XLOC_044139 (gene) - C. hemisphaerica

Overview
NameXLOC_044139
Unique NameXLOC_044139
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:1235251..1243348-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044139 ID=XLOC_044139|Name=XLOC_044139|organism=Clytia hemisphaerica|type=gene|length=8098bp|location=Sequence derived from alignment at scaffold_58:1235251..1243348- (Clytia hemisphaerica)
TTGAGGTCGTGATTTATTTTGACGGGTTTTTGATTTTTTATGTTTTTATC
GTTTGAAGGAATGCATGGATGATTCTTGGAGTGCTTTTTACAAGATCACA
AGAGTCGAGAAATATTGAAAAGACTGGTTGACTTTTGACTTTGGTACGTT
TGATTTTTTATTAGGGGGTAACTCAATATGATTTTTCTTGACTTTTAATA
ATTTTCTTAGGTTTAATTTGAAGAAATATTTACTCAAAATAGACAGCTTG
TTTACTCTCATGTAAACGCTATCAAAATTTAATTTCTTTCGAAAGAATTC
TTTCGGAGGATTGAAAATAGTGTAAAATCCCTTGTCTCTCACTCAACTCT
CACCAAACACAATCATGTTTTTTACAGACAAGATGTCACAAACCTACACA
CCTATCCAACTATTTGAACTGGTTGGTCTGGTTTTTATCTTTATTGTTGG
ACTAATTGGCAATTCACTCGTACTCTACGTCTTCTTGTCGAAGATACGAC
GCCGTGGAGTCAAGGCCAAACCTTTCGAGCTACTTCTCTCTATCCTAGCT
ATCGTGGACTTACTCTCGACTTTTTTCATGCCTGGACTTTTTATATACTT
CACGTCAGTTTATTGGAAGAAATGGCACTTCGGATACATCGGGTGTAAGA
TCTTGAGAAGTTTACCAGTCTTCTTGATCACTATTTCTCAAGGAATTCTC
ATTATCATTGCGTACCAAAGATATCGAATCGTTAAAGACCCTCTTCATAA
CAAACTGACAAGGTGAAAGCAAAAAAACTTTTGATTCCCTAAATCTTTAT
CCAATATTAAGGAGGCCTCCCAGTGGACCTTCAATTCACACAATCACGCA
AAATTTGTTCCCTAATTCTCACGCATTCACGCAATGTTTTTTCACAATTC
ACGCAATGTTTTTCACGCAAAGCTTTCCAATTCACGTTCATTCACGCAGT
TTTTTTTCTACTTTTCACGTATTCACGCAAGTGAAAAAGCCCATTCACGC
ATTCACGCAAACCGCTGGGTGGGGCATTAAGTACAATGTTTATCGTTCGA
TAATTTTGACTCTTGTTTAAGAAATCATGTATCGTAGGAGTTAAGTAAGC
GCTGGAAGAAAAATTGTCGGCGGGAGGGGCTTAAAGCACCTTCTCATCAA
ATTTTGCTCGTTCTCCTACGCACCTCCTATTTTAGAAAACATTCAACCGC
TCTTATCTCCCCCTCTTAAATTATCAATTTATAGACTAGCTTGTTTGTGA
CTAGTCAAGTGAGGCTTTAGGTTAAGGCTGTTGATAACAATTTAAAACTT
ATTCAAGCATTACTCTAATCTAAGTTTCGGATTCTTTTTCTTTAGATGTT
CACTTCTACCCTCACTGAGTATTCTTATCATTGTATCAGCTCTCTTGGTG
AGTCCATGGACGGTCACTTTAAAAATCGTTGAAAACAAAGCTAATGGAAT
AGAGACTTGTAATTCTTCATCAATGGAAGGTCTGTGGATGGGAAGGGTTT
TGAATTTCATATTTGAATGTTTGAACCTGACACGTGGTGTAGTAGCAGCA
GTAACCATAATCGTGCTCAGCCAAATGACGTCACAAGCATTGGAAAAGAA
TAACGATTTTTATAAGAACAACCCAGTCTTACGTTTACGCGTACAACACG
TACGTCGCTTGTTACGTACTATCACAATAGCGTTCAGTATCTTAGTCATC
CCCGCGGATGCGTTTCACGTGATCTACCACACAATGACGTGGACGATGAA
GCTCACACCAGAAACGTTCGCCGTACTCCTCAATATTCACGTTCTGCTTA
AACTTCTCCAATCTTCAAACAGCGCTTTTAATTTTATCATTTACGCCGGA
ATGAAAGGCGACGTCAACAACTTCTTACGTAAACTCAGCCGGCGTGTCGT
GAGTAGATCCAGATTCGTGGTAAACGTAACGGAGAAAAAGGGAGAGGAAA
GAATACCGAGAAAACTAACCACTCTTTCGACTATATCTTCAACTGGGTGT
TGAACGCTCTAAATCCAAACTCAAACCCAGACCCTTAACTCGCTTTTTTA
TAATGAAGATTTATTGGATCAAGAAAATATAACAGTGAAATACTGCATTG
TACCAAAAGTTACAGTGACTATTCCACTCAAAAATAGCTTGCATTGGTGA
AGTGAAAAATTAACTAACGAAATTAAGAGAGAATTATTTGTGCAATGTAT
TTATATTAAAATTGATTTTAAATACTTTCACAAATAATCCTAGTTTGATA
TAAATAATTCTAGATTTTTCTACTCTACGATAGATCTTATAGTCATTGTT
GTCTCTGACCGATCTCTCAAAGAGAAGCCATCTTTCCAACAACAAAACAA
TCTCTGGAAAATTTTGAATTTGAATCTTTTAGAATATAACAACGGATTGA
TACTACATTGAGCGGCTTGCAGAGTCTTCAGAATAGTTAACGCGAATCTT
AAGTAGGAGTAAACCTCGTGGTTCATTTTAACTTCAGCAGTTCTTAACAC
GAAATAAACACAATGGTATAAATCAATGGGAACGATGCAGATACAATACA
CCAACACAATGGAATACAACAATTTTCGCGTGTTCTTCGTTCGCTCGATC
AACTTTGGGTGAGCGGCGTAAAACTCTTTATTTTTGTTGAGCGCTTTGAC
GGTAAGGCGACCGTACACAAAGATGTAAACACACGAAAATAAATCTCTAA
GCAACATTATGATGTCAAAAACGAAGTTCAAAACGAATCCTTTTCTTGAA
GAAGTTTGCGAGGTTGATGTACACGTGTTAAGACCTGACTTTTTGTTCTG
TAAAATATCCAACGTCATCGTCCATGGGATGGTTAAGATGATTGACATGA
TTGCGGACGCAAGCAACCATGTGATGATGAAACGATTTGTTATTGGTTCT
TCTAAGGGTTTGCTTACAACACGGTATCTTTGATAGGAAATAAGCATGAG
TACACACTGTGACAATGTGATGAATATTGATGGTAAACTTCTCAAAGCTC
TGCAGGCTGCGACACCAAAATGCCATCTTTTCCAGTCGACAGCAGTCAAA
TAAATCAGTAGACCTGGTAAAAAGATTGTAGACAGCAAATCAACCACAGC
AAGCACTAATAACAACAACTCGAATCTGCGCGTCGGCTTTCGTTTCATCT
TACCAAAGAATACCCAAAATGCAATTCCATTTCCCACAATTCCGAGCAAA
AATATGAAAATGAGAAAAGCCAAGTTTACGTAGTTGGCAAGGGTGCTTAA
TAACATAATGATGTGTTTGATTCTTTTAGTGAAGTAAAATGTGTTTAAAT
TTGCTCGTCAAATATGGTGTAAATTAACATAAAAGTAATACATTGATGCC
AAATATAAAGGCTTATTGTTTCGCAGCAATGTTTTCATATAACCAGAGAC
CCAGAAGACTTAGATGGTCAATACAATTCAGTTCAAAAAAATCTTCCTGA
ATCACTTTTTCGCCTGTTCTTCAGGTTCGTAGGTTTGTATTGAATGTTTC
ACAAAGTGTTGATTTTTGTTTGCGTGTAATATTTATCTTTGTTTTGAACA
TTCTCTGGTATCCGAAGAACTTTTTCAAAATGGTCACACTTACTTGAAAA
TGTTCAACAAGTCATGGAGGTATTTTATTCAAGGACGTGTGACCTCATTG
TTTGTAATGTTTTGATTGAACCTGTATATTAATACTGTAAAATGTAACTT
CTGTGAAACGCGTATTGGTTTCAAACGAAAAGTTTTCTTTTGAGAAAACT
TCCGAACTTTTCCGTTTTCAATTCAAAAACAACAGATTTAGGTTTTATAA
ATATTGACCTTAAAGAGGCACCTACTTGAACACAAAAATTTAAAAAGAGA
GATAATTTTGTACAACACTATTAGAAATGTCCTGCCCATCAAATTATTGT
CCAAAAATATTACACTTTCGAAACTACACGTTATTAAAAGAAAATGAGTC
ATTAAATGAAATTATACCCCTGTCTCAGCTGAAATCTTTCAGACTTTGAC
AGTATGATAAATCGAAGGCGTTAAATGTAAAAAGGGTCTGAAAAGTTTTT
AATGAGCAGGAATTTCAAATCTTATTGTTGTTTAAAATTCAAAAATATGT
TGAGATTTTCAAAATTACATTCACTTTCACAGGAGTGGGGGTGAGATGAA
ATTTCACACGATATTTTTTTTCTCATCGAGACGATTTTTCAACCAAATTT
CTCAGAAGGGAAGAGGGGCCTAGAGGGCCTGTGATACGAGCATGACAATT
TCAAAAACATTGGCGATGTTGAATAACCAGACTCTCACGAAAAACAAAAA
CAAGAAAAAATGTCACGTTCTAAATACGAACACCTTTGTGGTCAAAACTG
AAATAAAGTGGGTGCAACTTTTAAGGAAGTCCATTTAACCATATTTGATT
GGGTGATGAAAACAAGTCCATTGTTTGATCAAAACCGCATAACTATCTGG
TTTTTCGATCGCTACTCAAATACATCTGGAGAGGGTCTGCTCACTTTCTT
AGCGACTGACATTTTGAACAGTTGGAGGAAAGTCTCGCTCTGGGTGCTAA
GTGGAAAATGAGGTTCTTTTTGTTTTTCCTATCGATTGCACTTTGCAATG
CTGTTAAATTCACAAAGGAAGGTAAGTGGTTTACTGCCTTGTTGTCAAAT
TTGACAAATAATTTACGCCCCTGTCTCAGTGACCCGGGGAGAAATTTCAC
ACATTAAGGATCGAGAATTTAAATCCTTTTGCTTTTAATGAGTGGGATTT
TAAAACCCTAAATGAAATCTACTGGGGATGACTTGTAGAGTTTTCTTTCA
GGTAGAGAAGGGAGTGACTATTGAGTCTGTGACACAAAGTCCCTACACTT
TCATCCATTTTGAGCCAATGAAGAACGAGATGGAAAGGAAGGAAGGAAGG
AAGCATAATGACTATAATTGAAATGACACTGATTCTGTTTATTTTATCTA
ATAGATATCCAGTTTTTTGGTTGTTACTCCAATAGCATGTATATAGAGTT
AGCAACTTACAAGATGGGGCTTCACGATCGAGAATTTCAAATACATTTCA
AAGGATACAAAGATGATGAGGAATGTTCTCTTGAGTCTGGCGAAGACTTC
ATTAAGTACGAATACTTTTATTTGGGCCACTATTACAGTCATTGTGGTAT
TCAACAGACTAGACGAGGGAACAAAATCATTTACAGTCAAACCGTCATGC
TGACATTCGGAAAAGATCCTGTCTCAAAGCTGGTTCATCGAACCGAACAA
ATTGCGTTCGAATTCGAATGCGTTTTAGATGCTGATGCAAAAGTGAAGCT
TCTTGGACCTGGACACGTAAATGTCTCCAGTTTGGAGGAACAATCATTCG
AGAAAAGTAGGGTTTATATGATGACAATTCTTTTTTTACCAATTTTAAAC
TATTCAACAACATATAGACATTTAAGCAATGTTATGAAAACATAGGGCTA
AAATTTTGCAACAAAAAAAAAGAAGAAGTATAAGGACAAATTGTGGACAA
CTCCGATTTTACAGAAAGTACAAACAGTCGGGACCACTACATGAAAAAGG
CAACTATTGCCTTAACGGGAAGAATTTGCCGAACGGGAAGGTGAAAATAA
CCCGAAAAGGAAACTGTTTCCAGATTGAAAATTTCATCACTTTTCTGTTT
TCCGTTTTGGTCAAGAACTTTTCATCATCCCCGAACGGGATATAGAATTT
TTGTAAAAAAGCAGATCTTTATTTCCTGATCGAGAAAAAGTTTCCAAATA
GGGAAATCTTTAATTGGGAATAGGGAAAGTGGAATTAAGAAGTGATTACC
CGGTGGATTTCTTAACTACCTGGTGAATATTATTTATTTTCCTTCCTTTA
CAAGAGGGACAAGTTTTAAACTTTCAACAGGAATTTCCGGAGTGCTCAGA
GGCCACTTTCCCGATTGGGAAACTGGTGAACTTCCCGATTTGGAAAGTCT
AGTCATTTCGGGAATTTTTCCACCTTCCCGTTCGGGAAATATTTCCCGTT
AAGGCAATAGTTGCCTTTTCCATGTAGTGGTTTCCGACTGACAAAGAAAA
CATGATAAGCAAAAGATTTGAAATTCAAAATAAGATCGGCAACAGCCTGA
TAAACACAGAATAAAAACTAATTCTCAATTCTAAAAGAAATTGTTTATTC
TGCTAAGCTTCGAATGAACTTTTGAGTGACTGAACAAACAGTTCACAGGA
TGGTGGATGAAGACAATGATGCTAAAAGGATTTTTTGCCATAAAAGCCAG
TGTGCGATATTTTATTGCGCTGGTTAATCGAGACGGAATATCTTATGACA
AACATGACTTCTAGAAATTCTTTCTCATTTCAAGACTATTGTTCTTCTTA
CTGCGACGGAAATGCTGTTAGAAAACACAACTGGACGCGAATTTTGGTAT
ACAGACGAAAAAGTTGTAACACTGACTGTTCTAAGGTCTTCCAATTAGGT
TTCCACTCAACTCCAAGCACAGAAAGTCACTAAACAGAAACTTTCTTTCT
CCTTTAGCGGACGTTGGCGAATTTGACATCAAATTGGTGCGAACAACTGA
CAACACTTTTACTTCAGAAGATTCGACGTCGCAAATGAGACTTGGTGATC
AAATGTACTTCAAACTCCACTTTGATACCGTCAGAGATGACCTGAAGATC
GCACCCAAGACATGCTACGCTGCAAGTGCAAAGAATTCTTCGGAGAAATA
CATCTTGGTTGAGGACGGGTGAGCCACTAATCATTTGACTGGTTTAAGTA
CCAGAACTACGTGTGCATTTCCCGCCATTCGCCAAATTAAACTCACGCAA
AATTTAAGTCATGAAATTTCCGAATTATAGGGCTATTTCAGTATTTTTGC
CCAAAATATCCTGCAGCATCAAAATTGATTTCCTAATGAAGTACTAAGAG
AAGAGTACATTATACACCCCCCTCAAATAGACCCACCGAGACTACTTCCC
ACTGGGAAAATTAGCCAAAATATCGTCCCCAGTGGAAAATATCCTCCGAT
TTTTGTCCCCACTGAAAGTAATCAAACAAACTAATCCTCCTTGCAAAATA
TTACCCTATTTCTCCCATTCCAACTGAATTTTCTGATTTGAAAACAATGA
GTTCAAATCCCCAGCCATAAATCAATCCTCATCGAGTTTTAGTCCGTTAA
TTCCACTGGCTGAAAAGTACCTACCAGGTCTGTGAGAAAGGGATATGTTA
TACAAAAGGCGACAAAAGGGATAAATCAATGCATACTTCAAAAAATATTA
TAGTAAAATGCACCAGGCGTAACAAACCAATCAGTTTTCTATCGATCAAG
TTTGAACAAAATAATCATTCGATTAATCGAACATGATTGTATGTGGTTTA
ACTGAATTTAGATAGAAAGGGAAAATTCAATTGGTTACGTCATGAACACA
ATGCGTCATTCATTGATTTACTTACATTTTTCATAGTTGTCCAAACAAAG
CAGATGGCACGGTTGAAGTGACCGACACCAACAACCAAAAGATCTTCGAA
TGGCAAAACGAGGCGTTCCGATTTTTCGGCGATTCCGATGCCGTCTACAT
CACTTGTGACGTCACTGTTTGCAAAAGTTCCGACATGGCGGCTGAATGCA
ACCGATGTGACGTCAATAATACAAGACGACGTCGCGGTTTAACTTCGTCA
CATAAAGCGACATACTTGACGGTCTCTAACGGCATCAAATACACGTTGTT
GTTGTAACAGACGGATACAACATTCTTGGACGCTGAAACAGAGATTTGGT
AAAATTCAACAGTGAATGGTATTAGGATTTTAGAAATTTCATGTATCACG
AATAATAAGTTTAAGCTTGTAGCTAACGATAAAAATGATCAAATCGAAGT
ACAGTGGTAATTTTTTTTGTAGGATTGAACTCAAGTTCTTATTTTCATGT
TTGTTGTTTTCAATTTACTTTTGATCGTGGTTATTCTGTTCGAAACCTTT
GCATGATGATAAAGTATGAAAAGAAAATATTTTATAGCTTCATTTTCTAT
GATCTGGAATTCTTGATAAACAATATAAATTATGTAAAAAAACATATCCT
TGCACTATTTACACAAAAGAAGTGCTGCCTAAAAACCATGAACATGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071045TCONS_00071045Clytia hemisphaericatranscript
TCONS_00071044TCONS_00071044Clytia hemisphaericatranscript
TCONS_00071043TCONS_00071043Clytia hemisphaericatranscript
TCONS_00071042TCONS_00071042Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071042-proteinTCONS_00071042-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1235251..1243348 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26	0.27	0.14	0.18	0.06	0.05	2.66	2.77	1.48	1.47	1.49	0.72	1.31	1.33	0	0.01	4.42	3.92	3.36	4.17	4.55	4.42	44.91	61.53	226.05	152	6.04	8.15	0.3	0.46