XLOC_044816 (gene) - C. hemisphaerica

Overview
NameXLOC_044816
Unique NameXLOC_044816
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_71:361934..367104-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044816 ID=XLOC_044816|Name=XLOC_044816|organism=Clytia hemisphaerica|type=gene|length=5171bp|location=Sequence derived from alignment at scaffold_71:361934..367104- (Clytia hemisphaerica)
CTGACGAAGAGGTTCGCTATATAACTATCAAATATAGCGGCAACGAAAAT TACTTTCGATTTCGAAGGAAATTACACCGAGATAACAGTGGTCTGCAAAC AGCGTTACAGCCTGGTGAAAAAAGTTTTGGCTTTACTTTCACAATACCTA CGAATATACCGAGTTCTTATGAAGGCGATATTGGATACATTAAATACCAA ATGTCAGGTATTAGATTTTTCTTGTTAGTAGGAACGAACGAGCATTATTT GATAGAGTATGCTTTTACTATACAAGTTTTGAATTACTATCAGTCTTTAG TAGTATTATAAAGTTGGTTGAGTTGACGTCAGGAATCTACTAAAATAGAT GAATAACTCAATATTGCGACATCTTCACAAGAAAAGACAGAAGACTTTCA AAAAAGAAACCACATTCCCTGTGATATCTAGCTGTACTCTTTGGATCAAC TCAGATCTTTCCAAAAAGAAATCTTTAACGTTTCTTTCTAAATGACCGTT CTACTCGTATTTCAGCAAAGATAGATTATGTCAGAAAATCAACAGAAAAT GTGAAAAGAGTCATCAAAATTGAAGATTTAATTGATTGTAATGAAGAAAA ATACCTTCGTGGAGTTAGTAGCACGAGAGAGACAAGTGTAGGATGTCTTT GTTGTAAAGCTGGCACTCTTACGGTCAATGGTAAGCTTTTTGGCAAGGTT TATTTTGGGAGGGGGCGTACGGGTTTGACGGTGTTATGGTATTAGTTCTT GTTTCTGTCGGTATTTGAAGAAAATCGTTTTTGGTAAGGTTAATTTGATG CGACTCGAATTCAGTGGTCCCACGCTACCAGGGGTCTAAGGGGCCATGGT CATCTCACCTATTTTCAAACGATATCTTATTTTTTAAATATCACTGTACT CATACTTTCAATAGCTTTGTTCTCGGCAATGTCACTCTGAAATAGCGTCA TTTGAAGGCATATCAACATTTTCTATTTTTGGCCCCTTTACATTCTAGAC GACCATAGCATGAAGGTAGAGCATCTAGCTACGGTGCGCAAGGTTTGTGG GTTCGATCCCCAGTCGGTTCATACCAAAGATTCGCATAATGGTACTTGAT GCCTCTCTGTTTGATGCTCAGCCTTTGGGTAAACAGCTATACGAAAAGGC TACCCTTCGTAGATCTCAACTGCAGTCGCAGACTTACTTACATTCTAGAC CATGGCGTGGGGGCGAATCAGTGAATTTTTCCAAATATTTTACATTCTTA GGGTATTTTTCAGGTTTGTTCCTTTTTAGGTTTTGTGGATCGTTCCTGTT ATTGCTATGGGGAAGATATTTTAGTATCTTTAGAAATTGATAATAACACG AGTCGAAAAATGAGGAAATCGAAAGTCAAACTAGTTCGAAATGTAAGATA TAGAGCAACTGGAAGTAATGGAAAAGTAAAAGATAAATGGTTCACTTATG AAGTCAATTCTTTAAAAGGTACAAACGCTGCTGTTTTAATGACCCAGCCG AAAAATCATGTCGCTTTGCAGGATTTGTACATGCTATGACTCGGTTAACT TTCTCTTCAGCTTCCAATCTCTTAGTAGTTCTTTAAGCCAGTTAAAAAAC TCACTGAAAAAATACACCTTTTCGACCGTAGCCGCGCGGGCATTTTTTTG TCCGCTTTATTCAACTAAAACCATCCCAATTCTTTTTTGACGCATTTTTC TATTGTCTATAGGTGCAAAAGAAAAGGACTGGGACGGCTTTACTGGGATA AAGCGGACAAAAAAATGCCCGCTCGGCAATCGGTGGCTAAGGTCGAATAG GTGTATATCCAATCACTGTACACCCCTTGCTCAGAACTTAAAGCTACAAA ACACCCCTGTCTCATCATACTCGATATATTTTGTTGTTAGTTTCTTCGAA AATCAAAGTTAATAAATAAATTCAATCTATAAAAAGGAAGCGAAATTCCG AGAGGACTAACCATGAAGCAATGGGATAACAAGGCAATGACAGTACCGGA AAACTCACCTCCCACTATTTACAATTCATCAGTCATCGAAATATATTACC GTATCAAAATGAAAGTAGTCGTTCCCTGGGGTATGGACGTTAAACTTGAT CTACCAATCAGTATAGGTACAAAACCACTTGTTCAATCTATCGATAACCC GGCATCAGAAGATGGAGCAATATCCTATCAATTACCATTTAATCCAAATC TACCAACTGTACCTTACCCCAGTAACCCTCCATCTGCACCAACTGATTTT ACATATCCACCGATGCAACAGCCATACTCAGCAGGTATGTGATAAAAGGG CTAATGGAGGATTCGATTTGAAATTCATTCATAACCCTATTAACCCAGCT GGGCACACAGCGTTCTTTCAACGTTTATCTAACGTTCACAACATCCATAT AACGTTAGATGAACGTTGAAACAACGTTGTGTGCCTGCTGGGAATCGAAT TCAATTCTTTTTAGACCTTTATAATCCCGTGTATCGACCAGCAAAACAAC CGGTCATGGATATCATAACAAAGATATTCGAAATTAGTGATCTAAAACCG TTTAGGCCATTTCAAATTTTTTGCTCTTTATAGGACCAAATAATTAGGAT GACTTCATTGAACGGTTCGGTTTTCTTCCCGATTTTCCTGCACCTGACTT GACCCTTGATTTTGATATAGGGGATGCGTACCGTGTATGAAATTCTCATC CGAGAGTGTTTTACCTAACAGACTGAGTGAATGATACGCTTTCTGTGTCT CTTTACAGTCTTATCAAATTTGTGTAATGGCAACGAAAATGCTATAAAAT GAAACAGGTTACCCCAAACTTGGGTAACTCTCGGACATGAGTTTTATACA CTATTAGCATTCCCTATATATTAAATCTAATATTAAAACATATCAGAGGG GATGCGTCCAGTCTAGACTTGACCTGATTTTGAGGACCTTATTGTAATTG TGTCATTTTCAGACCAAATTATTCCTCTTACCCTTGGTATTCATAATATG CACCACTGCGATGTCTTCTGACATTACGTCATGGAACCAATAGCTCATTG GTTGGAAGTGATGTAAAAGCAGTCAATACGTCACTTTCAACCAATCAACT ATTGGGTGGAACGGAAGACATTGCAATGGTGCATATCATGAATATCTTAA AAAATAATTGCAATCTATAAATGATATATTGGGGTATCGCTTTTGTTATA AAACTATTGCTCCTTAAAGAGAGTTGGAGTTTACTCCGCTTATTTTGCGG TCATTTTAAACCCTTACATGCCTTCTAGGATATTCACAACAACAACAACA ACAACAACAACAACAACAACAACAACCCCATGCAAGCTCAAATGATGCTA ACCTCAATATTAATTATTCTAAAGAGATGGAAGCAGACAGTGGTAAGATT TTTCTTATTTCAGTGAAGTTGATCAGCCATGAAAGAAATTTCCTCAGTAA ATCTCCATTAAATAGACTGAGACTCAGACGGCTTTTTTTCTACGCAGTAA CGCCTACCGCCTTACTTCGTCGGGGAAAAGTGACGAAATTTCGGACAAGT GCCGAATATTTTCCCCGACGAATATCTTCCCCGGCCTTAATGCGTTTACT AACTACCAGCAAGTGACGAATTTTTCCCTGACGAAAATTTCCCCGACGAA AATTTTCCCCGATAAGGTATTCTAATTTGCTATTTTTTCGAATGTTTAGA GATCAGGTTTTTGGACTCTAAACATTCGATGTTTTGACGTCATTTGATGG TGAGGGTACGTACAGTAGGAAAAATTTGCGTCAAAACACTTTTTTCGAAA ATCATCAAAGTGGAACCCACCAAGAAACAGCATATTCTTTCCCGCTATTT GTTTTGTTGTGAGGTACTCGCGCTAAGAAACTATCTCCTTTTTCATTTAG TAACTTTATCACCAAGTCCAATACCGCAACCATGCCCACCACTACCATTA CTAGGTTACAGCTTCCCTCCGCCCTCATATGACGAGGCTTTGAATAACTA ATAACAGCTGGTATCGTTTTCAATATGAGAGAGGATTGGTGAATAAAAAG AAGAAACTACTGGTGCTTTGGAGAGCTCTATTGGTTGTTGTATAGTTTAC CAAAGCCACGCACACCATCATCATTACCAAATGACACCGCCCCTCCACCC TAATTGAATAAGGTTTTACGACATTTATGGCATTATCGCAAAAATCAAAT TGCTTACACATTTGTTTTAAGCAACTCCAATTTCGGGTCAAAGCATTCTA GCTTATTTTCTGAAAAATTTGCTTGGACTAATCCTGATATTGTACCACAT TTATGCTTATTAAGTCAAGGGCTATCGTTTTCCATGTTTAGATTTTCTAA AAAGCTTTTACTTTACGAGATAGTGAAAAAATGGCTAATTTCAGGTTCAA GCCTAAGCAATCTGCGAAATCTGTTTGTTTATAAAAAGATGTGTACAGTC GGATGACTTTACCAACAGCCTTGGGGCCACTTTTAGCTTTTTGATAGTCT GGATAGGCGCTGATAAGTTTTCCGGTGTTATTTGGCAGGTTTCACTCTTT GGCTTTGCACACACCACTAGATCAAGTCTCTTTTTGGACGAAAAACAAAC AGAAAACCCTATCCAATAATACACCAATTTTTTTTAAATTTTGGAGGTAT TTTCATGTTTTTATTATTCATATACTTTGATGGGGTTTTAGCATATATTT TATTGTTTTGTTGTTTTCTTATAATTTTTGAAAACGAAAGTGAAAAAATT CAAGATATCCTCTAGTCTACTTCACTGGACTCGTAGACTCTAGTCTACAA TAGACCTTTTCGTAAATTACTTTACAAACAACACTTGCCTCGTTTTGAAA TTATTGCCATGGTGATTAACTCCCAGCGGATTTTATCAAAACTACTTCAT AAAAAAATAACTTAATGTCTCAAGAGACATAATCACCATGGTAATTGTTT GAATACGAGGCAAGTGATGTTCGTGACGTAATTTATGAAAAGGTCTATGG ATGAATGAAAAATGGTTCCGTTTTTCCTTCAGTAAGTCTTAGAAAGCTTG AAACTCATTCCTACTGACAGATACAGAGATTTTGTATAAGAACCAAAATT GTTTTAAGCTAATTGAGCTTTTTCAGGGCACAAAACAGGTTTTTGTTTTT ACCCTCTGAAAAAGTCTACCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072162TCONS_00072162Clytia hemisphaericatranscript
TCONS_00072161TCONS_00072161Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072162-proteinTCONS_00072162-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:361934..367104 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.99 2.01 1.14 1.02 8.82 6.9 4.6 4.43 2.9 3.47 4.34 3.03 3.38 2.57 2.53 1.86 5.08 4.07 2.27 3.33 4.47 4.84 2.53 4.08 7.18 6.51 2.53 2.1 1.76 1.63