XLOC_044061 (gene) - C. hemisphaerica

Overview
NameXLOC_044061
Unique NameXLOC_044061
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:741242..750271+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044061 ID=XLOC_044061|Name=XLOC_044061|organism=Clytia hemisphaerica|type=gene|length=9030bp|location=Sequence derived from alignment at scaffold_58:741242..750271+ (Clytia hemisphaerica)
AACGAACTTCTTGAAAGTTCCgagaaaaagatcaaaacaaaaaaaaatct
gagAGAACAGCAAGTCACTGAGAAGTTTTGAAgttcaaacaagaaaaaat
tgtaaaaattaaagTAACAGGTATGTTTTCCATTCTACTTCTGTAACGTA
TATGTATTTTCGTATATGTTTTGATTTGCtttctctctttgaaaacaAAG
TATTGAGATAGCACAACAAAATTATAATCATTCTAAAAGATAGAAAGTAA
AAACTGTACGTatattttttttcctatttttctctgttatttttttgtga
atttgtCTTTCATCTTCAGAGGTTTTGGGTTTCATCTTCAAAGGTTTTTG
TATACATCAAACCAGGGCTtatcaatcaaaaaatattgaacttgATTCCT
GATCATAATCGGACACGATCAATAATATGAGACCAATTTTGGCCTACTTG
TGGACATTGATACCATGTGTTAAacttttatcaattatttgaaCATAGTG
AATATTGACAAATATCAGTGGAtatgttatcttcaaaaattgataaatct
tTAACACTGTTGAGATCCTGTGTCACAATGATCAAATCAAGACAACTTAT
TTACACCTAAAGTGAtgacaaaaaaatgataaaaaattaacaaggtctat
tttttggaaatgataaaaaatagtctaaaactttaatttaaccttgaaat
tgaaaatcctttggacagaccaaaaatatgataattttttatcaaacttg
ACAGGTTTCAggctcaaaaacaatgaaatgataattttttaacaGATTGA
AGTTCANNTCGTTTATTTTTaactctttgttttgatacaTATCTCTTTAA
ACTATACGCAGAACTACAATTTCGAATAACTTGaacaaaaatagataaaa
acttAACCAAAACTGTACTTGTAAATATTACACTAATTAAGTTTAAACNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCGACCCATgacaattaaaattcagaaact
tattaacaaaacaaatttttggacaattttatgATGTCCACAATGGTGTC
TCATATTATTGATCGTGTCCAATCTCGAAAGTTATTGACCCCATCCAGCC
AGTCACATTTCACCAGCCATTTAAGGCAAGTACGATGGATAATAACTAAT
TACAacatcataatttttttctcgtctgattgattcaattgatttgtctt
ttaaaCAACTGTTGCCTATACAAAAAAACTTATGTCTTTTGTTCTGGCTT
GTACTACACGCTGTACTAATTTCTTATATTCAATAGTAGTTTAGGATAac
ggtctattgaataacaaataaCTCAAGCCAGTACAAATTGGGTAAATTAT
CTTGTACCTaggtagcctggagatccatgctatgatttcttattctatat
actgatggcgaaatatatagcatggtatgggctgacagtttgaatttccc
atatcctaataacggttgaaaacacagccaatcaaatcctgttattgttt
cactggtcaaactttcttaaagaaagcgcaagttccgaaatttggttttt
attttagtaagtgaggacagcgctaaattcgaatttcccactgtaatttt
ttttaggccaaaaccagactcacagctctgacccgtcaagtattcatcag
atttaaaaaaaatacgcagacgggttcctgtctaGTACCTAGATAACAAC
AGCTGTGTTGTGAAAAACCAATTATTTGATGTTATCATTAAAAAAGATTC
TGCTGGAGTAAtcagttattcaaaagactgtcaGGTTCTCCCAAAGGACC
ATATATCATTACATTCCCTTCCCTTAAAGGTCTATCAAGTCATGATTGAA
ACTGAAAAAACTATATTTGATTGAGCTCTATCAAAATCCAATGAACTTAA
GCTGACTTAAATTGTTCAATTAACATTTGGttgaatcaaattttttcctA
ATCATGTTGTCCTCGGTCAATTTACTGtaaggcatgtccaaatttttcaa
atttaccttAATTTCTTATTACCATTTCCACTTGTCGAATCATATCACTT
CGTACATTGAAAGAAGCAtattggagtgtagatcactaAAATGGCTGTGC
cataattaaatttttcacccaaaaaaatattacgTAAAAaccaaaaactg
ctgacgttatcccagtgatctacactccaatacACTTCTTCCAAAATGTA
TGAATTGACATGATATGACCAGTGGAAAATGTGATAAAAAATTTGGAAGT
GCCTTAAGTTGCTCTAAAGTCATGtttaataattaaaatactTCAACATA
AATTGCGGTTGAGAGAATATTTCATGTATGATATGGCCTTTTTGCCCTAA
AAGTAGCACTTTTAGGGTTGACTTTTCAAATCCTGAGAATTTTTGTGTTA
TACGGAATAAAATTTTGCAGGTatgcagaatttaattttgcggatttaaa
ttaaattccgcaaaaattgttccacaaaaatttcttcccttaaggtacat
tAGGCCTGATtagttcaaaaaaaatttagtgCATAAAAAGagatcaattt
ttttaaacagtttgtgaacatttagagaatttatttttcaatttttactg
aTGATAGTAATCGAAAGACACTGAAACGTCTAAAATATatgtattttaaa
ttttattcaaataaaatgaaaatgcttctgTGCTTGAACTTCACATTGAA
AATATTCAGGAGGACCAATCAATTTAAGGATACATTAAGCAAGCatgaac
ttttaatttttttacaaattttagccttttgtttcaaaagtaaatgtctt
GAAAATTCATCCTAGGGCTAATTCAATTCTCAAtctaatttgattttgtt
ggtGTTAGTAATGGTATAACTTTTTCGGCcaattattattatatattacC
TATTTTCCTAAATTGCCATTAAAGTCATACAATTACTAACACTAACAAAG
TCTAACTAGATTGAAAATTGAAGTATGGAACATAAAATTGTAATGGAAAG
ATAAATGAATCTTGATATTGACAAAACATGAACTGTTAGAAACGAACAAC
TGAGGAAATCTGTGAGTAATTTATGTTTGAGTTGTGCCTTAATAAACTAC
AGTAACCTCTGAGTCTTCCAGAAAAATACCTTCAATTGAACAGGCTCTAA
AAGCTTAATTAGCATTTTAAATCATTGCcaacttttctttctttagaTAT
CAACCATGGTGAAAGGAGGCCGTAAAATACGCCCCGACCAAATCGAGCCA
TACACATTGACACCTCCGTCATGTAATGGAAAAGGACCGCCCATGTTTGT
ATCACCCACCAAAAACAATGAGATCATTCATTTTGAATGCACTACTGAGG
AAATGAAACGACAGTTCGAGCCACCCTGTACAAAAAGTTCAGCCGAGAAG
CAACAAAAGTGTGGGAAACTTGGAAAGCCTATTCAAATACAAGCCAATCA
CTTTCCTTTGGATATCAAGATTCCAAATGGCGATATTTACCATTATGACG
TGACATTTATCCNCTAGGGCTAATTCAATTCTCAAtctaatttgattttg
ttggtGTTAGTAATGGTATAACTTTTTCGGCCAATCATTATTATATATTA
CCTATTTTCCTAAATTGCCATTAAAGTCATACAATTGGAATTACTAACAC
TAACAAAGTCTAACTAGATTGAAAATTGAAGTAGGGAACATAAAATTGTA
ATGGAAAGATAAATAAATCTTGATATTGACAAAACATGAGCTGTTAGAAA
CGAACAACTGAGGAAATCTGTGAGTAATTTATGTTTGAGTTGTGCCTTAA
TAAACTAACCTCTGAGTTTCCCAGAAAAATATCTTCAATTGAACAGGCTC
TAAAAGCTTAATTAGCATTTTAAatcattgtcaatttttctttctttaga
tATCAACCATGGTGAAAGGAGGCCGTAAAATACGCCCCGACCAAATCGAG
CCATACACATTGACACCTCCGTCATGTAATGGAAAAGGACCGCCCATGTT
TGCATCACCCACCAAAAACAATGAGATGATTCATTTTGAATGCACTACTG
AGGAAATGAAACGACAGTTCGAGCCACCCTGTACAAAAAGTTCAGCCGAG
AAGCAACAAAAGTGTGGGAAACTTGGAAAGCCTATTCAAATACAAGCCAA
TCACTTTCCTTTGGATATCAAGATTCCAAATGGCGATATTTACCATTATG
ACGTGACATTTATCCTTCCAAACAAGGCAGAGGTGAAAAAATCACATAAA
TCTCTATTGATCAAAGTCATTGAAAAAGTTAAAGAACAATATCAGAGTAC
TCTTGGTAATccaaattctattgtttttgacGGACTGAAAAATCTGTATT
CGAATAGAGAATTGTTCCAGGGACTCTTTGAAGGAACTGTGAAAATAAAC
GATGGTAAAGATTCACCCCGCTTTATTGAAGTTGGTGTCAGACTCAAAAG
GGTTGGCAATAGTTTGCCAGTGAACTATATGGTGAGTCAATACCTCCAAT
CAGGAAGGAAAGGAGCTGCTATTCATGATTCGTTGCAAGTTTTGAATATC
ATTCTTGGAATGACACCTTTGTTACATTACGAATGTGTTGGACGGACACA
TTTCAACCCATGTACAGGAAATGGATCCATCCTGGAGATCGGTCATGGTA
AATCGATCTGGGTTGGCACCTTTCAATCTGCTCGAATCGGATGGAAACCA
TTTCTCAACATTGCCGTCGCCAACCGACCTGCATATAACCAGCAGCCTGT
CATCCAGTTTTTAATGTCAGTCCTCAGCAGCAAAGATCCCAGATGTCTGT
CTAATCTTCACCCGAAAGATAAAACGAAATTAGATCGTGAAATCAAACAA
TTAAAAGTTCGCTTTACCAGACCGGATGGACAGAAAAGGGAATATCGTGT
GAACAAACTCGTCGACAGTGCAGAACGTTTGTCTCTGGATATCNATAAAA
CGAAATTAGATCGTGAAATCAAACAGTTAAAAGTTCGCTTTACCAGACCG
GATGGACAGAAAAGGGAATATCGTGTGAACAAACTCGTCGACAGTGCAGA
ACGTTTATCTCTGGATATGGATTCGCCAGATGGAGGAAAGCGAAAGACCA
CAATTCAACAgtacttcaaaaatcaatacaAATGCAACTTAAAATATCCT
TCGTTACCATGCGCTCATGTTGGTCCTCCCAAGGGAACAATTTACCTTCC
AATCGAGTTTTTGGAGATCAAGAAACAACTAGCTCCAACCACCAAAAAGT
TATCCGAGGACGAAACTGCCGAAATGATCAAACAAACAGCTCTGCAACCC
AACATCAGAAAACAACGTATCCAAAGAAACTTAAGAGAACTGAAAAACTC
TTTTAAAGATGACCCATACGCTAAAGCCTTCGGTTTAGAGATCAACGACA
AAATGGCGGAAATGCGTGGACGAGTCTTGGATGCTCCCTCCATCAAGTAC
AAGAAAGGTAGCAAAGTCAGCGAGTGTCGACACACGGGTGGTAAATGGAA
TATGACCAGCCAAGATCGAGTCGATCCCTTGAAATTTCTAGAAACCGTAT
CCCTCGGCAGATGGGGAGTTTTAGATCTTGCCGGACTTCCACCGCAACAA
AAGCAAGCTTTCGTGGATGCTGTGGCTATTGAAGCAGGACAACGAGGTCA
TCACATCGACTATCCGATCTACGATAAAGCTGACGTTAACAACCTCGAAG
ATGTCGAGAAAAGTTTCAAACGGCTTTGCATGCATATTCAACAACAGTGC
AACGGAAAACCCCAGCTTGTCCTTGTCATTGCCCCCTTCAAAGGAAACAT
CTATCCATGCATCAAATACATCGGTGACGCAGTAATGAACGTTCCAACGC
AATTCGTCCTCAAGAAAAACGTCCTCGGTAAGCCAAGACAAGGACCCAGC
GGTCAAACCATCCACAACTTGTGTTTGAAGTTGAACGCAAAAACAGGTGG
TACCAATCACGGTTTGTTCGTTCGACCTCCAGTGATGAAGAAACCGATCA
TTATCCTAGGTGCTGACGTCACTCATTCGGCGCCCAGCGAGTTCAAGAAG
CCTTCCATTGCAGCTATGGTGGGATCGTGCAACCCCGAAGCATCAGAATA
TTTCTGTGAAGTTCGCGTTCAAAAACAAGGCAAGGTAATGGAGGAGATCG
AAAAGACAGAGGAGATGGTCAAAAGTCTCCTTCAACGATTCAACGAGAAG
ACGCGCGTCAAACCGTTGAAGATCATCTACTATCGAGACGGTGTCAGTGA
AGGACAGTTCATTTCAGTATTGAATCACGAATTGACAGCCATTCGAAAAG
CATGCCTCAGTCTTCATCCTGACTACAAACCTGAAGTCACCTTCTTTGTC
GCACAGAAACGTCACAACACACGATTGTTTCCTTCAGATCCCAAAGATGG
CTTCGGTAAAGCGAGGAACGTACCTCCTGGAACAGTCATCGATACTATGA
TCACTCATCCCACCGAAACTGACTTCTTCTTGGCATCCCATGAGGGAATC
CAGGTAGGTCATTCTTTGTTAATTTTATAGCTAGTGAGCACTGTGTACTC
TATTCATCTATTGACTTGCACAAGGTTTTCTTGTCACTCAAAAGTCTTTC
AGTTACCAAAAATTGAGGAAGTTTTTCACAGATagacattttctttttct
ttttttatgaatgAATGGTTTGTTGTATGGATGTTCAATGTTATCTTTTT
CAGGGTACCACCAAACCAACGCACTACCATTTGCTTTGGGACGATAGCAA
CTTCTCCAATGACGAACTTCAAAGTCTGACCTACAATCTATGTCATCTTT
GCTCTCGCTGTGAACGAAGCGTTAGTTACCCAGCACCAACGTACTATGCG
CATTTGGCAGCCGCCCGTGCTCGTGAACATCACAATGCTCTGTTGCTTCG
TAACCGAAATCGTATTGATTTTATTCCAAAGGAGGACTTGAGAAAAATCG
AAAAGTGTactttattaaattattttatgtaaaaatctaattagaaagcc
aattttattttatcttaatttttttaatcaatttcacGAGCTTGACTATC
TCAATCATTAAATAAGGGAGCAGCCTCGTCCGTTTTCAGTCCCCAAAATT
TGCGGAGCATGATCATTTTGAACCGACATTTTATGGAATCGAGTTGAGTT
TTTTGATGAGATTCAgtttcttttaattttattttattagaaaagtatta
ttttattcttaaacatttttattttcagtaaaATTAATTGTAAGTGTTTC
AAGGCCGGTCCTTTCAATCGCTACTCAGTGGGAAACGGCACATATTTTTA
GTGCAGTCATTGCAAATCATAATTCATTCATTAGTCATCAACTTTTACAG
TGATTTTGGAATTTCCCTCTGTCCAAATTATTTGCAGACGTCAACTGAAA
AGCCCACTCATATTAGTCTCTTTGTAATTATCAAATTTTatattcaaaaa
tgaaaaataaggtATTTAATTATTGTAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070824TCONS_00070824Clytia hemisphaericatranscript
TCONS_00070825TCONS_00070825Clytia hemisphaericatranscript
TCONS_00070826TCONS_00070826Clytia hemisphaericatranscript
TCONS_00070827TCONS_00070827Clytia hemisphaericatranscript
TCONS_00070828TCONS_00070828Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070825-proteinTCONS_00070825-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:741242..750271 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21	0.07	0.15	0.04	1.52	1.16	0.78	1.7	1.63	13.89	12.19	4.7	23.44	18.87	12.51	14.18	2.45	7.95	24.27	30.1	4.7	5.88	2.02	2.59	454.22	230.14	23.41	37.62	35.38	23.87