TCONS_00071477 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071477
Unique NameTCONS_00071477
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1103

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071477 ID=TCONS_00071477|Name=TCONS_00071477|organism=Clytia hemisphaerica|type=transcript|length=1103bp
ATCACAAACGCTTTATATCTTACTCATCTCAACCGTCATGTTCACAATAT
CTCAAACCAAAACAGTCACTATAACATATAATATCGAACGAACTCAAACT
TATGACGTCATTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGT
AAACACAGAATATCATGACAACCAATGTCGTTGTATGAGGAATCATATGT
TTTTTGTGGTGGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAAAC
CCTCAATGCAGCTTAATAGACCAGTCATCTTTCCGTGACCTTCTCGCACA
AAGAAAACAACAATTTACAAAATCATTAACGAGCGGCGATACAACTTTGA
ATTGCACACAGAAAGTTATCAATTATAATTCAAATGGGAAATGGATGTAC
CTGGAGATGCCTTCTTCTATTCTGACAGAAGGGAAGATGGAAGGCAAACT
TTTAACCATCACTTATGAATGCAACAAAAATGATGACATGAACTGTCGTT
TGCTCAAATTTCCTGGACATGATCAATACATCCACACGTTCAATCCAACA
ACATCGACAGTAGGAACGAACATAtccataaaaacaaaaacatcaacaaC
TATAACaacgaaagaaaagaaaataccaAGAAAATATCCagaatcaaaaa
acaaaaattcggGAAGCCATCCTCCAAAAACAACGACCAATAATAAGACC
AACGAACAGAAAGAAACTCGTAAAAAATTGATGATCGCATTAGTCGTATG
TGCTGTCTTACTAGCTGGTGTTGTTATACTGGCTATCATTATGGCCAAGA
GGTATCTGAAAATTAAGAAGATGACATCAGATTCAGAAGTTGCGCGTCTT
CATTCACCTCCAAGTGACGAAAACACCAAAACATCACCCAAGAAGTGAAA
TGTTAAGAAGCAATATgtaattattcaaaaatttttgttgttgtttttgt
tggtatCATCGCAAAATGTAATGTAAATAGTTATTGAACCAATTcgtttt
attttttctgaatttcattCATACGTAAATACTTATTTGATAAGCAATTC
GACTAAAACTGCCTTGCATATACCAGACATCATAAATGTTCATGTTCATT
TTT
Run BLAST on NCBI

protein sequence of TCONS_00071477-protein

>TCONS_00071477-protein ID=TCONS_00071477-protein|Name=TCONS_00071477-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
SQTLYILLISTVMFTISQTKTVTITYNIERTQTYDVILNVTSVDACAVFV
NTEYHDNQCRCMRNHMFFVVEDKAGCYQAKQINPQCSLIDQSSFRDLLAQ
RKQQFTKSLTSGDTTLNCTQKVINYNSNGKWMYLEMPSSILTEGKMEGKL
LTITYECNKNDDMNCRLLKFPGHDQYIHTFNPTTSTVGTNISIKTKTSTT
ITTKEKKIPRKYPESKNKNSGSHPPKTTTNNKTNEQKETRKKLMIALVVC
AVLLAGVVILAIIMAKRYLKIKKMTSDSEVARLHSPPSDENTKTSPKK
Run BLAST on NCBI

transcript from alignment at scaffold_60:1602482..1607340-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071477 ID=TCONS_00071477|Name=TCONS_00071477|organism=Clytia hemisphaerica|type=transcript|length=4859bp|location=Sequence derived from alignment at scaffold_60:1602482..1607340- (Clytia hemisphaerica)
ATCACAAACGCTTTATATCTTACTCATCTCAACCGTCATGTTCACAATAT CTCAAACCAAAACAGTCACTATAACATATAATATCGAACGAACTCAAACT TATGACGTCATTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGT AAACACAGAATATCATGACAACCAATGTCGTTGTATGAGGAATCATATGT TTTTTGTGGTGGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAAAC CCTCGTACGGGAGTATTTTTTGTTTACTTTGGTCCTTATACCTTGACATT GTAATGGCTTGTTCAAACAAAACCACAAAATTAAGCCTTCTTGAAAAAAT AATCTACCCTTAAATATAAAGAAAGTTTGCCGTCTTGAGCATCTCTTTAG ATATCCTGCAAATATAAATTTGCTATAAACTCAAGAATTAGTAAACAGCT CGATGTAAATAGAATAGATCCGAAGGCTTTTACAAAACCATCCAATCAGA TCCATATTTAAAGTCTATCAAGGTTACCATCGATTTCTAGAAAGATGAAA GTCAAAGCCTCCCTATTTACAACTTTTTTGCCAATGACTGTATTTAACAT ATTTTTCTATTCTCATCATTAGAATGCAGCTTAATAGACCAGTCATCTTT CCGTGACCTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTAACGA GCGGCGATACAACTTTGAATTGCACACAGAAAGTTATCAATTATAATTCA AATGGGAAATGGATGTACCTGGAGATGCCTTCTTCTATTCTGGTATGTGA ACCTATTGTTTTGAGAAAGTGTTATCTGTTATAATATTTTTAAAAATCAT TTCAGCTGTTTCAGCAAAAGAACAGAGATTAAGGTTGACAAAACTATGCT CACAGACGGTTCTGTTTCCCTCCGAAACGAGATCAATTCCATTCTATTGG TTAGAAGTGACGTAAAAATTGAATTTAACCAATAGAGTGGCTTCATTTCA TTTTGGACCCGAAACGTGTGAATATGGTCTTATCTTAAGACATTTGAACC AAACAGACAAAAGTTAGATCATTTTGTTCTAGACAGAAGGGAAGATGGAA GGCAAACTTTTAACCATCACTTATGAATGCAACAAAAATGATGACATGAA CTGTCGTTTGCTCAAATTTCCTGGACATGATCAATGTAAGTTCACTACTG ATGCTCTTTTGAATGTAAAAATTTTATTTTAATAAGATTTTTCTAATAAT TTGATAAATGAATGATGGAAAAGTTCTTCCGCCGATGAGCTAAAATCATT ATTCAGTTCAGTTGGTATTTAATATGAATAAACCAGCCGAGGCTGGAAGG TCAGCCAATAGAGCTTAGCTAGATAGCTTTAATAAGTGGGTTAACAGATG TAAGAGATGCACTGAAACAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTGATCTGTAAAAACAACGCACGCTAAAAGTACCCAAAAA GTTAACCCGATCGGAAGAAAGTTTAGAAATCAAAGTGAGATCGGAAAACC GGATTTTTTTTTTTGCCGTCTTATGATGATGATGGAGGAACTGGAAGAAA ATTTTACCTATTTGAATGCTCAGCTTAGGCTGACCAATGAATGGAATTTC ACTAGTATAAAGATAAATTGTCTACCCTTTATGCCGCACCTGAAAAAGTC ACCCCAATAAATAATATGGCTATTCTTCTAAGAAACTTAAAACAAAATCA ACCTCCAAATTCAAAAAATCTGAAAATTCTTAACCACCTGGAATCTAGGG GGAGCCCAAGGCAAGATAACATTTGATGTAATAAAATTTCAATATTTTGA TTATCTTGCATTTGTAATCATAGACATCCACACGTTCAATCCAACAACAT CGACAGTAGGAACGAACATATCCATAAAAACAAAAACATCAACAACTATA ACAACGAAAGAAAAGAAAATACCAAGAAAATATCCAGAATCAAAAAACAA AAATTCGGGAAGCCATCCTCCAAAAACAACGACCAATAATAAGACCAACG AACAGAAAGAAACTCGTAAAAAATTGATGATCGCATTAGTCGTATGTGCT GTCTTACTAGCTGGTGTTGTTATACTGGCTATCATTATGGCCAAGAGGTA AGCCATCTTTGCTTTTCAATATAAGCAACTCCCAAACAACTCTTTCNGGA GGTAAGCCATATTTGCTTTTCAATATAAACAACTCTTTCATATTACAAAA TGACATTAGGCCCCGAATTTAGCTGCAGTCCTAATTACAATAGCAAGTTT ATGTAAATGTGTTTTTGGACGGAAACGGTTAGCTTTTGATTTGTCTACAT CCTGACTGACTGAGGACGACGGTAAATCAGCAATTTAAACGTTCTCGATT TTTCAGGTCAGAACATCATTTTAAAATCGCGCTCCACCGTTCCCAAAAGT GAATGAAAATACATAAACTCGCTGTTGACAACTCTTTTACTACTGTACAG TATTAAAGCCTATACACACAATACTAACGTAAACTGGTGAAGGTTTCAAA TCCATCCCTACATATTCTCATGGTTCTTCTGAAAACGTATTAAAGAAGAC GTTGTTAAACTTACTGTGAATAACTTCAGTCATGATGAATGAACTTTTAA TTAACAGTTTTCTTCCTTCTCTTCACTATAGGTATCTGAAAATTAAGAAG ATGGTAAGAACAATTGATTTGCTTTATTTTGAGCAATTGAAATATTCTTT TGTATAAATGTAATAAACCAATAAACCAGAGTAAAATCAACTTGAAAAAT CCTGTACCATAGTCACGAAAAGACAGTCGATAATACTTTTTAAAGGATAC TAACTGCTGTGGGTTTAAACCGATCGGAGATTGGTAAAGCCTTTTACCTG TTAGAACTCAATTTTATCTGATTCTCGAGGCTGAAAAAGAAATAAAACAT ATAAGTGTACATAAATGTTATTCTTCTAGACATCAGATTCAGAAGTTGCG CGTCTTCATTCACCTCCAAGTGACGAAAACACCAAAACATCACCCAAGAA GTGAAATGTTAAGAAGCAATATGTAATTATTCAAAAATTTTTGTTGTTGT TTTTGTTGGTATCATCGCAAAATGTAATGTAAATAGTTATTGAACCAATT CGTTTTATTTTTTCTGAATTTCATTCATACGTAAATACTTATTTGATAAG CAATTCGACTAAAACTGCCTTGCATATACCAGACATCATAAATGTTCATG TTCATTTTT

Coding sequence (CDS) from alignment at scaffold_60:1602482..1607340-

>TCONS_00071477 ID=TCONS_00071477|Name=TCONS_00071477|organism=Clytia hemisphaerica|type=CDS|length=5382bp|location=Sequence derived from alignment at scaffold_60:1602482..1607340- (Clytia hemisphaerica)
ACATCAGATTCAGAAGTTGCGCGTCTTCATTCACCTCCAAGTGACGAAAA
CACCAAAACATCACCCAAGAAGTGAGTATCTGAAAATTAAGAAGATGACA
TCCACACGTTCAATCCAACAACATCGACAGTAGGAACGAACATATCCATA
AAAACAAAAACATCAACAACTATAACAACGAAAGAAAAGAAAATACCAAG
AAAATATCCAGAATCAAAAAACAAAAATTCGGGAAGCCATCCTCCAAAAA
CAACGACCAATAATAAGACCAACGAACAGAAAGAAACTCGTAAAAAATTG
ATGATCGCATTAGTCGTATGTGCTGTCTTACTAGCTGGTGTTGTTATACT
GGCTATCATTATGGCCAAGAGACAGAAGGGAAGATGGAAGGCAAACTTTT
AACCATCACTTATGAATGCAACAAAAATGATGACATGAACTGTCGTTTGC
TCAAATTTCCTGGACATGATCAATAATGCAGCTTAATAGACCAGTCATCT
TTCCGTGACCTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTAAC
GAGCGGCGATACAACTTTGAATTGCACACAGAAAGTTATCAATTATAATT
CAAATGGGAAATGGATGTACCTGGAGATGCCTTCTTCTATTCTGTCACAA
ACGCTTTATATCTTACTCATCTCAACCGTCATGTTCACAATATCTCAAAC
CAAAACAGTCACTATAACATATAATATCGAACGAACTCAAACTTATGACG
TCATTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGTAAACACA
GAATATCATGACAACCAATGTCGTTGTATGAGGAATCATATGTTTTTTGT
GGTGGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAAACCCTCACA
TCAGATTCAGAAGTTGCGCGTCTTCATTCACCTCCAAGTGACGAAAACAC
CAAAACATCACCCAAGAAGTGAGTATCTGAAAATTAAGAAGATGACATCC
ACACGTTCAATCCAACAACATCGACAGTAGGAACGAACATATCCATAAAA
ACAAAAACATCAACAACTATAACAACGAAAGAAAAGAAAATACCAAGAAA
ATATCCAGAATCAAAAAACAAAAATTCGGGAAGCCATCCTCCAAAAACAA
CGACCAATAATAAGACCAACGAACAGAAAGAAACTCGTAAAAAATTGATG
ATCGCATTAGTCGTATGTGCTGTCTTACTAGCTGGTGTTGTTATACTGGC
TATCATTATGGCCAAGAGACAGAAGGGAAGATGGAAGGCAAACTTTTAAC
CATCACTTATGAATGCAACAAAAATGATGACATGAACTGTCGTTTGCTCA
AATTTCCTGGACATGATCAATAATGCAGCTTAATAGACCAGTCATCTTTC
CGTGACCTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTAACGAG
CGGCGATACAACTTTGAATTGCACACAGAAAGTTATCAATTATAATTCAA
ATGGGAAATGGATGTACCTGGAGATGCCTTCTTCTATTCTGTCACAAACG
CTTTATATCTTACTCATCTCAACCGTCATGTTCACAATATCTCAAACCAA
AACAGTCACTATAACATATAATATCGAACGAACTCAAACTTATGACGTCA
TTCTCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGTAAACACAGAA
TATCATGACAACCAATGTCGTTGTATGAGGAATCATATGTTTTTTGTGGT
GGAAGATAAAGCAGGATGTTATCAAGCAAAACAAATAAACCCTCACATCA
GATTCAGAAGTTGCGCGTCTTCATTCACCTCCAAGTGACGAAAACACCAA
AACATCACCCAAGAAGTGAGTATCTGAAAATTAAGAAGATGACATCCACA
CGTTCAATCCAACAACATCGACAGTAGGAACGAACATATCCATAAAAACA
AAAACATCAACAACTATAACAACGAAAGAAAAGAAAATACCAAGAAAATA
TCCAGAATCAAAAAACAAAAATTCGGGAAGCCATCCTCCAAAAACAACGA
CCAATAATAAGACCAACGAACAGAAAGAAACTCGTAAAAAATTGATGATC
GCATTAGTCGTATGTGCTGTCTTACTAGCTGGTGTTGTTATACTGGCTAT
CATTATGGCCAAGAGACAGAAGGGAAGATGGAAGGCAAACTTTTAACCAT
CACTTATGAATGCAACAAAAATGATGACATGAACTGTCGTTTGCTCAAAT
TTCCTGGACATGATCAATAATGCAGCTTAATAGACCAGTCATCTTTCCGT
GACCTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTAACGAGCGG
CGATACAACTTTGAATTGCACACAGAAAGTTATCAATTATAATTCAAATG
GGAAATGGATGTACCTGGAGATGCCTTCTTCTATTCTGTCACAAACGCTT
TATATCTTACTCATCTCAACCGTCATGTTCACAATATCTCAAACCAAAAC
AGTCACTATAACATATAATATCGAACGAACTCAAACTTATGACGTCATTC
TCAATGTGACGTCAGTTGACGCCTGCGCTGTATTCGTAAACACAGAATAT
CATGACAACCAATGTCGTTGTATGAGGAATCATATGTTTTTTGTGGTGGA
AGATAAAGCAGGATGTTATCAAGCAAAACAAATAAACCCTCACATCAGAT
TCAGAAGTTGCGCGTCTTCATTCACCTCCAAGTGACGAAAACACCAAAAC
ATCACCCAAGAAGTGAGTATCTGAAAATTAAGAAGATGACATCCACACGT
TCAATCCAACAACATCGACAGTAGGAACGAACATATCCATAAAAACAAAA
ACATCAACAACTATAACAACGAAAGAAAAGAAAATACCAAGAAAATATCC
AGAATCAAAAAACAAAAATTCGGGAAGCCATCCTCCAAAAACAACGACCA
ATAATAAGACCAACGAACAGAAAGAAACTCGTAAAAAATTGATGATCGCA
TTAGTCGTATGTGCTGTCTTACTAGCTGGTGTTGTTATACTGGCTATCAT
TATGGCCAAGAGACAGAAGGGAAGATGGAAGGCAAACTTTTAACCATCAC
TTATGAATGCAACAAAAATGATGACATGAACTGTCGTTTGCTCAAATTTC
CTGGACATGATCAATAATGCAGCTTAATAGACCAGTCATCTTTCCGTGAC
CTTCTCGCACAAAGAAAACAACAATTTACAAAATCATTAACGAGCGGCGA
TACAACTTTGAATTGCACACAGAAAGTTATCAATTATAATTCAAATGGGA
AATGGATGTACCTGGAGATGCCTTCTTCTATTCTGTCACAAACGCTTTAT
ATCTTACTCATCTCAACCGTCATGTTCACAATATCTCAAACCAAAACAGT
CACTATAACATATAATATCGAACGAACTCAAACTTATGACGTCATTCTCA
ATGTGACGTCAGTTGACGCCTGCGCTGTATTCGTAAACACAGAATATCAT
GACAACCAATGTCGTTGTATGAGGAATCATATGTTTTTTGTGGTGGAAGA
TAAAGCAGGATGTTATCAAGCAAAACAAATAAACCCTCACATCAGATTCA
GAAGTTGCGCGTCTTCATTCACCTCCAAGTGACGAAAACACCAAAACATC
ACCCAAGAAGTGAGTATCTGAAAATTAAGAAGATGACATCCACACGTTCA
ATCCAACAACATCGACAGTAGGAACGAACATATCCATAAAAACAAAAACA
TCAACAACTATAACAACGAAAGAAAAGAAAATACCAAGAAAATATCCAGA
ATCAAAAAACAAAAATTCGGGAAGCCATCCTCCAAAAACAACGACCAATA
ATAAGACCAACGAACAGAAAGAAACTCGTAAAAAATTGATGATCGCATTA
GTCGTATGTGCTGTCTTACTAGCTGGTGTTGTTATACTGGCTATCATTAT
GGCCAAGAGACAGAAGGGAAGATGGAAGGCAAACTTTTAACCATCACTTA
TGAATGCAACAAAAATGATGACATGAACTGTCGTTTGCTCAAATTTCCTG
GACATGATCAATAATGCAGCTTAATAGACCAGTCATCTTTCCGTGACCTT
CTCGCACAAAGAAAACAACAATTTACAAAATCATTAACGAGCGGCGATAC
AACTTTGAATTGCACACAGAAAGTTATCAATTATAATTCAAATGGGAAAT
GGATGTACCTGGAGATGCCTTCTTCTATTCTGTCACAAACGCTTTATATC
TTACTCATCTCAACCGTCATGTTCACAATATCTCAAACCAAAACAGTCAC
TATAACATATAATATCGAACGAACTCAAACTTATGACGTCATTCTCAATG
TGACGTCAGTTGACGCCTGCGCTGTATTCGTAAACACAGAATATCATGAC
AACCAATGTCGTTGTATGAGGAATCATATGTTTTTTGTGGTGGAAGATAA
AGCAGGATGTTATCAAGCAAAACAAATAAACCCTCACATCAGATTCAGAA
GTTGCGCGTCTTCATTCACCTCCAAGTGACGAAAACACCAAAACATCACC
CAAGAAGTGAGTATCTGAAAATTAAGAAGATGACATCCACACGTTCAATC
CAACAACATCGACAGTAGGAACGAACATATCCATAAAAACAAAAACATCA
ACAACTATAACAACGAAAGAAAAGAAAATACCAAGAAAATATCCAGAATC
AAAAAACAAAAATTCGGGAAGCCATCCTCCAAAAACAACGACCAATAATA
AGACCAACGAACAGAAAGAAACTCGTAAAAAATTGATGATCGCATTAGTC
GTATGTGCTGTCTTACTAGCTGGTGTTGTTATACTGGCTATCATTATGGC
CAAGAGACAGAAGGGAAGATGGAAGGCAAACTTTTAACCATCACTTATGA
ATGCAACAAAAATGATGACATGAACTGTCGTTTGCTCAAATTTCCTGGAC
ATGATCAATAATGCAGCTTAATAGACCAGTCATCTTTCCGTGACCTTCTC
GCACAAAGAAAACAACAATTTACAAAATCATTAACGAGCGGCGATACAAC
TTTGAATTGCACACAGAAAGTTATCAATTATAATTCAAATGGGAAATGGA
TGTACCTGGAGATGCCTTCTTCTATTCTGTCACAAACGCTTTATATCTTA
CTCATCTCAACCGTCATGTTCACAATATCTCAAACCAAAACAGTCACTAT
AACATATAATATCGAACGAACTCAAACTTATGACGTCATTCTCAATGTGA
CGTCAGTTGACGCCTGCGCTGTATTCGTAAACACAGAATATCATGACAAC
CAATGTCGTTGTATGAGGAATCATATGTTTTTTGTGGTGGAAGATAAAGC
AGGATGTTATCAAGCAAAACAAATAAACCCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044378XLOC_044378Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071477-proteinTCONS_00071477-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071477-exon-scaffold_60-1575043694:1607087..1607340TCONS_00071477-exon-scaffold_60-1575043694:1607087..1607340Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1575043694:1606549..1606718TCONS_00071477-exon-scaffold_60-1575043694:1606549..1606718Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1575043694:1606156..1606258TCONS_00071477-exon-scaffold_60-1575043694:1606156..1606258Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1575043694:1603594..1603867TCONS_00071477-exon-scaffold_60-1575043694:1603594..1603867Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1575043694:1603038..1603059TCONS_00071477-exon-scaffold_60-1575043694:1603038..1603059Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1575043694:1602482..1602761TCONS_00071477-exon-scaffold_60-1575043694:1602482..1602761Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1510915933:1607087..1607340TCONS_00071477-exon-scaffold_60-1510915933:1607087..1607340Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1510915933:1606549..1606718TCONS_00071477-exon-scaffold_60-1510915933:1606549..1606718Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1510915933:1606156..1606258TCONS_00071477-exon-scaffold_60-1510915933:1606156..1606258Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1510915933:1603594..1603867TCONS_00071477-exon-scaffold_60-1510915933:1603594..1603867Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1510915933:1603038..1603059TCONS_00071477-exon-scaffold_60-1510915933:1603038..1603059Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1510915933:1602482..1602761TCONS_00071477-exon-scaffold_60-1510915933:1602482..1602761Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1491911889:1607087..1607340TCONS_00071477-exon-scaffold_60-1491911889:1607087..1607340Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1491911889:1606549..1606718TCONS_00071477-exon-scaffold_60-1491911889:1606549..1606718Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1491911889:1606156..1606258TCONS_00071477-exon-scaffold_60-1491911889:1606156..1606258Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1491911889:1603594..1603867TCONS_00071477-exon-scaffold_60-1491911889:1603594..1603867Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1491911889:1603038..1603059TCONS_00071477-exon-scaffold_60-1491911889:1603038..1603059Clytia hemisphaericaexon
TCONS_00071477-exon-scaffold_60-1491911889:1602482..1602761TCONS_00071477-exon-scaffold_60-1491911889:1602482..1602761Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1602482..1607340 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.796494 0.773968 0.943584 1.05503 1.60549 1.4575 1.76995 1.66326 1.59692e-09 0.848675 0.241233 0.475731 4.99225 3.49801 22.1227 7.72214 0.923516 2.85752 1.7296 2.96497 0.191845 7.58962e-09 0.684172 0.620508 0.596501 8.45261e-09 0.610535 6.32383e-09 7.86741e-09 0.448764
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071477 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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