaerica

Overview
NameXLOC_044938
Unique NameXLOC_044938
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:339802..344735+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044938 ID=XLOC_044938|Name=XLOC_044938|organism=Clytia hemisphaerica|type=gene|length=4934bp|location=Sequence derived from alignment at scaffold_77:339802..344735+ (Clytia hemisphaerica)
aaggtttgaaTAACTAAGAATAATTAATAACTTTCTTCcattttcacatt cattttgtttatcaggtgaaataaaaaataaacgtagtagatcataaaat aaaaatgtacaatCAAAGTGCAGTGTCAATAAAGTCCAGTGCTTCACTGC TGTACAATAATCTAGATGTCCTTTCATCTGCATCTGGTCTTCAGTATGCA GTTGTTCACAAATCCAACGTTTGGGTGTTTGATGCAGAAGAAATACAGAC CAACCAAGCTGCATACAGAAGGGTTGTTTGTAAAGGAGAAGGCACACAAA CAAGCTCCACCATCATGCAGGTCAGCAAATTACACAAATGATATAAAAAT CATGCTTTAATTGATAGATACAGAATGTCTTAGATGGACTTATGATCATA TTATAAGATCTTTTAAAAGTTCGACGTCCCATTTTTTTTTCAGGCCAAAT GGTGTGTTTTACCACAGAGGACTCTTCTTGTTGTTGGTTCAGTCAAAGGT GCACAGGTACTTTCCCTTTGTCCATTTCACATCCTCCTATGTCTCTGTGT TCATTAGATACCTTTTTGATTATCTTTCTAACATTGAGGGCAATGTTATA AACTATATTGGCTATCTTAGACAGCTGGAATATCAAGGGAAAAATCTTAA TTTAGTAATAAAATGGTATTTGGTATTGATATTTTTCCTCTGTTCCCCTA TTAGTTGATATATAACGTAGCCTCATTTTCTTTAGATGTTTGATGAGAAT GGGTCAATGATGATTTTCTGGCAAGCCTTACAGCCACATCCTAAAGAAGG GAAACCACAGTTCGTCAGAGGAATTACTGCAGCTGGTGATAATCGAATAT GTATTGGTGAGGAGGAATTGTTGATTGAATTTTactttcattgatttcta aggTCTCAAATTTGCTAATTGAAATTCGATCTTTTTGTCGGATTGCCAAT TGGGTCGGAGtaatttaaatgaaatttgaaactgAAATAGGTCTATGAAC CCTGCTCCCTAACTGTGGAATGCTGTCTATCaagcttccattttatttta ggaACTGCGGATGGGAGTATTTATGTCTTCGATATTCCCTCAAAAGGAAA TGGTGTTAAACTACACGACACTATCAATGCACACACATGTGCATTGACAG ATTTACATGCACTGGATGATTGTATGGTTTCAGCAGATGATATGGGCAAA ATCATTTTGTGGAAAGTTGGTGGAGCAGTCACCAAAACGCTCGAAATTGA AGGTTTTGGGTAGGCTTTAGTTTTGTTGCTTTGCTGTGTTTTTAATTTTG AGCTAGTGGCTTGAGTAATGGATACTATTGTATAGCAGTGATTTTATTTG TGTTCACATGAACACGAAAGGctgattttttttatgttgttaaaggtttt cttaCGGGAATAAAAGGGGCTTATTTTAGGCAGTGTCTTCATGCTGAGTC AGATAaattaaagctacttttttaagcaacgatatcctgcaaacaagtga aagatcgaaagttgtttcgagatgtgacctcacattccattgcttttgta aacaagaaaatagcaaagttgatttcgagcaaatttTCGTTTTGATCGTT ACGATCGTAACGTAACGTTAAGATCgttttgattataagatagaaaacgT TCCACTTATTATGaacacaaaaacattcgaaagagtatcagtaaaagtcc ctttgtttgaggaatgtttttttaatcaatgtattttcatcttttcaaaa catttttctaatcttgtcgcacttgtttttactacatcagcGTCATCAga cttttcaatcaaaacaaaacctttaactgaCGGTAGCTAAGATGTTCCCA TTATTTATGTCTAGATTTCCATGCACGAGCGTTCGACTGCACGAGAACTT CATAATAGCAGCGTACGGTTCTGGACACCTTCGAAAGTTTAACTGCAAGA CGGGAACAATAATCGTTGAAGTTGCAGCGCACGCTAAATGGATTAACGCC ATGGACCTTTCACAAGACGGAACACTGGTAAGACAATTACTTCTTctttt gaaacatttataaCAAAGATTTCTCGATAATATATTGAACGATCAAgtgg aacaataaaaaaaacaaagttccTCACTGATTTGTAGGTGATTCATTTAG TTTGACACATAGCCTTGTCTGCATCATttgtttttcattaaatttattAT GATTGAAGAACTTGAGATGGTGCtccgattttttgaaaaataatgtcTAC ACTATATAACTCTAGATATCTTAAAAATTATATTCTACGGGGCACATTCA GTAACGTTATTTGAAAGATTTGATCTGATTCTATTCAATTCAACTGCACA ATCATTATCATTCTGTCGCTTGCAGCATGGTATCTTTCTAAAATACTTTC TAAAGACAGCATTTGAATATCCATAAATAAAAGCATTGCCAACAATATTC AGATTAATCAGGGCTGCCAAGAAGGAGTCTATAGATTCGCCTGTGCAGGT CAAAAATATTTGGGTATCGAAAAGCATATATATTTGATAGATACTGAAGG GAAGCCAAGTGATAATCACCAAAAACATCATTGTGATGTACATTCGATTT TCTGTCACCCTCCCACGGAGTGAGCTCTCCCTTTGAGCGTCTCTGCGTCG CTTTCGAACAGTCTCGAAAATGAAGCCGTACAGCAACATACTTGCGAAAA GGGGTAGCAGTAAGAAAGCAAGGAGCAATCCTTCAGCCCAATTTGGCATT AAGAAGTCGTAATACCCAGGCTCTGGATAGTcttgaataaaaaaagcaaa tatGAAAATAGCAGCCGATAATGCGAATGCCACGAACATAGATTTATTAA TCAAACTTCTGGTAACTCTCAAATGACGGAGAGGGTACTTCACTGCATAA AATCGATTCAGTGTTAAGAAAAATAGGATGAATATCGtccaaccaaaaca aaaataccaaaaagcgTTGACAAAAACAATCCATACAGGAGAAATGAAAT ATTCTTCCCAATCATATGTGTAATAAGCTGTAGCGTCCAGAGGGAGCTGG AATGGACACGTCACCAAGTCTGAAACTGCTAACCATAAGATGAACACAAA ATGATATGACTTCAAAAGTTGTCCCTTTATTATCACAAAACAAATGAAAA GGTTTCCTGGAATTCCAAATATGGTTATCAAAGTACTGTATAGCCCAAAG CTCAGGTTTAAATATTTAAGTGATTTGCTTTGCCAGCATGGAGCAAGTTC ATTATCAATTATCTTGGACGTTGAATTACCTCTGAGCGACTTGTTCATTA TGTTCTCGATATTTCACTTGTCTCTCCATATATAATCTTTGATTTCAGAA CGTGATGTTATGAATCATTCTAAGAACTCGTTATAAATCTACAAACTCAT GTCTAATTACTTTATAccgataaaaacaaacaaacaaaccgTCGAATCTC TTTATTAATTCTTTAAGATATGAGGTAgaagaataaataaaaagaaagta gttttaataaaactcactgggagttaatcaccatggcaataatttcaaaa cgaggcaagtgatgttcgtgacgtaatttatgaaaaggtcaatTAAAACA GCAATTTAAATCTCAGCTCAATAATCCTCACAAAAATGATGCAGCTCAGG CTCgttcttcaaaagaaaatatgaGAATTTAACAAATTTTTCTCTTTCCA ATTTGTTAGGTGGTGACAGCCTCAGAAGACACCTTCCTTAGACTTTTCGA CGTCGAGACGGTAAGTAAATCTGTTGGACTTAAGTTACGCCTTGTCTAAG CTCTTACAAGGCGAATGTTTAACCCTTCGATACGTCCTAAGTAATTCAGC CAAGTTGACTTTAAGAGAAAACCTTTCCAGTTGAAAGAATTAATATCGAA CAGGCACAGTTGGGTAAAAGTACCAAATTAGTTTGAGTAGGGTTAAGTAA AAAAAAGcttctttgatttgattttcacCTTTTCTCTCTCCATTTAGTTC GAACTGAAGTTTCAGAAAGCGATCACAGACGTTCAATTGACAGGTGTTCG TTTCATGGATGCGATCGACAACAGTTTCGGTGTCACCGGTTATGATTCTT CCGAAATCACCATCTTCAAACCTGCTAAATAGACCGCAAGCTCTTGTGTT TTATTGTGCTTCTCACTTAAACAAATACTTCATCGAGTGCCATGACggtt ttcattttgcttttaatAAATCcgagatgaaaaaatttaatgtttatGAG TACGGAAAAGTAAGCAAAAGGAAAGGAAAAGTTTGCTCTCACAAAATGTG AACTGATTGTCATACTCTGCAATTTACTGTTTGAGTTTTTCCTCTGGCTT TTTCTGATTAGGAAATCAAACGATTTTGATAACGTTTACATGTTTAGGTC GAGATACCTTTCAGCAGAAATTCATCCGAAACAAAACTGTAATTTATTAT AATAATTGACTTAATTATTTAGTgtagaaaaacaattttaaaattaattt tgccTGATACATTGTGTGAGGGAAAAGTGGAACTAAATTTATTTTAAGAT TTCAAACCCTTGCAATCtacaaaagttttaaaatgattaatttaatttaa cACGCACAATTAGAGGTGTTTAATGCTCGAAATTTCGTTCCAATTTTCTT CCTGACACGCTGTATTCGGCGAatagaaatgaaatatttgaatgTTATAA ATTATATTAGagaagattttttaaataatgcaTCAAGAGAGAGACTATGG GAATAACGAATTATTTATGCTAACGATGCTTGCTTTTTATTATGTGTCAT TTGTGTATTATATTTGTCAATTTTGAATCAGAAATACATATCAAATATGG TTTTCAAATTAAAGATCACTCCTTTTTCGTTTTTACAGGTAAATTTTATA ACTAATTTTCTTGTATGAAATGTTTTTGATTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072368TCONS_00072368Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072368-proteinTCONS_00072368-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:339802..344735 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WDR54PREDICTED: WD repeat-containing protein 54 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.97 16.23 44.35 52.25 66.91 51.77 32.62 33.82 29.16 27.11 24.1 21.96 12.67 12.07 10.49 13.1 22.24 18.67 8.3 10.55 17.55 16.78 39.57 34.5 16.44 19.09 16.38 10.55 28.47 28.45