XLOC_044605 (gene) - C. hemisphaerica

Overview
NameXLOC_044605
Unique NameXLOC_044605
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_64:41749..45649+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044605 ID=XLOC_044605|Name=XLOC_044605|organism=Clytia hemisphaerica|type=gene|length=3901bp|location=Sequence derived from alignment at scaffold_64:41749..45649+ (Clytia hemisphaerica)
CCGATGGTCGAACATTAGGCGGCACATCCCCGTCAGTTCGTAACCCTTGC TTTGATAGGTATATCGTGTTCTTCTATATTcagaatttttaacattttac aaCTACAACAAAAGTAACCTCTTTAAACAACAATGACCAACATCTTGAAC TCTACCACGTCACCAAACTTGATCGATTTCAAATTCGGTCAACCCAAACA TTACCAGAACACATCCAACGCTGTATGTTTCACTCTCTTCACACCTGAAG CTGTTCAAAACACTCATGGAATCATTTTGATCATCGGTTACTCCATTATC ACTCTCTTAGTCATCATCAGTAATACCACCTTAATCGTTGGTTTATACAA AATCAACACATTGTTCACCGTAGCGCAACGTCTATTCATCTTGATGTCTT CAATGGATCTTATTATCGGTCTTGTTTTTCTACCACTTCAAATATACATG ATCTACACATCAGAACGTCAAGGATGTGGACTCATTATGATTCAAGCGTT CGTATCAATGTTCTTCCCATACATGTCTGGCTTAATCCTACTCTTAGTCG TGGTACATCGTTTTTTCCTAGTCGTTAATACGCGACTCACAAAGAAGTTA GCGCACCGTAGAAACGTACGTATCTGTCTCTTCATCTCCACACTCTTTGC GGCATCCATGGCAACGTGGTATGCGTTCCAGAAGAGATCTGACAGCCTCA CAGCTCATGGTACTTATTATTTAACAGCTGGATTGACCGTTTGTAATTAT GTGGTCATCATCACCTTcatgaatttcaaaatggtccgatttCTCCATAA AGCTTCAGAAAAACGTAATTAAAGTTCAGCTCCTACNAATttcaaaatgg tccgatttCTCCATAAAGCTTCAGAAAAACGTAAGTAAAGTTCAGCTCCT ACCTTATAAGAAGAAAtggcggaatttattttggcgatttaatgAGActt ctaaatttggcgagaattaattttggcaaacgacccattttttgttgaat atttaagggctctgaccatagtgaatttttaatatttgccacttacaaaa tgTAAAGTTCTACTTGCAgtagcccacaaaactgtggcatgttatacata ttctgttaggccaattatccgtgagtctgaaaatttaagaatcgcaatga aaaactttgatgaaaaagaatatgaagacttttgcgaagaagagtatttc aactttgaagagcttatctatcttcgatgaagaaaaaacattttgaaaat ctttttgcggtagatggtatcttttatcgaactaaaattattttttcgga aaatttttctgaaagcttatttgcttcaaaatcttaaaaatagtgctttt tgaccaattttccatcccaatttttcatagaaaaacagccataacttttg atgcatttatttagaaaattttttttataaaaaaaggtgatgcaacatat tattaccgtctttttaaagttcataacgtcatttttgctattaaattctt aattactcttaagggattgaTTAAAAaccaatttataaaggcaattcttt gttgaaagtgtaaaagaacctaaaacataacttttatgctcaaatactaa aatcaattttccgactatggtcagagcccttaagggctctgaccatagtg aatttttcataattgccgtgtttaaaatgtgttttctgactgatgtaacc aacaaaactatggcatgttatacattttctgttagacaaactattcctga aattgaaaattcaaaaattgcattgaaaaaaatcgatgaagaagaaaatg aagacttttacgaggaagagtatttcaactttgaagagcttagtttcggc gaagaaaaaacatttcgaaaaaattttcgcagtagatggtgtatctttta cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNtaaaggcaattctttgttaaaagtg ttaaagaatttaaaacataacttttatgttcagatactaaaatcaatttt ctgactatggtcagagcccttaagcttAAAAAGGATGAAAAAGGGGATTT TCGCCGagatttctttccgccaaaatttattctcTTAAGGTATTTCCCGC CATTAACCCTCATGTATTTAAATTCAATCATTAGTAGtaatttgtattaa aaattaACTAAAATCTCACAGAGCTGTAATCCTATATTGTGAAGAATAAC TAAAAACTAATACAGTCAACTCGCTCTTATTCGAACTCTTTTATTCGAAC CTTTCTGTAATTTGATTGGTCCTCTCAGCTGAAAATTAATCAAATTCTCT CAGAAATTATCTACTcattctataattcgaaaaaaattcttgaactcttg aaaatcgaatcagAGCAATGAGTCAACTGTATCTACCGTACATTAGGGCC AGCgcaaaccagtccaacatttcattcaacatgatttttcaatgttgggt aaaaaatgtttgatggaaaaacttgcgttgGATGAAGCGAAAATCAAGGC CGAGGCAAActgatccaacatttcatccgacATGACTTGCGGAAAAAAAA tgatggcgatcaaacttcatccaacaccgtccaacacgatttttttcttc tttatttgaattttcatttttttccaaaaatttaaattgacGCAAAttga tccaacatttcatccaactgaagtctaatttgttcgaattacagaaaggt tTGAATCATATAAAGCATCTGACGAGGGTTTCAATTTGACAGAtactgag aattagttcgaattatagcgaCATTCGGATAATAGAAGCTCGAATTAGTG AATGTCCACTGAGTAGATCGGAACAGAAATTTTACCCTGGCTCCTGTACG ATTTACATTTCACTAATtagtaatattttattttctatcatTTTAGGCAT CAAGCGAATGAGTGTTTCTAATTCAACCAAAAGTCGTAGCACGTATCATA AACGAGTTGCAAAAACATTGGCTCTTATGTCTATAGTTGTGTCTGTTTGT TACACTCCTATGGCTGTGTCTTTTGTCGTGTCAGGTCTTTTCTTATTATA TCGCTACCCTCACATGGAAGTCATACAAATCATCATACCATGGTCACAAA TGGTTATGACTTTAAACTCTGCATTGAACTCTTTCATTTATATCGTCCga acaaagaaaatgttgaaTCTGTATAAAAGGGTgttgaaaagattttgttg TCGTGTTTTTGGCAGAGAGAATAAAGTCAATCGTACTGTTGTCATGAGTT TCGAAATGTCAACAACAGCTAGGCGTAATCAGAGGACAGAATCCACGAAC CATGGCAGTGATCGATTTTGAATGACTCTACTCGAAATTATCCTTCCAAC GATGAACGATATCATTCAATCACTGGAATCATATTTTGAACTTAGAttgc ttttgatttttggtcAGCCGATTCCATGTGCCAGTCACCTCCAGtagtag taagtaagtttgcgaccgcagtcgagggcgaccagAAGGCTCCCTTTTTg tatagctatctacccgaaggtagggccACTCCTTTCCCTAGAAACGCATG GAGTCACCTCCAAGCCCATGGGAATGTTCTTCAGCCAGTAGGGATAGAAA AGGAGGACATTGTCAGATGAGAGTATTGGATGGAGATCTCGAACTGAGGA G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071838TCONS_00071838Clytia hemisphaericatranscript
TCONS_00071839TCONS_00071839Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071838-proteinTCONS_00071838-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_64supercontigscaffold_64:41749..45649 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.93 0.66 0.56 0.27 0.5 0.72 0.44 0.97 0.42 0.45 0.29 0.17 1.15 1.7 0.14 0.3 0.88 0.62 2.03 2.03 0.63 0.7 0.93 0.65 2.78 2.66 0 0.23 0.48 0.49