TCONS_00070891-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070891-protein
Unique NameTCONS_00070891-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length557

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070891-protein ID=TCONS_00070891-protein|Name=TCONS_00070891-protein|organism=Clytia hemisphaerica|type=polypeptide|length=557bp
MALSSIHDVGTHGHAVNHQNTLNHHHHHLHHHHLPHALIGDEKHFRPNPD
AKPFIPNPIAIAAANFQFVKDKNINNVVPRFWINPNGEHPENLVIAPPPS
GANLLKKQHIAFHLVSNLLDEELPEEKDRDINAGFPNSPRMNIYDQSMEH
VQGWQTTTEPLNLPLEMVKANAENKSINNKSIHEIWSPDPSPNGLSSVSP
TEEINPYVGNQQQQQNSQSTSPDNSFDQSSATEMESGDQQVPQQLPPQAY
STNVYEDTEGVANPEPTSPSQMYYPPPPIIHQPYVYRGMGPSGAHRVPPP
EMYPVHPGREGMMTRPVIYGPGYYGPQGPPQHNRYPPSHHHSNEEMRYRP
RYHNNHHNNRYHHHNSHYHGNHHHHHEVSYETKMSFLEELSIGLDECRDQ
LRHLERDYKKADVTLSRDFRLRKSSMGDTSSSKYPPNSTRVDKLIADQMR
EHQKIESLIGRIERLGFTPMHPNVGVTLDSWLAAIKDLRNARKNEVSNMM
DTPGVQYGSKSHSQADVSNLIKTMKEVNKFTRSARTVVWCAMQMLYANCT
TSSPSGG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044083XLOC_044083Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070891TCONS_00070891Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027963MEIOC
Vocabulary: Biological Process
TermDefinition
GO:0051321meiotic cell cycle
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051321 meiotic cell cycle
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 387..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..343
IPR027963Meiosis-specific coiled-coil domain-containing protein MEIOCPFAMPF15189MEIOCcoord: 385..544
e-value: 4.1E-38
score: 130.5

Blast
[Close]
BLAST of TCONS_00070891-protein vs. Swiss-Prot (Human)
Match: MEIOC (Meiosis-specific coiled-coil domain-containing protein MEIOC OS=Homo sapiens GN=MEIOC PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 7.775e-23
Identity = 55/157 (35.03%), Postives = 94/157 (59.87%), Query Frame = 0 
Query:  389 ELSIGLDECRDQLRHLERDYKKADVTLSRDFRLRK-SSMGDTSSSKYPPNSTRVDKLIADQMREHQKIESLIGRIERLGFTPMHPNVGVTLDSWLAAIKDLRNARKNEVSNMMDTPGVQYGSKSHSQADVSNLIKTMKEVNKFTRSARTVVWCAMQM 544
            EL I L+EC +Q R LE++ KK ++ L++++  +K SS  +T   +   N +RVD+LI D++RE  ++ +L+G++ERL  + +H ++   LD  L +I  +++ RK+E+ N  +    Q   +     DV  L   +KE+   TR  RT +WCA+QM
Sbjct:  753 ELHIRLEECCEQWRALEKERKKTELALAKNYPGKKVSSTNNTPVPRLTSNPSRVDRLIVDELRELARVVTLLGKMERLRSSLLHASISTALDRHLESIHIVQSRRKDEIVNASNRQR-QGVPRCQDDRDVFALASAIKEMCVATRKTRTALWCALQM 908
The following BLAST results are available for this feature:
BLAST of TCONS_00070891-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEIOC7.775e-2335.03Meiosis-specific coiled-coil domain-containing pro... [more]
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