XLOC_044229 (gene) - C. hemisphaerica

Overview
NameXLOC_044229
Unique NameXLOC_044229
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_6:69787..73586-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044229 ID=XLOC_044229|Name=XLOC_044229|organism=Clytia hemisphaerica|type=gene|length=3800bp|location=Sequence derived from alignment at scaffold_6:69787..73586- (Clytia hemisphaerica)
AAAATACAATATTATATTTCTTTGGTTTACTGACTCTCTACAAAATCTGT
TTTTCCCTTTTTCTAAACATAGAGAGGGAAGCATTTTAAGCTTTAAAGCG
GCGCATCAAGGTACCGCGAAAGCTGCCTTCAAGAATTCCTTCCTTTGATT
TGCAAACTGATTTACAGATTGCAAAACGAAAGATTTCCGACGTTCAAGAA
GTTTGATATAAACGATGCTGAAAGTGTGTAAACAATGGAAACGCTTTGGT
GAACGCAATAATAAACTTTTAGAAGTAATTTATCCTATTAATGGGGCGTT
CCATTTAAACCAAATACGCCAGAAAGAAGATGGGACAAAATGGTAGGGTT
AAAGTACAGATGAATTGTATCAGCATTGGACAATGAAATATGAAAATAGA
TGACTAAAATTGATAAAAATTGCTATAAGTATAAAAATATGTTGAATTAT
ATTGAAGTTCTTTGAAATTTTGTTTCGTTTAGCATTAAAATTTCGATTTT
TTTATATTATAGCTTATAAGCTTCTCAAAGCTAAAAAAACCTCAATCCAA
GCTAGGCTGAAAGGATTCTTCTATATTTCAGCTCAATCTAAGATGTGGTG
GTTTGCCTTGGTGTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATG
GTAAGATCTTCTTGTTTAAAAAAATTAGCTGTTGGATATTTGCATATTAG
CATATCATAAAATTCCAAATTAAAGTATTCAGCCTTGTCACATTCTGTAC
AAGTACTACAATCCCGGTCATAATATTTAAGAAAAAAAGGGAAATTCCCA
CGAAATCTCATAGCCACAAACGATTTGGAAGCGCTTTAACTTACTTAGGA
TCTGAGGATCCAAAAGTTCAAGAATGGTCCAAAAGGGCTGCGAATATAGC
CTGGAAGTCTATAAACCCCACTCAATTTGCAATATTCGATTAAATTTAAC
AATGAAATAGCCCAAAAGCGACTTTCTCGCCCGAACTTTAATATGCTAAA
AACGAGGAATTAGCCAAATTTATCAATATATTTTGATATTGTAGGTTTTT
ATTAATAATTGGGGAACATCCTACACTGTCGAATTAAACATCTACTCATA
ATACACCACATTTTACACCTCCTTCTCGGTGGAACCAATTCAGCCAGTAG
GGGTAAAAATAACGGACCAAAACTCGATGGGGATTAATATTCTCATTTTC
TTATGGTTGGGGATTTGAATTCTATTGTTTTTGAGCCAGAAAATCCAGTG
GGGATGGAAAAAGTAGCACAATATTTTGCAGTGACGATTTAATTATCTGA
TTATTTTCAGCGAAGGCAAGAGTTAAAATATAATTTTCTACTGGGTACGA
TATTTTGGCCAATTTTTCCAATGAGTCTCATCGGGTATGTGAGAAGGGGG
TATCATTAAAATGTGTTCACACCACGTTAAATTCGTAGTCTGATTGTGTA
TGTAACGGTGGACGTTATGGCCCTATGACTAACCATATATCTATAACCAG
ATATCCAAGCCTTGTCTTTCATCTAACTACAGCTTCAAGGAGTGCCTAAA
GAATTTTCATATTCAAGGCCATTCTTCACAGTGGCTTTTTGATGCATTAA
ACTGTCTCGTTTCAATGTTTTGTATTCTTATTTTTAAATTTCTTTCGTGA
TCCTGAAAATAGAAAAGTAAGTTAAAATATACCGTAATCAAAATCTGGGA
AAGTTTGATTAGCTCTTGATCTATTGCTAGGGGCTCATCTAAAGAACATC
CCCACCCCTTTACGAATATAATTTATTTCACTTTTTTAAAACTCGATCAT
CAATCGGCTGAAATCTAAAAACTCGTAGCATCAAAAGCTTTACGTTTTTA
TTGTAATATTTACATAATCTATGTTTAGCTGCCAAGAAATCACTACACCG
AAGATTAAGTGATTATCCTGTACTCAAACGTTGGGAGATACCAATCAAAG
CTAACGTCGTTGGTCGAAGAAACAAAGACTTATGGGGAGACTCGAAAAAG
AAACGTTCATTTTGGGAGGCAAAGCCCCAGTTTACACTACATGAGCTTGA
AATGGAAAACGATCCAGAGAAGATATATATGGATTTACACTATTCAAGAA
ATATGCTTGAAGACGATTCTGACGCAGATAAAAGTATTGCACAATATAAG
AAAGATACATTGGAGTCGCCACCGTTGTTAAAGACTTCTGCGAAGAAGGC
AGAGGTTAAAAAGAAAGATGGTAAAAAGTTACTCCAACAAAAAGTAACAA
AACATAAGGAAGCAGACAAGAAAAGATTAATTGCATTAAAACCTTTCTTG
TCAGCCAAACACGTGACAACATCAACGAAAAAGAAGAAGAAAAAGAGAAG
CAGAAGATCATTGGAGGATGAGGAGTTTGAAGAAATTAATACTGATGATG
GAGACTTTTCAATGGCGGGTTTCCAAGATGGTTTGATAGATGAAAGAGAA
GATGCAGAGAGAGTCAAACGTGATTCTGAATCAATCGCTAACTTCTATTT
TGACCAATACGATGATGATGGTGTTGATGGTAACGAAGCTGAAACTTACA
GTAAAAATAATGGTAATAATGTTGATGATGATACCCCTTCTCAAGATCGA
CAAAAAAGATCCATTGTTAACAAACCTAAAGATCATAAACTTGCCGTTGA
TAATTTGAAACGATCACGTACAGAAAATATTGCAAAACTGTTTCATAAAT
CAGTAGCAAAGACACATTCTGCCATCGATGCTTCAGCCAAACGATCAAGT
TTGTCTTCTAATATTGTTACTTCCAAGGCTGTTAGTAAAACTGACGGTGA
TTCTGCTGAGCAAAGAAAAGCTAAAGCTTTGATTCAAAAGGCATTTTTCA
GTTCAAAACATGGGCACTTGGTACCAAAAACCTCCGTTCGTCATATAATT
CCACAAAGCTCANAAACATGGGCACTTAGTACCAAAAACCTCCGTTCGTC
ATATAATCCCAGAAAGCTCGACAACAATAAAGAAGATAGTCCCTAATGTT
GATGTTAAAGTTATATCAAAGAATCTTCTAGAACAAGATATTGGAGCTGT
ACCAGGTCTTAAAAAAGATGAAAATTCAGTAAGCAGGCAACATATAGCAC
ATCCAGAAAAATCAACGGATAGTATAAACACAGCAAATGTTGCACGTGCA
GTTGCAGTGGCAATGGAACAATTAAAAAGAGATAAAATGTGGGGCAAAGT
ATTTGTCCATGTTAGACCAAGTGGTGAACTTAAGGTTATGGTACAAGAAA
CTAAAAAGATGGAAGAAGAGACTTGAAACTATATTGATATCTTGAATAAA
TAATCTTTTGTACATTTGTATTAAACGTTTTTACTTTTCTAGAATTTTAC
AGTGGGGATTAAGATTTCTATCGAAACCCTAACGAGCGAGGATAAAACTC
TTTTGTTCCGAGCTCAAAATGTCCAGTGGAGATGGATTTGGAGTGCAAGT
TCTTTTCATCAATTTTTGAATGAGGATGCAATCAAAATGAATTTCCCAGT
GGACCTCAAATTGTAGAAAGCTCTTTCCAACTGGGGATGAAATTCTAACC
AAATCTCCCGATGCGCTTGGGGTTCCCACCGGGTTCGTGACAAAGGGTTT
TTTCTAGATATGACAGTAATAACCAGTAGTGAAGGCATTAAATTAATTTT
GTTATCTTTAAATTTTTTAGACCTAGTTCTTATAGTAATATATTGAAAAT
AAAACTTACGAATACTTTTTTTAAATGCACCTTTAACAAGTTTATAGAAA
TCAAGTAAGGATTAATCATTGTTATTAATATTCCAAGGGTTCCAAAATCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071159TCONS_00071159Clytia hemisphaericatranscript
TCONS_00071158TCONS_00071158Clytia hemisphaericatranscript
TCONS_00071157TCONS_00071157Clytia hemisphaericatranscript
TCONS_00071156TCONS_00071156Clytia hemisphaericatranscript
TCONS_00071155TCONS_00071155Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071156-proteinTCONS_00071156-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:69787..73586 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.96	1.59	1.08	1.07	0.1	0.11	11.72	12.66	6.1	4.94	5.24	5.91	14.98	9.78	9.03	23.16	13.44	14.23	0.54	0.61	11.82	9.15	7.03	7.38	10.77	13.63	2.02	1.09	0.32	0.23