TCONS_00071156 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071156
Unique NameTCONS_00071156
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1964

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071156 ID=TCONS_00071156|Name=TCONS_00071156|organism=Clytia hemisphaerica|type=transcript|length=1964bp
CCATTTAAACCAAATACGCCAGAAAGAAGATGGGACAAAATGATGTGGTG
GTTTGCCTTGGTGTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATG
CTGCCAAGAAATCACTACACCGAAGATTAAGTGATTATCCTGTACTCAAA
CGTTGGGAGATACCAATCAAAGCTAACGTCGTTGGTCGAAGAAACAAAGA
CTTATGGGGAGACTCGAAAAAGAAACGTTCATTTTGGGAGGCAAAGCCCC
AGTTTACACTACATGAGCTTGAAATGGAAAACGATCCAGAGAAGATATAT
ATGGATTTACACTATTCAAGAAATATGCTTGAAGACGATTCTGACGCAGA
TAAAAGTATTGCACAATATAAGAAAGATACATTGGAGTCGCCACCGTTGT
TAAAGACTTCTGCGAAGAAGGCAGAGGTTAAAAAGAAAGATGGTAAAAAG
TTACTCCAACAAAAAGTAACAAAACATAAGGAAGCAGACAAGAAAAGATT
AATTGCATTAAAACCTTTCTTGTCAGCCAAACACGTGACAACATCaacga
aaaagaagaagaaaaagagaagCAGAAGATCATTGGAGGATGAGGAGTTT
GAAGAAATTAATACTGATGATGGAGACTTTTCAATGGCGGGTTTCCAAGA
TGGTTTGATAGATGAAAGAGAAGATGCAGAGAGAGTCAAACGTGATTCTG
AATCAATCGCTAACTTCTATTTTGACCAATACGATGATGATGGTGTTGAT
GGTAACGAAGCTGAAACTTACAGTAAAAATAATGGTAATAATGTTGATGA
TGATACCCCTTCTCAAGATCGACAAAAAAGATCCATTGTTAACAAACCTA
AAGATCATAAACTTGCCGTTGATAATTTGAAACGATCACGTACAGAAAAT
ATTGCAAAACTGTTTCATAAATCAGTAGCAAAGACACATTCTGCCATCGA
TGCTTCAGCCAAACGATCAAGTTTGTCTTCTAATATTGTTACTTCCAAGG
CTGTTAGTAAAACTGACGGTGATTCTGCTGAGCAAAGAAAAGCTAAAGCT
TTGATTCAAAAGGCATTTTTCAGTTCAAAACATGGGCACTTAGTACCAAA
AACCTCCGTTCGTCATATAATCCCAGAAAGCTCGACAACAATAAAGAAGA
TAGTCCCTAATGTTGATGTTAAAGTTATATCAAAGAATCTTCTAGAACAA
GATATTGGAGCTGTACCAGGTcttaaaaaagatgaaaattcagTAAGCAG
GCAACATATAGCACATCCAGAAAAATCAACGGATAGTATAAACACAGCAA
ATGTTGCACGTGCAGTTGCAGTGGCAATGGAACAATTAAAAAGAGATAAA
ATGTGGGGCAAAGTATTTGTCCATGTTAGACCAAGTGGTGAACTTAAGGT
TATGGTACAAGAAACTAAAAAGATGGAAGAAGAGACTTGAAACTATATTG
ATATCTTGAATAAATAATCTTTTGTACATTTGTATTAAACGTTTTTACTT
TTCTAGAATTTTACAGTGGGGATTAAGATTTCTATCGAAACCCTAACGAG
CGAGGATAAAACTCTTTTGTTCCGAGCTCAAAATGTCCAGTGGAGATGGA
TTTGGAGTGCAAGttcttttcatcaatttttgaatgaggatgcaatcaaa
atgaatttccCAGTGGACCTCAAATTGTAGAAAGCTCTTTCCAACTGGGG
ATGAAATTCTAACCAAATCTCCCGATGCGCTTGGGGTTCCCACCGGGTTC
GTGACAAAGGGTTTTTTCTAGATATGACAGTAATAACCAGTAGTGAAGGC
attaaattaattttgttatctttaaattttttagacCTAGTTCTTATAGt
aatatattgaaaataaaacttacgaatactttttttaaatgcacCTTTAA
CAAGTTTATAGAAATCAAGTAAGGATTAATCATTGTTATTAATATTCCAA
GGGTTCCAAAATCc
Run BLAST on NCBI

protein sequence of TCONS_00071156-protein

>TCONS_00071156-protein ID=TCONS_00071156-protein|Name=TCONS_00071156-protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
PFKPNTPERRWDKMMWWFALVLLIHGSHGDAQHAAKKSLHRRLSDYPVLK
RWEIPIKANVVGRRNKDLWGDSKKKRSFWEAKPQFTLHELEMENDPEKIY
MDLHYSRNMLEDDSDADKSIAQYKKDTLESPPLLKTSAKKAEVKKKDGKK
LLQQKVTKHKEADKKRLIALKPFLSAKHVTTSTKKKKKKRSRRSLEDEEF
EEINTDDGDFSMAGFQDGLIDEREDAERVKRDSESIANFYFDQYDDDGVD
GNEAETYSKNNGNNVDDDTPSQDRQKRSIVNKPKDHKLAVDNLKRSRTEN
IAKLFHKSVAKTHSAIDASAKRSSLSSNIVTSKAVSKTDGDSAEQRKAKA
LIQKAFFSSKHGHLVPKTSVRHIIPESSTTIKKIVPNVDVKVISKNLLEQ
DIGAVPGLKKDENSVSRQHIAHPEKSTDSINTANVARAVAVAMEQLKRDK
MWGKVFVHVRPSGELKVMVQETKKMEEET
Run BLAST on NCBI

transcript from alignment at scaffold_6:69787..73286-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071156 ID=TCONS_00071156|Name=TCONS_00071156|organism=Clytia hemisphaerica|type=transcript|length=3500bp|location=Sequence derived from alignment at scaffold_6:69787..73286- (Clytia hemisphaerica)
CCATTTAAACCAAATACGCCAGAAAGAAGATGGGACAAAATGGTAGGGTT AAAGTACAGATGAATTGTATCAGCATTGGACAATGAAATATGAAAATAGA TGACTAAAATTGATAAAAATTGCTATAAGTATAAAAATATGTTGAATTAT ATTGAAGTTCTTTGAAATTTTGTTTCGTTTAGCATTAAAATTTCGATTTT TTTATATTATAGCTTATAAGCTTCTCAAAGCTAAAAAAACCTCAATCCAA GCTAGGCTGAAAGGATTCTTCTATATTTCAGCTCAATCTAAGATGTGGTG GTTTGCCTTGGTGTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATG GTAAGATCTTCTTGTTTAAAAAAATTAGCTGTTGGATATTTGCATATTAG CATATCATAAAATTCCAAATTAAAGTATTCAGCCTTGTCACATTCTGTAC AAGTACTACAATCCCGGTCATAATATTTAAGAAAAAAAGGGAAATTCCCA CGAAATCTCATAGCCACAAACGATTTGGAAGCGCTTTAACTTACTTAGGA TCTGAGGATCCAAAAGTTCAAGAATGGTCCAAAAGGGCTGCGAATATAGC CTGGAAGTCTATAAACCCCACTCAATTTGCAATATTCGATTAAATTTAAC AATGAAATAGCCCAAAAGCGACTTTCTCGCCCGAACTTTAATATGCTAAA AACGAGGAATTAGCCAAATTTATCAATATATTTTGATATTGTAGGTTTTT ATTAATAATTGGGGAACATCCTACACTGTCGAATTAAACATCTACTCATA ATACACCACATTTTACACCTCCTTCTCGGTGGAACCAATTCAGCCAGTAG GGGTAAAAATAACGGACCAAAACTCGATGGGGATTAATATTCTCATTTTC TTATGGTTGGGGATTTGAATTCTATTGTTTTTGAGCCAGAAAATCCAGTG GGGATGGAAAAAGTAGCACAATATTTTGCAGTGACGATTTAATTATCTGA TTATTTTCAGCGAAGGCAAGAGTTAAAATATAATTTTCTACTGGGTACGA TATTTTGGCCAATTTTTCCAATGAGTCTCATCGGGTATGTGAGAAGGGGG TATCATTAAAATGTGTTCACACCACGTTAAATTCGTAGTCTGATTGTGTA TGTAACGGTGGACGTTATGGCCCTATGACTAACCATATATCTATAACCAG ATATCCAAGCCTTGTCTTTCATCTAACTACAGCTTCAAGGAGTGCCTAAA GAATTTTCATATTCAAGGCCATTCTTCACAGTGGCTTTTTGATGCATTAA ACTGTCTCGTTTCAATGTTTTGTATTCTTATTTTTAAATTTCTTTCGTGA TCCTGAAAATAGAAAAGTAAGTTAAAATATACCGTAATCAAAATCTGGGA AAGTTTGATTAGCTCTTGATCTATTGCTAGGGGCTCATCTAAAGAACATC CCCACCCCTTTACGAATATAATTTATTTCACTTTTTTAAAACTCGATCAT CAATCGGCTGAAATCTAAAAACTCGTAGCATCAAAAGCTTTACGTTTTTA TTGTAATATTTACATAATCTATGTTTAGCTGCCAAGAAATCACTACACCG AAGATTAAGTGATTATCCTGTACTCAAACGTTGGGAGATACCAATCAAAG CTAACGTCGTTGGTCGAAGAAACAAAGACTTATGGGGAGACTCGAAAAAG AAACGTTCATTTTGGGAGGCAAAGCCCCAGTTTACACTACATGAGCTTGA AATGGAAAACGATCCAGAGAAGATATATATGGATTTACACTATTCAAGAA ATATGCTTGAAGACGATTCTGACGCAGATAAAAGTATTGCACAATATAAG AAAGATACATTGGAGTCGCCACCGTTGTTAAAGACTTCTGCGAAGAAGGC AGAGGTTAAAAAGAAAGATGGTAAAAAGTTACTCCAACAAAAAGTAACAA AACATAAGGAAGCAGACAAGAAAAGATTAATTGCATTAAAACCTTTCTTG TCAGCCAAACACGTGACAACATCAACGAAAAAGAAGAAGAAAAAGAGAAG CAGAAGATCATTGGAGGATGAGGAGTTTGAAGAAATTAATACTGATGATG GAGACTTTTCAATGGCGGGTTTCCAAGATGGTTTGATAGATGAAAGAGAA GATGCAGAGAGAGTCAAACGTGATTCTGAATCAATCGCTAACTTCTATTT TGACCAATACGATGATGATGGTGTTGATGGTAACGAAGCTGAAACTTACA GTAAAAATAATGGTAATAATGTTGATGATGATACCCCTTCTCAAGATCGA CAAAAAAGATCCATTGTTAACAAACCTAAAGATCATAAACTTGCCGTTGA TAATTTGAAACGATCACGTACAGAAAATATTGCAAAACTGTTTCATAAAT CAGTAGCAAAGACACATTCTGCCATCGATGCTTCAGCCAAACGATCAAGT TTGTCTTCTAATATTGTTACTTCCAAGGCTGTTAGTAAAACTGACGGTGA TTCTGCTGAGCAAAGAAAAGCTAAAGCTTTGATTCAAAAGGCATTTTTCA GTTCAAAACATGGGCACTTGGTACCAAAAACCTCCGTTCGTCATATAATT CCACAAAGCTCANAAACATGGGCACTTAGTACCAAAAACCTCCGTTCGTC ATATAATCCCAGAAAGCTCGACAACAATAAAGAAGATAGTCCCTAATGTT GATGTTAAAGTTATATCAAAGAATCTTCTAGAACAAGATATTGGAGCTGT ACCAGGTCTTAAAAAAGATGAAAATTCAGTAAGCAGGCAACATATAGCAC ATCCAGAAAAATCAACGGATAGTATAAACACAGCAAATGTTGCACGTGCA GTTGCAGTGGCAATGGAACAATTAAAAAGAGATAAAATGTGGGGCAAAGT ATTTGTCCATGTTAGACCAAGTGGTGAACTTAAGGTTATGGTACAAGAAA CTAAAAAGATGGAAGAAGAGACTTGAAACTATATTGATATCTTGAATAAA TAATCTTTTGTACATTTGTATTAAACGTTTTTACTTTTCTAGAATTTTAC AGTGGGGATTAAGATTTCTATCGAAACCCTAACGAGCGAGGATAAAACTC TTTTGTTCCGAGCTCAAAATGTCCAGTGGAGATGGATTTGGAGTGCAAGT TCTTTTCATCAATTTTTGAATGAGGATGCAATCAAAATGAATTTCCCAGT GGACCTCAAATTGTAGAAAGCTCTTTCCAACTGGGGATGAAATTCTAACC AAATCTCCCGATGCGCTTGGGGTTCCCACCGGGTTCGTGACAAAGGGTTT TTTCTAGATATGACAGTAATAACCAGTAGTGAAGGCATTAAATTAATTTT GTTATCTTTAAATTTTTTAGACCTAGTTCTTATAGTAATATATTGAAAAT AAAACTTACGAATACTTTTTTTAAATGCACCTTTAACAAGTTTATAGAAA TCAAGTAAGGATTAATCATTGTTATTAATATTCCAAGGGTTCCAAAATCC

Coding sequence (CDS) from alignment at scaffold_6:69787..73286-

>TCONS_00071156 ID=TCONS_00071156|Name=TCONS_00071156|organism=Clytia hemisphaerica|type=CDS|length=5760bp|location=Sequence derived from alignment at scaffold_6:69787..73286- (Clytia hemisphaerica)
ATGGGCACTTAGTACCAAAAACCTCCGTTCGTCATATAATCCCAGAAAGC
TCGACAACAATAAAGAAGATAGTCCCTAATGTTGATGTTAAAGTTATATC
AAAGAATCTTCTAGAACAAGATATTGGAGCTGTACCAGGTCTTAAAAAAG
ATGAAAATTCAGTAAGCAGGCAACATATAGCACATCCAGAAAAATCAACG
GATAGTATAAACACAGCAAATGTTGCACGTGCAGTTGCAGTGGCAATGGA
ACAATTAAAAAGAGATAAAATGTGGGGCAAAGTATTTGTCCATGTTAGAC
CAAGTGGTGAACTTAAGGTTATGGTACAAGAAACTAAAAAGATGGAAGAA
GAGACTTGACTGCCAAGAAATCACTACACCGAAGATTAAGTGATTATCCT
GTACTCAAACGTTGGGAGATACCAATCAAAGCTAACGTCGTTGGTCGAAG
AAACAAAGACTTATGGGGAGACTCGAAAAAGAAACGTTCATTTTGGGAGG
CAAAGCCCCAGTTTACACTACATGAGCTTGAAATGGAAAACGATCCAGAG
AAGATATATATGGATTTACACTATTCAAGAAATATGCTTGAAGACGATTC
TGACGCAGATAAAAGTATTGCACAATATAAGAAAGATACATTGGAGTCGC
CACCGTTGTTAAAGACTTCTGCGAAGAAGGCAGAGGTTAAAAAGAAAGAT
GGTAAAAAGTTACTCCAACAAAAAGTAACAAAACATAAGGAAGCAGACAA
GAAAAGATTAATTGCATTAAAACCTTTCTTGTCAGCCAAACACGTGACAA
CATCAACGAAAAAGAAGAAGAAAAAGAGAAGCAGAAGATCATTGGAGGAT
GAGGAGTTTGAAGAAATTAATACTGATGATGGAGACTTTTCAATGGCGGG
TTTCCAAGATGGTTTGATAGATGAAAGAGAAGATGCAGAGAGAGTCAAAC
GTGATTCTGAATCAATCGCTAACTTCTATTTTGACCAATACGATGATGAT
GGTGTTGATGGTAACGAAGCTGAAACTTACAGTAAAAATAATGGTAATAA
TGTTGATGATGATACCCCTTCTCAAGATCGACAAAAAAGATCCATTGTTA
ACAAACCTAAAGATCATAAACTTGCCGTTGATAATTTGAAACGATCACGT
ACAGAAAATATTGCAAAACTGTTTCATAAATCAGTAGCAAAGACACATTC
TGCCATCGATGCTTCAGCCAAACGATCAAGTTTGTCTTCTAATATTGTTA
CTTCCAAGGCTGTTAGTAAAACTGACGGTGATTCTGCTGAGCAAAGAAAA
GCTAAAGCTTTGATTCAAAAGGCATTTTTCAGTTCAAAACATGTGGTGGT
TTGCCTTGGTGTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATGCC
ATTTAAACCAAATACGCCAGAAAGAAGATGGGACAAAATGATGGGCACTT
AGTACCAAAAACCTCCGTTCGTCATATAATCCCAGAAAGCTCGACAACAA
TAAAGAAGATAGTCCCTAATGTTGATGTTAAAGTTATATCAAAGAATCTT
CTAGAACAAGATATTGGAGCTGTACCAGGTCTTAAAAAAGATGAAAATTC
AGTAAGCAGGCAACATATAGCACATCCAGAAAAATCAACGGATAGTATAA
ACACAGCAAATGTTGCACGTGCAGTTGCAGTGGCAATGGAACAATTAAAA
AGAGATAAAATGTGGGGCAAAGTATTTGTCCATGTTAGACCAAGTGGTGA
ACTTAAGGTTATGGTACAAGAAACTAAAAAGATGGAAGAAGAGACTTGAC
TGCCAAGAAATCACTACACCGAAGATTAAGTGATTATCCTGTACTCAAAC
GTTGGGAGATACCAATCAAAGCTAACGTCGTTGGTCGAAGAAACAAAGAC
TTATGGGGAGACTCGAAAAAGAAACGTTCATTTTGGGAGGCAAAGCCCCA
GTTTACACTACATGAGCTTGAAATGGAAAACGATCCAGAGAAGATATATA
TGGATTTACACTATTCAAGAAATATGCTTGAAGACGATTCTGACGCAGAT
AAAAGTATTGCACAATATAAGAAAGATACATTGGAGTCGCCACCGTTGTT
AAAGACTTCTGCGAAGAAGGCAGAGGTTAAAAAGAAAGATGGTAAAAAGT
TACTCCAACAAAAAGTAACAAAACATAAGGAAGCAGACAAGAAAAGATTA
ATTGCATTAAAACCTTTCTTGTCAGCCAAACACGTGACAACATCAACGAA
AAAGAAGAAGAAAAAGAGAAGCAGAAGATCATTGGAGGATGAGGAGTTTG
AAGAAATTAATACTGATGATGGAGACTTTTCAATGGCGGGTTTCCAAGAT
GGTTTGATAGATGAAAGAGAAGATGCAGAGAGAGTCAAACGTGATTCTGA
ATCAATCGCTAACTTCTATTTTGACCAATACGATGATGATGGTGTTGATG
GTAACGAAGCTGAAACTTACAGTAAAAATAATGGTAATAATGTTGATGAT
GATACCCCTTCTCAAGATCGACAAAAAAGATCCATTGTTAACAAACCTAA
AGATCATAAACTTGCCGTTGATAATTTGAAACGATCACGTACAGAAAATA
TTGCAAAACTGTTTCATAAATCAGTAGCAAAGACACATTCTGCCATCGAT
GCTTCAGCCAAACGATCAAGTTTGTCTTCTAATATTGTTACTTCCAAGGC
TGTTAGTAAAACTGACGGTGATTCTGCTGAGCAAAGAAAAGCTAAAGCTT
TGATTCAAAAGGCATTTTTCAGTTCAAAACATGTGGTGGTTTGCCTTGGT
GTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATGCCATTTAAACCA
AATACGCCAGAAAGAAGATGGGACAAAATGATGGGCACTTAGTACCAAAA
ACCTCCGTTCGTCATATAATCCCAGAAAGCTCGACAACAATAAAGAAGAT
AGTCCCTAATGTTGATGTTAAAGTTATATCAAAGAATCTTCTAGAACAAG
ATATTGGAGCTGTACCAGGTCTTAAAAAAGATGAAAATTCAGTAAGCAGG
CAACATATAGCACATCCAGAAAAATCAACGGATAGTATAAACACAGCAAA
TGTTGCACGTGCAGTTGCAGTGGCAATGGAACAATTAAAAAGAGATAAAA
TGTGGGGCAAAGTATTTGTCCATGTTAGACCAAGTGGTGAACTTAAGGTT
ATGGTACAAGAAACTAAAAAGATGGAAGAAGAGACTTGACTGCCAAGAAA
TCACTACACCGAAGATTAAGTGATTATCCTGTACTCAAACGTTGGGAGAT
ACCAATCAAAGCTAACGTCGTTGGTCGAAGAAACAAAGACTTATGGGGAG
ACTCGAAAAAGAAACGTTCATTTTGGGAGGCAAAGCCCCAGTTTACACTA
CATGAGCTTGAAATGGAAAACGATCCAGAGAAGATATATATGGATTTACA
CTATTCAAGAAATATGCTTGAAGACGATTCTGACGCAGATAAAAGTATTG
CACAATATAAGAAAGATACATTGGAGTCGCCACCGTTGTTAAAGACTTCT
GCGAAGAAGGCAGAGGTTAAAAAGAAAGATGGTAAAAAGTTACTCCAACA
AAAAGTAACAAAACATAAGGAAGCAGACAAGAAAAGATTAATTGCATTAA
AACCTTTCTTGTCAGCCAAACACGTGACAACATCAACGAAAAAGAAGAAG
AAAAAGAGAAGCAGAAGATCATTGGAGGATGAGGAGTTTGAAGAAATTAA
TACTGATGATGGAGACTTTTCAATGGCGGGTTTCCAAGATGGTTTGATAG
ATGAAAGAGAAGATGCAGAGAGAGTCAAACGTGATTCTGAATCAATCGCT
AACTTCTATTTTGACCAATACGATGATGATGGTGTTGATGGTAACGAAGC
TGAAACTTACAGTAAAAATAATGGTAATAATGTTGATGATGATACCCCTT
CTCAAGATCGACAAAAAAGATCCATTGTTAACAAACCTAAAGATCATAAA
CTTGCCGTTGATAATTTGAAACGATCACGTACAGAAAATATTGCAAAACT
GTTTCATAAATCAGTAGCAAAGACACATTCTGCCATCGATGCTTCAGCCA
AACGATCAAGTTTGTCTTCTAATATTGTTACTTCCAAGGCTGTTAGTAAA
ACTGACGGTGATTCTGCTGAGCAAAGAAAAGCTAAAGCTTTGATTCAAAA
GGCATTTTTCAGTTCAAAACATGTGGTGGTTTGCCTTGGTGTTGTTGATT
CATGGGTCTCACGGAGATGCTCAGCATGCCATTTAAACCAAATACGCCAG
AAAGAAGATGGGACAAAATGATGGGCACTTAGTACCAAAAACCTCCGTTC
GTCATATAATCCCAGAAAGCTCGACAACAATAAAGAAGATAGTCCCTAAT
GTTGATGTTAAAGTTATATCAAAGAATCTTCTAGAACAAGATATTGGAGC
TGTACCAGGTCTTAAAAAAGATGAAAATTCAGTAAGCAGGCAACATATAG
CACATCCAGAAAAATCAACGGATAGTATAAACACAGCAAATGTTGCACGT
GCAGTTGCAGTGGCAATGGAACAATTAAAAAGAGATAAAATGTGGGGCAA
AGTATTTGTCCATGTTAGACCAAGTGGTGAACTTAAGGTTATGGTACAAG
AAACTAAAAAGATGGAAGAAGAGACTTGACTGCCAAGAAATCACTACACC
GAAGATTAAGTGATTATCCTGTACTCAAACGTTGGGAGATACCAATCAAA
GCTAACGTCGTTGGTCGAAGAAACAAAGACTTATGGGGAGACTCGAAAAA
GAAACGTTCATTTTGGGAGGCAAAGCCCCAGTTTACACTACATGAGCTTG
AAATGGAAAACGATCCAGAGAAGATATATATGGATTTACACTATTCAAGA
AATATGCTTGAAGACGATTCTGACGCAGATAAAAGTATTGCACAATATAA
GAAAGATACATTGGAGTCGCCACCGTTGTTAAAGACTTCTGCGAAGAAGG
CAGAGGTTAAAAAGAAAGATGGTAAAAAGTTACTCCAACAAAAAGTAACA
AAACATAAGGAAGCAGACAAGAAAAGATTAATTGCATTAAAACCTTTCTT
GTCAGCCAAACACGTGACAACATCAACGAAAAAGAAGAAGAAAAAGAGAA
GCAGAAGATCATTGGAGGATGAGGAGTTTGAAGAAATTAATACTGATGAT
GGAGACTTTTCAATGGCGGGTTTCCAAGATGGTTTGATAGATGAAAGAGA
AGATGCAGAGAGAGTCAAACGTGATTCTGAATCAATCGCTAACTTCTATT
TTGACCAATACGATGATGATGGTGTTGATGGTAACGAAGCTGAAACTTAC
AGTAAAAATAATGGTAATAATGTTGATGATGATACCCCTTCTCAAGATCG
ACAAAAAAGATCCATTGTTAACAAACCTAAAGATCATAAACTTGCCGTTG
ATAATTTGAAACGATCACGTACAGAAAATATTGCAAAACTGTTTCATAAA
TCAGTAGCAAAGACACATTCTGCCATCGATGCTTCAGCCAAACGATCAAG
TTTGTCTTCTAATATTGTTACTTCCAAGGCTGTTAGTAAAACTGACGGTG
ATTCTGCTGAGCAAAGAAAAGCTAAAGCTTTGATTCAAAAGGCATTTTTC
AGTTCAAAACATGTGGTGGTTTGCCTTGGTGTTGTTGATTCATGGGTCTC
ACGGAGATGCTCAGCATGCCATTTAAACCAAATACGCCAGAAAGAAGATG
GGACAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044229XLOC_044229Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071156-exon-scaffold_6-1575043694:73245..73286TCONS_00071156-exon-scaffold_6-1575043694:73245..73286Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1575043694:72937..72994TCONS_00071156-exon-scaffold_6-1575043694:72937..72994Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1575043694:70728..71708TCONS_00071156-exon-scaffold_6-1575043694:70728..71708Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1575043694:69787..70669TCONS_00071156-exon-scaffold_6-1575043694:69787..70669Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1510915933:73245..73286TCONS_00071156-exon-scaffold_6-1510915933:73245..73286Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1510915933:72937..72994TCONS_00071156-exon-scaffold_6-1510915933:72937..72994Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1510915933:70728..71708TCONS_00071156-exon-scaffold_6-1510915933:70728..71708Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1510915933:69787..70669TCONS_00071156-exon-scaffold_6-1510915933:69787..70669Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1491911889:73245..73286TCONS_00071156-exon-scaffold_6-1491911889:73245..73286Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1491911889:72937..72994TCONS_00071156-exon-scaffold_6-1491911889:72937..72994Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1491911889:70728..71708TCONS_00071156-exon-scaffold_6-1491911889:70728..71708Clytia hemisphaericaexon
TCONS_00071156-exon-scaffold_6-1491911889:69787..70669TCONS_00071156-exon-scaffold_6-1491911889:69787..70669Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071156-proteinTCONS_00071156-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:69787..73286 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.560442 6.07163e-07 0.171629 0.0639393 0 0.107712 0.418844 1.19302e-08 0 1.39136 1.02698 0.932734 2.85047 1.32163 2.14897 2.38736 0.90672 2.3785 0.042049 0.607148 3.16137 1.67141e-05 1.71168e-07 0 7.70784e-08 0 0 0.411431 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071156 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top