XLOC_044378 (gene) - C. hemisphaerica

Overview
NameXLOC_044378
Unique NameXLOC_044378
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1602482..1607340-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044378 ID=XLOC_044378|Name=XLOC_044378|organism=Clytia hemisphaerica|type=gene|length=4859bp|location=Sequence derived from alignment at scaffold_60:1602482..1607340- (Clytia hemisphaerica)
ATCACAAACGCTTTATATCTTACTCATCTCAACCGTCATGTTCACAATAT
CTCAAACCAAAACAGTCACTATAACATATAATATCGAACGAACTCAAACT
TATGACGTCATTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGT
AAACACAGAATATCATGACAACCAATGTCGTTGTATGAGGAATCATATGT
TTTTTGTGGTGGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAAAC
CCTCGTACGGGAGTATTTTTTGTTTACTTTGGTCCTTATACCTTGACATT
GTAATGGCTTGTTCAAACAAAACCACAAAATTAAGCCTTCTTGAAAAAAT
AATCTACCCTTAAATATAAAGAAAGTTTGCCGTCTTGAGCATCTCTTTAG
ATATCCTGCAAATATAAATTTGCTATAAACTCAAGAATTAGTAAACAGCT
CGATGTAAATAGAATAGATCCGAAGGCTTTTACAAAACCATCCAATCAGA
TCCATATTTAAAGTCTATCAAGGTTACCATCGATTTCTAGAAAGATGAAA
GTCAAAGCCTCCCTATTTACAACTTTTTTGCCAATGACTGTATTTAACAT
ATTTTTCTATTCTCATCATTAGAATGCAGCTTAATAGACCAGTCATCTTT
CCGTGACCTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTAACGA
GCGGCGATACAACTTTGAATTGCACACAGAAAGTTATCAATTATAATTCA
AATGGGAAATGGATGTACCTGGAGATGCCTTCTTCTATTCTGGTATGTGA
ACCTATTGTTTTGAGAAAGTGTTATCTGTTATAATATTTTTAAAAATCAT
TTCAGCTGTTTCAGCAAAAGAACAGAGATTAAGGTTGACAAAACTATGCT
CACAGACGGTTCTGTTTCCCTCCGAAACGAGATCAATTCCATTCTATTGG
TTAGAAGTGACGTAAAAATTGAATTTAACCAATAGAGTGGCTTCATTTCA
TTTTGGACCCGAAACGTGTGAATATGGTCTTATCTTAAGACATTTGAACC
AAACAGACAAAAGTTAGATCATTTTGTTCTAGACAGAAGGGAAGATGGAA
GGCAAACTTTTAACCATCACTTATGAATGCAACAAAAATGATGACATGAA
CTGTCGTTTGCTCAAATTTCCTGGACATGATCAATGTAAGTTCACTACTG
ATGCTCTTTTGAATGTAAAAATTTTATTTTAATAAGATTTTTCTAATAAT
TTGATAAATGAATGATGGAAAAGTTCTTCCGCCGATGAGCTAAAATCATT
ATTCAGTTCAGTTGGTATTTAATATGAATAAACCAGCCGAGGCTGGAAGG
TCAGCCAATAGAGCTTAGCTAGATAGCTTTAATAAGTGGGTTAACAGATG
TAAGAGATGCACTGAAACAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGATCTGTAAAAACAACGCACGCTAAAAGTACCCAAAAA
GTTAACCCGATCGGAAGAAAGTTTAGAAATCAAAGTGAGATCGGAAAACC
GGATTTTTTTTTTTGCCGTCTTATGATGATGATGGAGGAACTGGAAGAAA
ATTTTACCTATTTGAATGCTCAGCTTAGGCTGACCAATGAATGGAATTTC
ACTAGTATAAAGATAAATTGTCTACCCTTTATGCCGCACCTGAAAAAGTC
ACCCCAATAAATAATATGGCTATTCTTCTAAGAAACTTAAAACAAAATCA
ACCTCCAAATTCAAAAAATCTGAAAATTCTTAACCACCTGGAATCTAGGG
GGAGCCCAAGGCAAGATAACATTTGATGTAATAAAATTTCAATATTTTGA
TTATCTTGCATTTGTAATCATAGACATCCACACGTTCAATCCAACAACAT
CGACAGTAGGAACGAACATATCCATAAAAACAAAAACATCAACAACTATA
ACAACGAAAGAAAAGAAAATACCAAGAAAATATCCAGAATCAAAAAACAA
AAATTCGGGAAGCCATCCTCCAAAAACAACGACCAATAATAAGACCAACG
AACAGAAAGAAACTCGTAAAAAATTGATGATCGCATTAGTCGTATGTGCT
GTCTTACTAGCTGGTGTTGTTATACTGGCTATCATTATGGCCAAGAGGTA
AGCCATCTTTGCTTTTCAATATAAGCAACTCCCAAACAACTCTTTCNGGA
GGTAAGCCATATTTGCTTTTCAATATAAACAACTCTTTCATATTACAAAA
TGACATTAGGCCCCGAATTTAGCTGCAGTCCTAATTACAATAGCAAGTTT
ATGTAAATGTGTTTTTGGACGGAAACGGTTAGCTTTTGATTTGTCTACAT
CCTGACTGACTGAGGACGACGGTAAATCAGCAATTTAAACGTTCTCGATT
TTTCAGGTCAGAACATCATTTTAAAATCGCGCTCCACCGTTCCCAAAAGT
GAATGAAAATACATAAACTCGCTGTTGACAACTCTTTTACTACTGTACAG
TATTAAAGCCTATACACACAATACTAACGTAAACTGGTGAAGGTTTCAAA
TCCATCCCTACATATTCTCATGGTTCTTCTGAAAACGTATTAAAGAAGAC
GTTGTTAAACTTACTGTGAATAACTTCAGTCATGATGAATGAACTTTTAA
TTAACAGTTTTCTTCCTTCTCTTCACTATAGGTATCTGAAAATTAAGAAG
ATGGTAAGAACAATTGATTTGCTTTATTTTGAGCAATTGAAATATTCTTT
TGTATAAATGTAATAAACCAATAAACCAGAGTAAAATCAACTTGAAAAAT
CCTGTACCATAGTCACGAAAAGACAGTCGATAATACTTTTTAAAGGATAC
TAACTGCTGTGGGTTTAAACCGATCGGAGATTGGTAAAGCCTTTTACCTG
TTAGAACTCAATTTTATCTGATTCTCGAGGCTGAAAAAGAAATAAAACAT
ATAAGTGTACATAAATGTTATTCTTCTAGACATCAGATTCAGAAGTTGCG
CGTCTTCATTCACCTCCAAGTGACGAAAACACCAAAACATCACCCAAGAA
GTGAAATGTTAAGAAGCAATATGTAATTATTCAAAAATTTTTGTTGTTGT
TTTTGTTGGTATCATCGCAAAATGTAATGTAAATAGTTATTGAACCAATT
CGTTTTATTTTTTCTGAATTTCATTCATACGTAAATACTTATTTGATAAG
CAATTCGACTAAAACTGCCTTGCATATACCAGACATCATAAATGTTCATG
TTCATTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071477TCONS_00071477Clytia hemisphaericatranscript
TCONS_00071476TCONS_00071476Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071477-proteinTCONS_00071477-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1602482..1607340 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.8	0.77	0.94	1.06	1.61	1.46	2.55	1.66	0.89	0.85	0.24	0.48	5.36	3.8	22.43	8.26	0.92	2.86	1.73	2.96	0.19	0.23	0.68	0.62	0.6	0.39	0.61	0.24	0.45	0.45