XLOC_044083 (gene) - C. hemisphaerica

Overview


Name	XLOC_044083
Unique Name	XLOC_044083
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_58:1450097..1459020+

gene from alignment at scaffold_58:1450097..1459020+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_044083 ID=XLOC_044083|Name=XLOC_044083|organism=Clytia hemisphaerica|type=gene|length=8924bp|location=Sequence derived from alignment at scaffold_58:1450097..1459020+ (Clytia hemisphaerica)
AGAAAAACAGCAAGTACctcaaaatcttaaatcaaATTGGAAAATGTCGG
GTAGTATTCTCATTATTTTAAAGCCTTTTATCCTTGTTTTTTCATCAATC
TATACAATGTATAAGTTTTTATTTCCAAACAATAGTAGGCTTAAAGCAAT
GTGATTGAAAGACTCATCATCAGTTTGTATGATAATATTAAATACCTATA
TATATATGTTGAGCTGAGTGCTGGTGGTGGCCTCTGGTTTATGCAAAATG
ACTGTCTGACTGAATGACTGTATAAAGACAAGCCTTCTTTTTTGTTATAC
TGTTTGCAAGATAGCTTGATAGTTACCATGAAGTAGGGTAAGACGTCAAT
CACAtataagttgtgttcgcgtcatttccagctccaaaaagtgagtcggt
tggtcggtcggCACTAAAATCGTCGGAAAAGTGCGCTctgacagtcaggc
acatcctggcaaatgaacggggtgagcatttgcatggggtattcgtcacc
cagtgtaaatgagataggacgtctcaggctaaaagcgtgaaNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTTctttgaaataaagcaaaatat
ttccaacccggttcaattaaactgggtattcggcgctattacgtcacttt
cgttttcgaccccgttcatttgccaatggttgcaagtgaaaaataccccg
ttcatttgccaggatgtgcctgactgtctgAACGTAGGCAGTCGGTTAGC
ACTAGAATCATCAGAAAAATGCGCCCTGAACATAGGTTTGTTCGCGCGGC
AAGAATTTTCAAGCGCACTAGCTGCATAATGAACTTTGTTACATATCACG
GTTGCAAAAAACAGTTGCATAGCTCTTTTTAACTCAAACAATCGCTtgta
gctctactctaccatttctgttttgatttaacttggtaacttgcatcagt
ggaggctaacatgcataaccctcaaatgaatgacctggcagttagtcaca
ctagcttcccgccaaaatgcgcTACCACACTTTGGAGAGTGCGAGGGAAA
GCGTGAacttatgagaaagaaaaaggaaagaaagaaacgagaagaaaatt
agttcccgctttgatgttattatcaaaacaaaaggatcagtcacgccgac
attcctttccacacgtcagcaatctagtttttataaatataaaaactaga
ttgtaaggatgattctaaaaaagaatagccgtttccttagacgactacgt
ttattataatatgggtaaaattgccccttttttaacctgactgaaattcg
agccattactagcaaccctgcggggcccaaggcgtcgagtatgcacccgg
cacagtaaCAAGCccttactagcaaccctgacctaagcaattccaaacaa
caaaacccccggaaaatttaaaatgttggaatgagcaatagacaagagct
ttttccataaaataTTGCCACCCCCCCCCCCANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTAAGTTGCAGGAGGTTCTTGGGCCTCAAAAccttaatttattt
atttttatttagaatTGTTTATGAGATTAGgcattttctatttctatttg
gttgagtcgtAGGAGGCTTAACCACTgcaagtgggaatcgaacctcagtc
accttcgcagcaaccaaggtcaatgaccactataccacagtgCCTTTTAT
TTTGCAGTCCTacaaaaggtctattgatttTGGTTAAGTATTTATTTTTC
CATACAGGTTTTgcttttttcaggcaaaaattgCAAAGCATAAAAATCCA
TGATACTTTTGGAGGATACTCCAAAATTAGAAAAGAGCTAAAAATGGCAA
AAGCTGTTTTAAATTGAACAGAAAACTCTGTTGTTTTGAAGACTGTGAGT
TGAATATTGCCTAGAACAGCTTCTATAGTATAGACAAGCAAACCAGTTCT
CATCTGAACTTTTTCTCTCACACTAAATTGGCCAACTCTGAGTTGAAAGT
AAATGACCAGCTGGGTTGAAAAGTTAACCCAAAAGGCGTGGAATGATTAA
GGAGAAGTACGAAATAAGAAATCATGGTAGTTTGATAGAACGTATCTATT
TGCAATATATAAGGAGTCACTATAACAAATTTATTAGGCCTTTAGGCCCT
CATACACTTGTCAATAAtaaatcaatattcaaaaactGTTACTATAAGTA
GAGCATAAAATATTATTGTgctaaaattggtaaaatgttaaaaaaattaa
aaagctaagTTAAAAAATTGGATCCAGACGATGTTAGAATTTTGAACCTA
CTCCATTGTTTGATTACTGAGCAAGAGATAGTTTAAATGGAAGTTTTTAA
TTTGGTTGTGATGTAAATATTGATCTCTCAAGCTTGGTCTGTACCCTGGT
TGCAGTCAAAATTTTCCTGTATTGACCTTCAAAACAATTATTATTGTATA
AATagatagaaagaaaattttattgatttagTTTGTTTAAATTAACTGCC
TCATTCATTTTTGGTAAGGAAAACTTCTCCAGGTCATTAATAAGTTTTGA
GCGataacttttttgtttgttgtATAGTCTATATTAGTTTGATTTTATGC
AAGTTGAAAATCAAGTTGAATGTGGATGAGGAAAATGGCACAGAAAGAAA
CCTAAATTTTATGATGCAATTAATTATTTTAGATGAATTAAATAATGGCC
TTATCGAGCATCCATGATGTGGGTACTCATGGGCATGCTGTGAATCATCA
AAACACTTTAAATCATCATCACCACCACCTTCACCATCATCACCTACCCC
ATGCGTTGATTGGGGATGAAAAGGTAGCTATTTGACTCTGCcttgttact
ttttctataaaGCTAGGAAAGCTTTTTATTACGAGTGCCTATTaatattt
gaaattgaaatggtaTAGTTTTCTAAGAATccatttttaccaaaaatttt
cattcatcaaagaaaTAGCCattcttcctttttcttgcAGCACTTTCGAC
CGAATCCTGACGCTAAACCATTTATTCCAAACCCAATTGCAATCGCTGCT
GCAAATTTCCAATTTGTGAAGGATAAGGTATGTTCTAAggcttttttgaa
ttttcgatAATGCGCTTTGTGGCATTAAACAAATACTTAATCTTGTAGAA
CCACACTAACTTAGTCTATAGTAAGAATTTAAGAATATAATCCTATGTAT
TTTGATATGAAAAGTTTCATATTAAAATCGtaattttgttttaatattta
aatatttctaGAACATCAATAACGTTGTACCTCGTTTTTGGATCAACCCG
AACGGTGAACACCCAGAAAACCTTGTTATTGCTCCTCCACCTTCTGGTGC
AAATCTCTTGAAGAAACAACACATTGCTTTTCATTTGGTCTCCAACCTAC
TGGACGAAGAACTACCAGAAGAAAAAGACCGTGATATTAATGCTGGTTTC
CCTAACTCTCCAAGAATGAATATGTGAGTGTCCATTTATCCTCCTGATTG
ATAAGAAATAGATTTTAGTCAACAGTTTAGAATCAATGAACTCAGTTCtg
gtaattcatgatatgcaccattgtagTAATGACTAgtgaaattatgcaac
ttttctgtttttgttccacccaatacgtcactttttctattgtttaagca
ggtttaagtgacgtattgggtagAAAAGTTCttagaagactctccagtgg
tgcaaaTCATGATATGCATATCAAATTTGATGAGCAGCAATTCTGGTCAA
CAAATTTATCCCACGTCAAAGGAAGAAACTTTGGggtgaatttaatttgg
tggatggtggaaatagtttttaaaaggcctgaaatagcacaaatttgggt
aatgaataaaataattcaaatctATTTTCTCCCTTGGTAGTTATGATCAA
AGTATGGAGCATGTTCAAGGATGGCAAACGACCACTGAACCTCTTAATCT
TCCTTTGGAAATGGTCAAAGCCAACGCTGAAAATAAAAGCATCAACAACA
AATCAATCCATGAAATCTGGTCACCAGACCCTTCTCCAAATGGATTGAGT
AGTGTTTCACCAACAGAAGAGATCAACCCTTATGTTGGTAACCAACAGCA
ACAACAGAATTCTCAAAGCACCAGTCCTGATAATTCCTTCGATCAATCTT
CAGCAACTGAAATGGAATCTGGTGATCAACAGGTCCCTCAACAACTCCCA
CCACAAGCTTATTCAACCAATGTTTATGAGGACACTGAAGGAGTGGCTAA
CCCGGAACCTACCTCCCCCTCACAAATGTATTACCCACCACCTCCTATCA
TCCATCAACCTTATGTTTACAGAGGAATGGGTCCGTCCGGGGCGCACAGG
GTTCCGCCGCCAGAAATGTATCCTGTGCATCCAGGGCGTGAGGGGATGAT
GACTAGGCCTGTAATCTATGGACCAGGGTACTACGGTCCTCAAGGACCAC
CCCAACATAATAGGTATCCGCCATCTCACCACCATTCGAATGAAGAAATG
AGATACAGGCCACGTTACCATAACAACCATCATAACAATAGATACCATCA
TCATAACTCGCATTATCATGGGAACCATCACCACCACCATGAAGTCTCCT
ATGAAACCAAAATGTCTTTCTTGGAGGAATTGAGTATTGGGTTAGACGAA
TGTCGAGACCAACTTCGACATTTGGAAAGGGATTACAAGAAGGTGAGCAA
TCTTTAACGTTTATTAATTTCCATTCAAAATACAACGGATAGAGAGATAT
AAACTTTTAAATAGCGAGCTTACGTATGTGTGTTTTCTGCGACGGGAACG
GTTTTGCTTGGGTCAtgtctagatcctgattgactgcggacgacggtaaa
tcacaTCTTTACCGTCCTCCATTCTGccggtcagaactgcgggtttttcc
aaatcgcttcttTCACTCcgccattttcaaaagtgcaaatacattaAAAC
TTACTAATCTGGCTTATTCTACGGTTTGATTTAATTGTatgattattttt
ctttaaccttAGGCTGATGTGACTTTATCACGTGATTTTCGATTGCGTAA
ATCTTCGATGGGCGACACGTCTTCATCAAAATACCCACCCAATTCAACAC
GAGTGGACAAACTGATTGCTGATCAAATGAGAGAACATCAAAAGGTANCC
CACCCAATTCAACACGGGTGGACAAACTGATTGCTGATCAAATGAGAGAA
CATCAAAAGGTAACAATCTTTtcttcaagaaaatgttttcttcagtctca
aaactttttcaaatctttatcATTTGAACGATGTAAGACTGCTGGTAGCC
TTGGTTTAATGGGAGCTAGTTCGGGGCAAATTATGGCTTTTTTGATTAGA
CTGGATAGTGTTGATAATTGGCCTTGGTCTTAATTGGCAGATTCTATTCT
TGTCTTTGATTGAGcacgtatttaaaaaaaaaaacagacagaAAAGCATG
ACCAGGTGACTAATTTTGGGAGGTGCTTATGATACATTTCATCTCTTTGC
TGTTTTCATGTAAATCTTGAAATCCAAAAGAGAGAAATTTCAAGATGGCA
ATATCCTCACTGAGCTCATTACCATCAACCAACAAGAAGGCAAGGTTCTT
CAGAAGCGTCTCTAGTCTAAATGAGAGTATCCTGCTTGTCTGCTGATCGA
AATGCCCACGTTAATGGACCATCGTAGCAGAGATTTCCCGTCGCCAATTG
TCCTAAGTGACGTTATAGGTCATCTGAACTTCTGTAAAGTTTATGCCCTA
AAAGACCAGATCGTGGAATACAGTAATATTCgattttgataataaaatta
CGTTATTCTTTTCGTTTGTTTTCAGATTGAATCATTGATTGGGCGTATTG
AACGCCTTGGTTTCACGCCCATGCACCCTAACGTGGGCGTTACCCTTGAT
TCTTGGTTGGCTGCAATCAAAGATTTGAGGAATGCGCGGAAGAATGAGGT
ATCAAATATGATGGACACCCCGGGTGTGCAGTATGGTTCCAAATCACATT
CACAAGCTGGTGAGTTGCAAAAAGAATTTACGTAACATTTATACAATTGC
TCTACAGGAGAAAAACTTGTTATAAACAAACAATGGTTTACATTTAGTGT
TAAAGTTAAAGCCTTTCTGTACAAGCAAAAGTTTTTCGCAATTCATGTTC
ACGTCCAACGGAATTCTAAAACTTGCATTTACTTGgctttctttaaaact
tttttaaattatttcttattcgtcattgttttccccttttagATGTTTCA
AATCTTATCAAGACAATGAAAGAGGTGAACAAGTTCACGCGGTCCGCTCG
CACAGTCGTTTGGTGCGCCATGCAAATGTTGTACGCTAATTGTACGACTT
CTTCACCAAGCGGTGGCTGATTGAATCAATACATGGCAGGAAGACACAGC
ATGGTACGGACCACACCTGCAAAGTGAAACCTACACCCCAGTGTTTTGAT
GTATAAAGAATCGCAACCGTTTGAAGTGAAAGAAACCGCTCACATGGATA
ACCCTTTTGTCGTATCGAAAATTGTAGTTTAAAAAACATGATATTATTAT
GACTGGTTAAATGAGTTCATTTTCACAACGTTAATTTTTCCTGGGAAATC
AAGCTTACGGTGCTTTCAACAAAAGTTCTcgaatgtttaaaaattgatat
tattTAGTCGTATATGGAAACTATATCCAATATGCCTTTTGGTTGATGGG
CATTAAAGTGGAATTTTTGATTACTGTAATGTGGAATGTTTTATCTCAGA
CAAAATGATGCCAAACCTCGAATCCCTGGAACAATCGAATGTTTATTTTG
GTGTTAGAAATAAATGGTGTAACCTTATGACGTAATGGTATTATTGGACG
ACAAGACTGTTACAATGTggagtttttaaaaatcaaattttattgttttt
ctttttcatctcgTATATTAATTTATGAttatatgttgtttttttttttc
agtttgaacatttTGGGTTCGGTTTAATCTTATTCTTAGCTTACTGTTTT
CCAGATAATGAGAACACATGGTCGCTTTCAGTATAATTGCAAAATTTTCC
CGATTATTTGAGAGTATGTAGGGACaaactttttgtaattttgccGGATA
AAGAATTTCCTTGTAACATGCGCAACCTGATACTTCGAGGTTTTCTCATA
TGAAAATTTGACCTGAGTTTGAGATTTCAACAATcattctaattttttta
atagaagtttatggtttttttataagactaACTTAAGAATCGTGTTTTTT
TCTCCCACTTATGATGACACACAAAAGAAAATGAGCAAAGTGTTCTAAAT
TAATCTCAACCAGATCTGTTTTCA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00070891	TCONS_00070891	Clytia hemisphaerica	transcript
TCONS_00070892	TCONS_00070892	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00070891-protein	TCONS_00070891-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_58	supercontig	scaffold_58:1450097..1459020 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.48	20.64	12.67	9.03	141.74	106.41	76.26	83.11	46.61	62.91	46.48	37.98	38.24	40.94	29.54	35.87	48.95	46.34	28.15	30.81	47.82	49.89	39.64	40.76	43.76	49.01	25.49	21.03	30.7	32.12

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XLOC_044083 (gene) - C. hemisphaerica