XLOC_044357 (gene) - C. hemisphaerica

Overview
NameXLOC_044357
Unique NameXLOC_044357
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:989698..994754-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044357 ID=XLOC_044357|Name=XLOC_044357|organism=Clytia hemisphaerica|type=gene|length=5057bp|location=Sequence derived from alignment at scaffold_60:989698..994754- (Clytia hemisphaerica)
TAGATGCACTGGCATATGCAAGTACAAATATTCCTTTGGTACTTCATTTT TCTACCTTACTTCACTGCTCAATGATGTTTTATCGATTGTATTTATTCCC TTTTATTTACTTCCTTTTAATATCTTATATAATTTAGAAAATTACAAAAC AAAAATGGTGAAGCTTTTTGCTATTGAACTATTTTACAAATCAGGAAAAG TCAAGGAGTTGAAATCAGCTCATGATCTGCAATCATTTGGATATTTTCAA AGAAGCAGGTAGAAAGTCGTAGTTTTTTTCAAAAATATTGGGGTTTCTCA AAGCAATGGTAAAAAAGTAAAATTTTATGTTCGTTTTTATATCATAGCGT CAGCCTGGGTTTAGGTCCCACTCTCAGGCAAAAATTAGGTCCCCCCAAAG ATTTATGAATTTTTTGTTTGCCCCCAGGACCTTTGACCCTAGACACTTTC AAAAAATTGTTCCAGTAAAAAAGGGTATTCCAATGTAAATTGCGTTCAGT TCTAAGTTTAAGATAAAATATTTTACACACTTTTTATTAAAATATTGCGC GGCAGGCGAAAATTTTCCAGATTCACGTGCTGAATTATTTTAGCCCTCAC GTTAAGTGATGAGATTTTAGCTCCCCCAAATTACATAGGTCCACCCAAAA AAGTGGTGTACTTCCAGCCCCCTCCTTTTTTGGGAAAACTTTTGGGTGTA CCCCCCCCCAACTAGCAGGGGGGCTGACGCTCTGTATATGTTCACCTCTT TTGCATTCATTCATTCTTAAAAGATATTTCTATTTTTTTTCATCCCCCTA CCAGTGTACGAGAATTCATGGATTTTACTGGCAAAATTATTGTTGAAAGA ACATCAGCTGGACAAAGAGCTTCAGTTTCAGAACAAGGTAAACTATACAA TTGTGTACCCTTTTAAGGTTTTAAATTTTTTAAGATTTTTAGCTTTTTTA AGAAAATGAGGGCTTCTAATATTTAGTTATCACAAGAAACTATATTGAAA GCAATTCTCATTCAAAGGTAAAAAGTTTAGGCAATGCGCCCCAAATTTCT AAGTTTCTTTAACTTAAGAACTGAGATTCTTCGCTTTCAAAAGGTTACCA AACTCATTTTGCTGGGTCTTTACATTGAGTGGCTTTTAAGAAAGTTTGGT ATCCCTCTTTTATACTTAAAGCGTTATTTTCTAACCCAGATTAAATGATA AAAGGTCAGACTTTTGGGAAAGGGTTGCATTTTGCAGTAACAGGGTCAGT CATAAGGAGTGATTGATAAATTCTTGTTTCTTGTATGTTTCAGAATACTT GTGTCATGTGTTTGTCGGAGGAGATGGTTTAAGTGGCGTGGCTATCACAG ATAAAGAATACAATCAAAGAGTGGCATTCAATATGTTAAATAAAGTATAC ATAATTCGCTAAATTTTGGAGATAATAATCCGCATTTCTGTATATTGTGA GGTATGAGATTCGAAGATAAGACATTTCATTTACAGTATTTTCAGAAATA TTAGTTTTTTTGTTTGGACTTTCGAATTCTTTTTTTACAGAATACAGTTT ACAATTATTTCACTGATAATGCTCTTTTTCCTAAATTTTCAGATTTTAGA AGAATTCAAAAAACAAGTACCTTCTGCACAATATATGAACCAAGACCCAA GGTTTGAATTCTGTACATTCTAACAAGTTATATTTCAACGAGTGAATATA CTAGACTATTCCTTATATTCGTTTACCTGTAACATCAAATTCTCTTGATT TTCTCACTCGTCAACGTTCAATGGCATAAAAATCTATTATTATTTCTATT TGTTTCTTTAGCACGTATAATTTCACACTATGCCAATCATATCTCGAAAA ATATCAGGTGAGGTTATTTTTCTATTGAGCTGAATACCATGTCCTTTTTC GAAAAAATCGTTATTGAATTTGGACTGATGGATTCCATTGTCGATTGTCG ACTGGTTTACATTATTCGATTGTATAAATTCGATTGAGATAAATTTCTGT TGAGCTTATAAAGTACCTGACTTTTTCTGAAATTTCTTTAATTGGAGATT TAACACAAGAAAATTATTTCCGCTTTTGCCTATGATATTTTATGCAAAAA ATCAATTTTGAAAGATCAATGGTTTTCCTGGAATCCTCATTATTTTTTAT GGAAACTTTTTTCTCAGAATCCAAGCGAAGCAGATCCAATGATGAAAGTA CAAAGTGAACTGGACGACACAAAAATTATCATGGTATGGTTCACTTCACT ATGGTTTAAAAAAGATTTTATCTTTACATAAGTGTTTCCGTTTCATATCA GACACATATTTCATATCAGGACAGTGTCTTGCTATTGTTATATTATGCTG ATATATAAGGGAAAAAATGTTTTTCTTTTTCTCTTTCTGACCAATCTTGC TCCACATACGTGTCAATCCAATGTGAAAAAGCTTGTGAATTAAAATCGAT GAGTGATCCCAATCAAAAATAAACACCTGTTTTGTGACATTTTTACTGTC AGCCACTAAATTGACCATAACTTGGAGAAATTATGTGGCTTACACTTAGG ATTGTTTGATGGTTAAGCTGAGGAAATTAGCTATCCATTGCATAAAGGGC GAATTTTTGTGGCTTACTTAAAGGGGAGTTGCAAGCAAATGAAGTGTGGG CAAAAAATGTGGCTTACTGGTCATGTGGCTTACCCTACCAAGAAATTTTA AAGGCTCAGTTCTCAATAATGGAAACAGTCAGAAATATACTTTCTTTGCC AGCAAAGGGCTAATTTTTTCATTAGCTGCACTGATTTGTGGCTTACAGTT TGTTAAGTTGGCAAAAATGTGGTTTACACAAGGGAAATAGAGGTGAATAG GTGAATATGTAAAATATAGGTGAAATTTTATGTCTCACATTTTTTAAGTT TTTGGCACTCAATCATTAAAGTATAACACCAGTAGGTGCAAAAAATTACA AAAATTTTGTTGTAAGTACAATTTTGTGGTCACATTAAAAATTATGGGAA AGTAAGCCACCAAAAAGTACATTTAAAAGCTAGAAAGTAGCACATTTAAC ATTTTTAATTCAACCTTTCCTCTGTCAAGGTAATAAAGTCCCATTCTAAG ATCTTTTATCTAATTTGTGTGGCTTACATTTCTAAAAAAGATACAAATTT TGATTTGAAGCCACATTTTTAGCCCAATTAACGGAAAAAATTATTCATAA TGTCTTAGTATTTCCCACAACATTGTAAAATTTCAAGACTTATCGATTAA GACTTCATCATCTATGACAAAAAGTTGTTTTTTGGGAATTTTTCAAAATG TCACACTATTTTTTATTGGGATCTAGTAAGCAAACTATATCACTCTTATT TAAAAACAAAACCTTTAAGGGGTAGGGTAGTCACCAACTGTGACAGGTAG CACGTGATTCTTTGTCCATGACTTTCCAAAGGTATATTGTAGGAAATCTC TTTCTCCCTTGAAATTTGATCTTTACTTTACCTTTCCTTATTTTTGTTTG CTGAGGTAGAGTTCTTTAATCGGGTGAAAGTGCCATCCCATAATTCCTTG GTAAGATTGGCGAAGGATTTTTAACCCCACGATCTGCTCTTAAGACTATG AGCGCTTTTGTATAATTTGAAAGCGATTGCTTTGTTTGTCCTGTTGTCGC TTTTTGTAACATATTTACATTTTTCATTGATTTTAAGTACGAAACGATAG AAAAAGTGTTACAGAGAGGGGAGAAGATTGACGATTTGGTTGCAAAATCT GAAGGACTCAGTATGGGCTCCAAGACATTCTACAAAACGGTAATACATAC TGAACTCCATTTTAATCTCCGTAATTCAAGATGGTAATATAATAAATGCG ATTTCAAAATCTAGCTTTTAGCGATACTCTTATTCCTTGCTATAATATTT TTTCCCCAACGAAGAGCGGTCCTTAATTTATGTTACAAATATTTTGTAAG TGTTGTTCATATAAAAAAAGTCCCTTGTTGATTACACCAAGTAGAAAAAA TTTTTAAGTTTTTTTAAACACTTCTAATAGTTTAAACATACTAGAATAAC GGCTAGTATCCATAAAGATTTCAAAAGCGGGATATATCGTATCCGATAAC GTAACCGCTGCCTAACCTCGACCGGGCAAAGAAAAATTCTTCAAAGATTC GAGTTAAGACCTTTAGACCTCAATTTAAAAAAAATTACTTTTTTAATGAA TTTTGAGAAAATTTACTCATTCTATCTAAAATTTCATTAATACAATTTGA GAAGTCAAAAATTATTACCCCCAAATATGACCAGATCTTCAAACAAGAAG AGGTTTGAAAGTGTATATCTGTTTCCGTACCCCCGTCTTCAAAGCAGAGA AAGGCTAGGATTGCCGATCCCAGCTAAAACCCTATACAGACGGCGCTATA TCATTTAGGTACGCTTTCAGATACGATATAACCTTCTCTTTTCAAAAGGC AAACTTAAGATAACTTAGAAACAAATTTATCATTGGGTTTATTTCATTTT TCAGGCAAAAAAGACAAACGCTTGTTGCAGCTGGTAGACATGGAATTACG GTTAAATTTGGATCGGTGCAAATTTTAGGCTCTTCTTTTTGTTAGAACAT CAAAAGCTGAATTTTATATTGAGATAAGGATTTGAAAAAAGAATACGAAA AAAAAAATTATCATGGATTCTCGTGCCTTTTTTGCTAAAGCCTGATTCAA GATTCTTTCACAAGGTAATTTAGAAACCATACCCGAAATCGGGATAAATT ATGTTGATTTTTTGTCCATTTGGTTAGTTTAATATCAGCATCAAAACAGA AAATTCTTCTTTTTCTAGAAATCATAAACGTAAAGAAAATATTGATTTAT TTATCGTTTATTTTTTATGTTTGAAATTTTTATTCTTCAATATTTTTATG TTAAAATAGCGATAAATTTTTGGTAATTTGTTTTGGGCACCCTACCCAAA TAGTAATATAAATTTTGATAGACGAGCTAAGACTCCTGTCGTCCCAAATA AATCAAAATGTAAAAAAATAGCTGCAAGGTTCACTTTAGGCTCACTTAAG CTTTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071380TCONS_00071380Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071380-proteinTCONS_00071380-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:989698..994754 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
YKT6synaptobrevin homolog YKT6 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
91.22 88.34 19.95 15.92 52.59 39.41 85.41 92.18 62.95 68.99 57.09 38.82 30.52 29.15 35.69 34.83 44.46 37.45 21.83 35.89 33.56 32.51 59 56.64 36.87 47.93 65.18 54.03 76.49 63.99