XLOC_044475 (gene) - C. hemisphaerica

Overview
NameXLOC_044475
Unique NameXLOC_044475
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_62:257127..268521+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044475 ID=XLOC_044475|Name=XLOC_044475|organism=Clytia hemisphaerica|type=gene|length=11395bp|location=Sequence derived from alignment at scaffold_62:257127..268521+ (Clytia hemisphaerica)
cataaatttgcattttgcctttttttttgttcagataCAAAAATGATAGT GGGATTTTTAGGGACCAAGATCATGTATAAAAAGGGGACACTTTCAAATG TTTtacatcaaatcaaatcaacaacCACAAGCGAACGACCAAGAcaagaa aataaaatcatttttgagataTAAAATACCACAAGCAACAATAATACAAG GTAAGAGTTTTCTTTCCTCTCTAAAGCAGTAGAGTGGTGTCTCGATCGAA ACTGGGGAggcattttaagtttttggtattttttctctTGTTGGCTAAGC AGACTGTTCATGCTGAGGTGCAAAAAAGCAAGGGTGGGGTGAAATTTGTA TTCAGAGGTGCCTTTTTCACCCCTTGTCTTTCACCGCCCAAAAGAAATTC AGCCTCTTGGGGGGAAGGGGGGGTGGGCAGTTGCCCCCTCTGACCACCAC GATTCTTTCAAATGGTAGCAGCTATTTCTCCCTTGTCATGGGCTTCGTCA ACGGAGGGGGTCCGGGGGCATGGTCCTCCACTTTTTTACAGACCATGCCA TACTTTAAGCCAtgaaaactattattctccccaattagataacgttttaa ggtgttttgagggtgtaaaaagtggcaaattttcttcgtcgatcaaccat ggtgggcgccatttgtttccaaaatatttcCCCACCCCCTCCttcactca aaatggctcgccggggcccatgcTTGCGTTTGCTTTAACCTTTAAAACCG TGGGTCAGGTCATATAATCTTAGTCACATTAAGGTCACACTGTTTTTGTG TCACCACATTCTTTTTAAGATTTCAGCTAAAATTTGGAAATTCTACTAgt cccaaattttcaaatttattttcaccTTTCATAAAGTGGAGTACATTTTT ATGAACCTAAATATTGTTATTTACTTTGAGAGATGTTTAAGTTCAAAATC AAGGCTTTTAAGAAATATGTATGGCTTCTAGTCGCATCAGCTTAGCATTC CAAAGAGTGATTTGTGATAGATTATTCATGAAAAGTGTAAAAGAACTCAA TACACAAGTTTTATCTTTAAATCTCATATCCGATCTTTTGAATATGGTCA GAGTCCTTTTTAAAGCAAATGGACTGTAATgttctttctgtttattttag AGGACGCAGAATAATAATCAAAACCTCTTAAACGATGTTGAAATCAACAA CTTTAACTTTTCTCCTATTGGTCCTTGCCATGACAACAGGTAGGAATCTA ACTTGTTACCATAGTAACCGTGCAAATAATTATCAAATCCAATTAAGACA ATATGACGATATAGGATATCTCATTAATACGTTTAATTAGCTACTAGGAG AGTGGAGCTTTAAACGTACCTTTGCTCGTCTAAAATTGTTTGTACATCAC TCAAAAGGGTGGGGAGTTTCCTGTAGAATCTCCTATTTACAGAtaaagct gttttttttttaatgttacCCGCCACAAAATCCTTGTGAATAGGGttaaa ttttttcactaaaatattagTTGACTAGCTGAACGACTACGAGACATGCA CATAATATAAAGTTATGTAAACGAAAACATCATCCCCTGTCTCAGCAAGA TCCagatcattgagtttcaagcccgaagggctagaggtcaatctctaacc tttctcaggcaagaaaaattgaagccctaaaatatgcgccgtatttttga tgacggattgaatctagcaattcctttgtcttcgagtgatatatttttcg aaattaagcggtaaattttagtttcaatNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN tttcaatctgtcatttgtgtaaaaaccaggcgggtcgctcaaggccgcgc aactttggtaggatttgttggcttcaaatcctaccaaagagattgacctc taagccttcggcttgaaactcaactGTTCAGTAGTATTTATATGATGTTG TGTTTAGCCTATatgaacaaacaaacaaacatcaTATAAATGGACCCTAA ACAACCCAATTGGCACACACACAATTGGTTATTCAACGttcacaaacaac aacaacaataacgttgtgtgcctgctGGGAAACTTACGAGACAAGATTTT CGAAAGATAAAATCAGACTCCCTAAAATCTACCAATAATCAATCTCATTC TTCTTTAGAAGCAACAAGATATCATCACATTGACCAAGATGGTATTTTGG ACGATTTGGAAAGAGAAGCATATTCGGAAAACAGGTATCGACATCTCTTG AAAGAATTAAACGATGCAGAACAATATAGTGATAGGTGAGTTTAATGACG TCTTTCTAACGTTCAATGGACgttttggacaatatttgaatATTGGTTGA ATGATGTGTCGCACCAATAGGAACCCCTCTTGTTTTACTTTGACAATAGA CTTTAAAATTATCTTGGGGACGGGAAGAAAATATGGAAATTACTTAAATA GCAAACATGTAAAAAGTTTCAATTCTTGAAATGTTATgatgagagaaatt tcaaatgaaaaatttacaGAAGAAAGATAGAATTTTAATTCTTCACTAGT TCAAGTAAAAAAACACACGTTACCTTAATTGcctactcaaagtttcatgc cacATACAGAATGGCAATCTTCAATGAAATACACAAACtctataaaaatt taattttgaaaatctttttaggtTAAGGAACAAATTTTACGACAATCAAT TCTTCAATGAGGACGAAGATGAAAATCGAAATGAAATCAAATCAGAGTTG GATCCTGACGGTACACTTATTAACATGTACGAAACAATGGAAGATTCGAA GAATCGAAAAACAAAAGGAGAAGAAAGTGAAGAAGATAATTCAGTTGATG ATGCAATAAATGACTCAAGTTCtttagatgaaaatgaagaagatccTTCA AAATCTGATGATGTCAACGATGTTGATTTGACAGAACAACAAGACGACAC AGGTAAACATCTAGAATCAAGATCATACGAGATGAGGCAATCTGTTTCTT TCCAAAATGGCAaaccaatgttgtttcaacattcatctaacaCTATATGA ACGTttttaacgttagatggacgtcgAAACGAAATTGCTTGACTATAAAC TCAATCCTGGTACAAAAAAGTACCaagaaaaagaaatccaaatCTCAGTA GTTGCAGgaaatatcaataaattttgcGTTTAGGAAAATAGCGACAGGCT TCCAATCTCCTCTTGTATATTGTGTATGAGGCTTTTAATAACTTCAAGAG ACTGTCTAAACGTCGAAAAAAGCCCAGAATAGCTATAAGCACAGTTAACA TATGCGAAGACTGGGGCCGAATGTAATTTCGCATAGCTTAAAAAACTAGC TTAGATTCGGTGTATCAAAACTTTCACTCAGATCCACTCttggaatttat ttattacCATCCAATTGTTTCATCGTCTTCTCCCGGGTGTTTAATAAGAA TCCCCACccaataataaatttttcgaacattttccattcaggacattctt attccaactccccgcttattaatttttgggaaaatgtttatAAAAGCTCC CTCTTTCGCCCTAATTCTGCTAtattagcctccttttaaaaagttttcta gcCAGGAAATTTTTATTCCATCCCCCACtaaattttgagaatctttcCTC CAAATCCCTCcttttattaggcacctgagagtatcTAATGTTTACATCGT CCGCCAGTTTTAATAATGTCAGTTGAATGTTGAAataatgttgtgtgcca gctgggaggcTACTTCGATATATcaacaaacattttttttagttttagtg aAAGGATTTGTCAAGAGGCTCAAAATTGGTAGATCATCACGAATTTTGAA GACGATTCCCACGTGGCCGAAAGAATGGAAAGTCAGTTTCAATATCCAAC CATATCATACGCAATTTAATAATTGGAGAAGTATCATCCATTTCACGACC GGTAGTAGTAGAGGACCAGTAGGGTCAAGAATCCCAGCCGTATGGTTTCG GCCCTGGTCCCATAAATTGTATATTGTGTCATATGTCAATGACAAAGAAA ACACTTATACTTCATCAACTTTACCAACAAATCGATTCACCAGAGTCCAG ATTTCACAACGCAAGCAGAATAATGGCAAATATATCTACCAAATCAAAAT CAATGGAATAAAAGTTCGCTCAAAGGTGAATCGAATCCCAAGAGAGTTTA ACAATGTGCTGATTTATGCACCAGACAAATGGTCAAAAAGTAGTCTTGCT TCTTTGAGGAACTTCAAATTTGAAGGATATTTGGAACCCAATTTACCAGC ATCCAATATTGTCCAGAGTGAGTATCAAAAAATCTTACGTACAATGTGTC CCACCCTCCCCCCTCCCCCGAAAAAatggacaaatttttatatgatgtaa aattctcaaaagtCATTATTTTAATTGGGCTTAAAATGATCGAAATAAGA TTACaattctctgttcaatcaatagatattccATTCCCAAGATGTTTGAA TAGGTTTATGAGATTGAAATATTAAGTATACAAGTTGCATAACATTTCAC CTAAATCATGGggattttatataaaaatgtgtCCACTTTTTTTGGGACAG ATGCACTAGTTGGACCTTGATTTGTACAATATTGACATGTAAAAGTCTAT TCTATGCAACTACTGAGAAAGAAAGTGAAGCATTTTGTTGGTGTTTAGTC CTTGTGGGTTTCTTTCTCAAAAGTCttgaagtattttttcaagtaataca ccttttcgatcgtagtcgtgcggtcaggcgcgtgccactttcatcccact aaactcgatctaatccttttttgacacatttttcttttgtatataggtcc aaaaaaaggactgggacagttttagtgggataaagcagaCAAAAAATGTC CGCGCGGCGATTGGCAGCTACGgtcaaaaaaagtgtattaataATGAACA TAAAATTTACCAATTTTCTAGAAAACTCGTTCGCAAAATGTCAAGAGTCA AGAAGAAGAACTGACTGCAGCAAAGCTAGCGATGAATTCCGTACCTTTGA TGGCACCtgtaataataaaaagaaccctaAATGGGGAGCCACTGAAACTC CACTCAGCCGAATTATTGGTAAGGGCGTCCACACGTCTTTTTTATGATAA AAACTAAACTTTTGAAGCAttctgatgttcttaactgttttaagttttaa gaatggaaatattttctaatcattctaattttcaccatttttgcgAGTAT TTTCTGCAATGTTCTAAGAATTTAGGTGTTTTAAAGTTaataaagtctta aaatgttctaaacttgttgtcgatattttggccattgaaacCTCAtcttc ttttatataaaaacgtgTAGGTTCATATATAGAATGACAAGAAAGACGCT CCGATTTTGGCCTTCGGTCTAAAAAGGGGTTTGAAGGGGTTAAAAGTTCT GATAGCTAAATGGGCTTATTTTCCTAGAATTTAGTCTAATTTTTGTATAT TTGTCAACAAAATAGACTATGAAAATAAACTTGATCTGGAAGGTGTCTGT TAGTTACAAGGGCGTAAGAAAGTGATTGAATAATATTATGTTCCAGACGC TGATTATGTGGACGGTATCACAACACCTCGAGGATTCCCAAACACTTCAC CAGTCGTTCCAACTGCAAATCAAGTCTCAGAAGCTGTATTTCAAGTGGAA ACTACTAACAATGGTAATGGGAATGGTTTGGCTGTTTCTTTCATGACATT TGGACAGTTTTTAGATCATGATTTAACTGAAGTACAAATGAACAGATGTC AACTCAAAGTTTTTGGAAGGTAAGATATGTTTCTGTTTGTCTCAGGGACG AAAGTGAGAGACgcaaaaatgttatcaaaagcGCTGTCGACTTCACTTTT AttgatagaaagaaaaaatcGAGTGGAGACACgggaaagcgtttcaggtt ggtgggatgcaccaacgcgaaaaaaaacttctcgtttCCTCAAACCTTTA CATTCTTGTGTTACACGTTTACTTTTTAAGAAGAATATCCAggtgttctt aaattttttagtttcaggcctaaaaatgttctttacgtgttcttattttc accaccaCGTATTTCTGTCCATCTTCTTAGGCAATCAAGGTGTTTTAGAT TCCGCAatgcttttaaatgtttttaactagttcttaaatattttggccat cgaagccatatgttcttatatatactTTCTTcgttaaaaaacgtgtattt ttctgtgatttcttTATGTGATGTTACCCcactgacacacaacgttgttt caacgttcatctaatgttcataacgtccatataacgttagatgaacgctg aaacaacgttgtgtgccagctgggtgtcTATGATTTTTCTAGCCTTACAG GGTTTTGGAATTGGGCCGATACTTCTTNGGTGTCTATCAGAGGCACCaag taaattttttgaaatttctcctggatttttttgattttaaaaacaacACA AGGACAAAAATATTTGCAAACTCTATTGATAAAATCAGTATACTAATAAT ATAAAAAGTCATCATCCAAAAATACTACCGCATTATCGATCAAACCatct aaattcaatttttggcgtctattttttatcttagaaaatatatttattCT TTTTACTCTAGAATTCCAGTGGTTGACATATTTACtgattttaattaaat ttcatGACCAAGgctcttttttatcaaaagaaaaaaatgttatcCTTTGC TCAATATTTCGTAACtgcagaaagaaaagaaaaaaccaaaaaaagaatag taaattctaaaatagaTAATTTTACATCTGATAATCTTGCCGTAAAACAT GTCAAAGAAACAGTCGCATTCCATcctattttggtttaaattaaaTAAAG TTAAGATTTAACCAATCAAACTCCAACAAGCCTCGTTTTCTCCacttaat acacccctgtctcacagccccggtggaacttttttcctcagtggggataa aaattcctatcgaaattcaagttgggataaaaattttattgttccaaggt taaaaaatccaatagggatggttttagagtgcaGTTTTTAAACGTTGatt ttcgaatggggatgaaattaaagTCGATCTctcagtggggctaaaattcc cGGTTGTTGGGGACAAaatatttgccaaattttctagtGGCGCTAGGGTC CCAgtaggtctgtgacacaggggtgtcttgttttttcgacgtttatctaa cgttcacaacgtccatataacgttagatgaaagttgaaataacgttgtgt gccagctgggaagaaGCAGAGATCTAGGATGCAGAGTTTCAAGTTTTTGA GGCAGTGAGATTCATATTTTAGAAGCAGAGTTTTAGATCTGGGAATGTGA GAAGCCAAATCTCAAAAGCTGAGATGCAGGGGTGAAACTCTAAAAAGTCA TTTGGCTGTAAAGGTACATTGATCGTGTACGATGGAATCAGTCACACCTC ACCAAGCTTTGTACTCTGGATAcagatttttcatttaaaaaacataaaat cagGCTTTATTCATTTTAACTAAACTTGTAAGATTTTTTCATCTTCCAGA TGCGACAACATCAAAGAATCCTTCGTTTATCCATGTCTTCCTATCCTTTT CAACGACTCGTCTTCAGAATGCACAACATTCAGCCAGTCTGAATCACTCT GCCCGGAAAATGATAAACGTCCGGGAATACGTCAAATGCCAAACCATCTG AGTGCTTTCATTGACGCCTCACAAATCTATGGAAATAGTGATACATCAGC TGAAAGATTGAGAGATCAAAATGGTAAGTACACACTCGGGAAATAAGAGA TTNCATCAGCTGAATTATTGAGGGATCAGAATGGTAAGTACACACTCggg aaataagagatttccaatcctggaaatatcttgaaaataggaaaatatga cttttctgtatttccaaagttgtggaaataccatatttcatgatatttcc aaatctgaaaTGTGATGTTTCGATTAATTTCAGAATtagaaatatcatga aatatgtaaaactttggaaatatagaaaagtcatatttccatatttacaa aagtatatggaaacatcatattttcaagatatttccatgATTGAAAATCT CATATTTCGCACAGTGAAAATCAGGgttaaaatatttgagacagaGGGGA TTTCCCTGTGAAATTTTAGACACCACAAATGTTTTTGAAGCGCGTTAAAC TAAAGTTGGAAAGTCGAGTTTTTACTccgagttttaacatgagattTAAG ACTAAGGTTCTTAGGATtacaggatttaaaagctcaaaattatttcaata tAATAAGTATAGCCTAAAAGTCACCTAAGCCCTCCAAATCGATATATTCA ATGACATAAAGTAGAAATACTAAAATAACAATTCGCACGAGCTCTAAGTT CTTAATttaacgttaaaatacactgaAATCTCATTATATTTCGACCAAGA ATTTTTAGATATGCAAGGCAGAACCTTTCGAATCCAAAACAATTGTACAA TGGAGTCTTCATAATGTCTCATTAATTTGAATAAGTATTCTTgtcctttc agttaacaatgccttacttcataactcgaaGGTTTCCTGAAGCCAAAAAA AATGTGTTCCCCGTGCGCGTTCAAGTTGCTTATCGATTTGATCGGGCAGG ATCAACTTTTcgaactccagcggcacgtctcCGTCGGCCTCAAGgtcagc cccccccccgggtgacAGATCCTTACGGAAAAAACTGTTAATGATCTTCC TTTAGCCTGTATTCGGGGAGATTTAATTCCCTTTTTTCTGCCCGCAAAAA CAAGCACTACTAGACAACACTGGGTCAAGTAAAAGGACAAGAAAAGTAAC TGAATGAAATATTGAATGGTCAGAGTTATAGAGTGGTAACACACTCTATA ACTAAAATAGATGGGGTACAAAGCCGGCTGTCTGAACTAGAAGTTAGTTG GCAATGTAGGacataacaaaaaaaaacttttcatgaaaataattctttat tgTCCTTTATCTTTATTACTTCAGATCGTGCATTGATGGCAATCACCGAA GATGGTTTAATGCCAATCGTTCAAATCCCTGGATTTGCCGCATGTTCCGT GTTTAAAGATCTGTTAGGTGAGCGTACAACGGAATGCCGTACTTTGGGAG GATGTTCTTTAGTCGGTGACGTCAGAGGAGACGAAAACATAGCTCTGCAT TCCATGCACACTTTATGGATCCGCGAGCATAACAGAATCGCAAAACGACT CCGTAGAATGAATCCTAAGATGGACGATGAAGAAATCTATCAAACTGCTC GTAAGATCGTTGGCGGTATTTGGGCTAACTTGGTTTATGAGGAATATTTA CCAGCATTGGTTCAAGTTTCACCATACCAAAAATATAAGGCCGATGTTGA TCCGTCCATTAGTAATTCATTTGCTGCCGCAGCTTTCCGATACGGTCATA GCTTGGTACCCAACTCTTTCCAACAAAATAATGCAAGCTTTAATCCTGTT AGTGAACCAATCTCCCTACAAAATGCATTCTTCAACCGCGAGCCTGTGAA CTTTCGTGGTATCGAACCAACGTTGTTTGGTATCACTGGCAACCAGTCTA ATGAAGTCGATAATAATTTCGCTAAAGGAATCGCGCGACGATTATTTGTC CGCCCTGGTGAAGGTTTCCATTATGACTTACTAGCCTTGAATGTACAACG TGGCAGAGATCACGGGCTACCAACGTACGGAGCTTACAGAAAATTCTGTG GTCTACCAACATTGAACTCTTGGGCTGATGCTCGATCATGTTTCTTACCC AAAGCTGTTCAAGCTTTCAAGAAGATTTATAAAAGTCCAAATGATATTGA TCTGTTTGCTGCTGGAATTTCCGAAATTCATCTTTCCAATTCAGAACTCG GACCAACATTTAATTGCTTGATCAAAAAGCAATTTGAAGATGTCCGAGAC GGTGATCGATTCTTTTACCGAAACAAAAACGTTTTCACTCGAAATCAACT AAAAGCTATCGAGAAGGTTACTTTTGCAAGTGTTCTGTGTGCGAATCTAA AGAATATTGTATGCATCCAACCCAATGCACTGAGAGTTCCAAACGATGGC TCTAACCGTAGAATCACCTGCGATAGAATTCCAAAACTTAACTTAGGTCC TTGGAGACAGTAAATTATCTTTTTGTCTCGATAATTTGTGTAGACTATGA TATGGGTTTCTCTTATAAATTTTGTTCTGAATTAATTTAGCTATATAAAG TATTTGTAATGTttcattttgatcaaattttaattATGTAAACTTACttt agttttaaaatttcttctatTTATAATTGTGGTCCCAGAGGCCGTTGTCG CACCAAAGATTTGTCACTATTTCATTAGTTTGATCGAAGACAGCAGACGA AACTTATGTGTTAAAAAAGGATAGGTTAAACAGAAAATCTGGCAGTGATA TTTTTCACCACAAAGAATTTGTTTACAGagagcttcaaaataaaataaaa gtaggATTCTCTAGCGatcgtggctagccatcgtgTGTAAACATTTGAGT GTGACTTTActaaaagactttgaaagactttgaaagactttgaaagactt tgaaagactttgaaagactttgaaagactttgaaagactttgaaagactt tgaaagactctgaaagactttgaacagctttggataggttttgaaagcac ccagagcctcttgggaactcgTTTNTCTCTTAAAGCTACCTACAACATCC AGAGGACTAAATTACTGTGTTCAACTATAACTTAAACGACGTGCGATGCC GGGAAGCGGCTAGTTGTTTTATATTTCTAGTTTAATTTACAATCATTAAA TAACtcaatcaataaaaaaatgaaaactctcaaagtctgtaaatttttga aaaaattccctttATTAAAGACGAAGAAGCTGTtctcatagatttataaa tcccgaagggctatatgtcgtgctttaagctctacttccaagcaaaaaaa gtgaatatcgcaaagaATATAGCtcctattgttttcgaaaacccacgaag cttctgattggtcaagttctagaattatattgtaatgtcacgtgacttag gtagtaTTTcccacccctgtgtcacagacccactgggaccccagccccac tggaaatcTCAGCAATAATTtcgtcccggtgggaaaataccctggaattt cagccctacTGGGGAAATGACTTTAATTTTACTCCCCCATTCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071578TCONS_00071578Clytia hemisphaericatranscript
TCONS_00071579TCONS_00071579Clytia hemisphaericatranscript
TCONS_00071580TCONS_00071580Clytia hemisphaericatranscript
TCONS_00071581TCONS_00071581Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071578-proteinTCONS_00071578-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_62supercontigscaffold_62:257127..268521 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.03 0.02 0.07 0.19 0.24 0.24 0.22 0.06 0.2 0.24 0.14 1.84 2.26 8.83 2.45 7.35 6.18 7.21 26.24 7.1 7.79 33.09 42.39 97.24 92.05 1053.39 963.79 19.35 13.08