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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070892 ID=TCONS_00070892|Name=TCONS_00070892|organism=Clytia hemisphaerica|type=transcript|length=1306bp
GGACAAACTGATTGCTGATCAAATGAGAGAACATCAAAAGATTGAATCAT
TGATTGGGCGTATTGAACGCCTTGGTTTCACGCCCATGCACCCTAACGTG
GGCGTTACCCTTGATTCTTGGTTGGCTGCAATCAAAGATTTGAGGAATGC
GCGGAAGAATGAGGTATCAAATATGATGGACACCCCGGGTGTGCAGTATG
GTTCCAAATCACATTCACAAGCTGATGTTTCAAATCTTATCAAGACAATG
AAAGAGGTGAACAAGTTCACGCGGTCCGCTCGCACAGTCGTTTGGTGCGC
CATGCAAATGTTGTACGCTAATTGTACGACTTCTTCACCAAGCGGTGGCT
GATTGAATCAATACATGGCAGGAAGACACAGCATGGTACGGACCACACCT
GCAAAGTGAAACCTACACCCCAGTGTTTTGATGTATAAAGAATCGCAACC
GTTTGAAGTGAAAGAAACCGCTCACATGGATAACCCTTTTGTCGTATCGA
AAATTGTAGTTTAAAAAACATGATATTATTATGACTGGTTAAATGAGTTC
ATTTTCACAACGTTAATTTTTCCTGGGAAATCAAGCTTACGGTGCTTTCA
ACAAAAGTTCTcgaatgtttaaaaattgatattattTAGTCGTATATGGA
AACTATATCCAATATGCCTTTTGGTTGATGGGCATTAAAGTGGAATTTTT
GATTACTGTAATGTGGAATGTTTTATCTCAGACAAAATGATGCCAAACCT
CGAATCCCTGGAACAATCGAATGTTTATTTTGGTGTTAGAAATAAATGGT
GTAACCTTATGACGTAATGGTATTATTGGACGACAAGACTGTTACAATGT
ggagtttttaaaaatcaaattttattgtttttctttttcatctcgTATAT
TAATTTATGAttatatgttgtttttttttttcagtttgaacatttTGGGT
TCGGTTTAATCTTATTCTTAGCTTACTGTTTTCCAGATAATGAGAACACA
TGGTCGCTTTCAGTATAATTGCAAAATTTTCCCGATTATTTGAGAGTATG
TAGGGACaaactttttgtaattttgccGGATAAAGAATTTCCTTGTAACA
TGCGCAACCTGATACTTCGAGGTTTTCTCATATGAAAATTTGACCTGAGT
TTGAGATTTCAACAATcattctaatttttttaatagaagtttatggtttt
tttataagactaACTTAAGAATCGTGTTTTTTTCTCCCACTTATGATGAC
ACACAAAAGAAAATGAGCAAAGTGTTCTAAATTAATCTCAACCAGATCTG
TTTTCA Run BLAST on NCBI transcript from alignment at scaffold_58:1456866..1459020+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070892 ID=TCONS_00070892|Name=TCONS_00070892|organism=Clytia hemisphaerica|type=transcript|length=2155bp|location=Sequence derived from alignment at scaffold_58:1456866..1459020+ (Clytia hemisphaerica)
GGACAAACTGATTGCTGATCAAATGAGAGAACATCAAAAGGTAACAATCT
TTtcttcaagaaaatgttttcttcagtctcaaaactttttcaaatcttta
tcATTTGAACGATGTAAGACTGCTGGTAGCCTTGGTTTAATGGGAGCTAG
TTCGGGGCAAATTATGGCTTTTTTGATTAGACTGGATAGTGTTGATAATT
GGCCTTGGTCTTAATTGGCAGATTCTATTCTTGTCTTTGATTGAGcacgt
atttaaaaaaaaaaacagacagaAAAGCATGACCAGGTGACTAATTTTGG
GAGGTGCTTATGATACATTTCATCTCTTTGCTGTTTTCATGTAAATCTTG
AAATCCAAAAGAGAGAAATTTCAAGATGGCAATATCCTCACTGAGCTCAT
TACCATCAACCAACAAGAAGGCAAGGTTCTTCAGAAGCGTCTCTAGTCTA
AATGAGAGTATCCTGCTTGTCTGCTGATCGAAATGCCCACGTTAATGGAC
CATCGTAGCAGAGATTTCCCGTCGCCAATTGTCCTAAGTGACGTTATAGG
TCATCTGAACTTCTGTAAAGTTTATGCCCTAAAAGACCAGATCGTGGAAT
ACAGTAATATTCgattttgataataaaattaCGTTATTCTTTTCGTTTGT
TTTCAGATTGAATCATTGATTGGGCGTATTGAACGCCTTGGTTTCACGCC
CATGCACCCTAACGTGGGCGTTACCCTTGATTCTTGGTTGGCTGCAATCA
AAGATTTGAGGAATGCGCGGAAGAATGAGGTATCAAATATGATGGACACC
CCGGGTGTGCAGTATGGTTCCAAATCACATTCACAAGCTGGTGAGTTGCA
AAAAGAATTTACGTAACATTTATACAATTGCTCTACAGGAGAAAAACTTG
TTATAAACAAACAATGGTTTACATTTAGTGTTAAAGTTAAAGCCTTTCTG
TACAAGCAAAAGTTTTTCGCAATTCATGTTCACGTCCAACGGAATTCTAA
AACTTGCATTTACTTGgctttctttaaaacttttttaaattatttcttat
tcgtcattgttttccccttttagATGTTTCAAATCTTATCAAGACAATGA
AAGAGGTGAACAAGTTCACGCGGTCCGCTCGCACAGTCGTTTGGTGCGCC
ATGCAAATGTTGTACGCTAATTGTACGACTTCTTCACCAAGCGGTGGCTG
ATTGAATCAATACATGGCAGGAAGACACAGCATGGTACGGACCACACCTG
CAAAGTGAAACCTACACCCCAGTGTTTTGATGTATAAAGAATCGCAACCG
TTTGAAGTGAAAGAAACCGCTCACATGGATAACCCTTTTGTCGTATCGAA
AATTGTAGTTTAAAAAACATGATATTATTATGACTGGTTAAATGAGTTCA
TTTTCACAACGTTAATTTTTCCTGGGAAATCAAGCTTACGGTGCTTTCAA
CAAAAGTTCTcgaatgtttaaaaattgatattattTAGTCGTATATGGAA
ACTATATCCAATATGCCTTTTGGTTGATGGGCATTAAAGTGGAATTTTTG
ATTACTGTAATGTGGAATGTTTTATCTCAGACAAAATGATGCCAAACCTC
GAATCCCTGGAACAATCGAATGTTTATTTTGGTGTTAGAAATAAATGGTG
TAACCTTATGACGTAATGGTATTATTGGACGACAAGACTGTTACAATGTg
gagtttttaaaaatcaaattttattgtttttctttttcatctcgTATATT
AATTTATGAttatatgttgtttttttttttcagtttgaacatttTGGGTT
CGGTTTAATCTTATTCTTAGCTTACTGTTTTCCAGATAATGAGAACACAT
GGTCGCTTTCAGTATAATTGCAAAATTTTCCCGATTATTTGAGAGTATGT
AGGGACaaactttttgtaattttgccGGATAAAGAATTTCCTTGTAACAT
GCGCAACCTGATACTTCGAGGTTTTCTCATATGAAAATTTGACCTGAGTT
TGAGATTTCAACAATcattctaatttttttaatagaagtttatggttttt
ttataagactaACTTAAGAATCGTGTTTTTTTCTCCCACTTATGATGACA
CACAAAAGAAAATGAGCAAAGTGTTCTAAATTAATCTCAACCAGATCTGT
TTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070892-exon-scaffold_58-1491911889:1456866..1456905 | TCONS_00070892-exon-scaffold_58-1491911889:1456866..1456905 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1510915933:1456866..1456905 | TCONS_00070892-exon-scaffold_58-1510915933:1456866..1456905 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1575043694:1456866..1456905 | TCONS_00070892-exon-scaffold_58-1575043694:1456866..1456905 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1491911889:1457522..1457705 | TCONS_00070892-exon-scaffold_58-1491911889:1457522..1457705 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1510915933:1457522..1457705 | TCONS_00070892-exon-scaffold_58-1510915933:1457522..1457705 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1575043694:1457522..1457705 | TCONS_00070892-exon-scaffold_58-1575043694:1457522..1457705 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1491911889:1457939..1459020 | TCONS_00070892-exon-scaffold_58-1491911889:1457939..1459020 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1510915933:1457939..1459020 | TCONS_00070892-exon-scaffold_58-1510915933:1457939..1459020 | Clytia hemisphaerica | exon |
| TCONS_00070892-exon-scaffold_58-1575043694:1457939..1459020 | TCONS_00070892-exon-scaffold_58-1575043694:1457939..1459020 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:1456866..1459020 + |
Blast
The following BLAST results are available for this feature:
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