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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070824 ID=TCONS_00070824|Name=TCONS_00070824|organism=Clytia hemisphaerica|type=transcript|length=3501bp
AACGAACTTCTTGAAAGTTCCgagaaaaagatcaaaacaaaaaaaaatct
gagAGAACAGCAAGTCACTGAGAAGTTTTGAAgttcaaacaagaaaaaat
tgtaaaaattaaagTAACAGatATCAACCATGGTGAAAGGAGGCCGTAAA
ATACGCCCCGACCAAATCGAGCCATACACATTGACACCTCCGTCATGTAA
TGGAAAAGGACCGCCCATGTTTGCATCACCCACCAAAAACAATGAGATGA
TTCATTTTGAATGCACTACTGAGGAAATGAAACGACAGTTCGAGCCACCC
TGTACAAAAAGTTCAGCCGAGAAGCAACAAAAGTGTGGGAAACTTGGAAA
GCCTATTCAAATACAAGCCAATCACTTTCCTTTGGATATCAAGATTCCAA
ATGGCGATATTTACCATTATGACGTGACATTTATCCTTCCAAACAAGGCA
GAGGTGAAAAAATCACATAAATCTCTATTGATCAAAGTCATTGAAAAAGT
TAAAGAACAATATCAGAGTACTCTTGGTAATccaaattctattgtttttg
acGGACTGAAAAATCTGTATTCGAATAGAGAATTGTTCCAGGGACTCTTT
GAAGGAACTGTGAAAATAAACGATGGTAAAGATTCACCCCGCTTTATTGA
AGTTGGTGTCAGACTCAAAAGGGTTGGCAATAGTTTGCCAGTGAACTATA
TGGTGAGTCAATACCTCCAATCAGGAAGGAAAGGAGCTGCTATTCATGAT
TCGTTGCAAGTTTTGAATATCATTCTTGGAATGACACCTTTGTTACATTA
CGAATGTGTTGGACGGACACATTTCAACCCATGTACAGGAAATGGATCCA
TCCTGGAGATCGGTCATGGTAAATCGATCTGGGTTGGCACCTTTCAATCT
GCTCGAATCGGATGGAAACCATTTCTCAACATTGCCGTCGCCAACCGACC
TGCATATAACCAGCAGCCTGTCATCCAGTTTTTAATGTCAGTCCTCAGCA
GCAAAGATCCCAGATGTCTGTCTAATCTTCACCCGAAAGATAAAACGAAA
TTAGATCGTGAAATCAAACAATTAAAAGTTCGCTTTACCAGACCGGATGG
ACAGAAAAGGGAATATCGTGTGAACAAACTCGTCGACAGTGCAGAACGTT
TGTCTCTGGATATCNATAAAACGAAATTAGATCGTGAAATCAAACAGTTA
AAAGTTCGCTTTACCAGACCGGATGGACAGAAAAGGGAATATCGTGTGAA
CAAACTCGTCGACAGTGCAGAACGTTTATCTCTGGATATGGATTCGCCAG
ATGGAGGAAAGCGAAAGACCACAATTCAACAgtacttcaaaaatcaatac
aAATGCAACTTAAAATATCCTTCGTTACCATGCGCTCATGTTGGTCCTCC
CAAGGGAACAATTTACCTTCCAATCGAGTTTTTGGAGATCAAGAAACAAC
TAGCTCCAACCACCAAAAAGTTATCCGAGGACGAAACTGCCGAAATGATC
AAACAAACAGCTCTGCAACCCAACATCAGAAAACAACGTATCCAAAGAAA
CTTAAGAGAACTGAAAAACTCTTTTAAAGATGACCCATACGCTAAAGCCT
TCGGTTTAGAGATCAACGACAAAATGGCGGAAATGCGTGGACGAGTCTTG
GATGCTCCCTCCATCAAGTACAAGAAAGGTAGCAAAGTCAGCGAGTGTCG
ACACACGGGTGGTAAATGGAATATGACCAGCCAAGATCGAGTCGATCCCT
TGAAATTTCTAGAAACCGTATCCCTCGGCAGATGGGGAGTTTTAGATCTT
GCCGGACTTCCACCGCAACAAAAGCAAGCTTTCGTGGATGCTGTGGCTAT
TGAAGCAGGACAACGAGGTCATCACATCGACTATCCGATCTACGATAAAG
CTGACGTTAACAACCTCGAAGATGTCGAGAAAAGTTTCAAACGGCTTTGC
ATGCATATTCAACAACAGTGCAACGGAAAACCCCAGCTTGTCCTTGTCAT
TGCCCCCTTCAAAGGAAACATCTATCCATGCATCAAATACATCGGTGACG
CAGTAATGAACGTTCCAACGCAATTCGTCCTCAAGAAAAACGTCCTCGGT
AAGCCAAGACAAGGACCCAGCGGTCAAACCATCCACAACTTGTGTTTGAA
GTTGAACGCAAAAACAGGTGGTACCAATCACGGTTTGTTCGTTCGACCTC
CAGTGATGAAGAAACCGATCATTATCCTAGGTGCTGACGTCACTCATTCG
GCGCCCAGCGAGTTCAAGAAGCCTTCCATTGCAGCTATGGTGGGATCGTG
CAACCCCGAAGCATCAGAATATTTCTGTGAAGTTCGCGTTCAAAAACAAG
GCAAGGTAATGGAGGAGATCGAAAAGACAGAGGAGATGGTCAAAAGTCTC
CTTCAACGATTCAACGAGAAGACGCGCGTCAAACCGTTGAAGATCATCTA
CTATCGAGACGGTGTCAGTGAAGGACAGTTCATTTCAGTATTGAATCACG
AATTGACAGCCATTCGAAAAGCATGCCTCAGTCTTCATCCTGACTACAAA
CCTGAAGTCACCTTCTTTGTCGCACAGAAACGTCACAACACACGATTGTT
TCCTTCAGATCCCAAAGATGGCTTCGGTAAAGCGAGGAACGTACCTCCTG
GAACAGTCATCGATACTATGATCACTCATCCCACCGAAACTGACTTCTTC
TTGGCATCCCATGAGGGAATCCAGGGTACCACCAAACCAACGCACTACCA
TTTGCTTTGGGACGATAGCAACTTCTCCAATGACGAACTTCAAAGTCTGA
CCTACAATCTATGTCATCTTTGCTCTCGCTGTGAACGAAGCGTTAGTTAC
CCAGCACCAACGTACTATGCGCATTTGGCAGCCGCCCGTGCTCGTGAACA
TCACAATGCTCTGTTGCTTCGTAACCGAAATCGTATTGATTTTATTCCAA
AGGAGGACTTGAGAAAAATCGAAAAGTGTactttattaaattattttatg
taaaaatctaattagaaagccaattttattttatcttaatttttttaatc
aatttcacGAGCTTGACTATCTCAATCATTAAATAAGGGAGCAGCCTCGT
CCGTTTTCAGTCCCCAAAATTTGCGGAGCATGATCATTTTGAACCGACAT
TTTATGGAATCGAGTTGAGTTTTTTGATGAGATTCAgtttcttttaattt
tattttattagaaaagtattattttattcttaaacatttttattttcagt
aaaATTAATTGTAAGTGTTTCAAGGCCGGTCCTTTCAATCGCTACTCAGT
GGGAAACGGCACATATTTTTAGTGCAGTCATTGCAAATCATAATTCATTC
ATTAGTCATCAACTTTTACAGTGATTTTGGAATTTCCCTCTGTCCAAATT
ATTTGCAGACGTCAACTGAAAAGCCCACTCATATTAGTCTCTTTGTAATT
ATCAAATTTTatattcaaaaatgaaaaataaggtATTTAATTATTGTAAA
G Run BLAST on NCBI transcript from alignment at scaffold_58:741242..750271+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070824 ID=TCONS_00070824|Name=TCONS_00070824|organism=Clytia hemisphaerica|type=transcript|length=9030bp|location=Sequence derived from alignment at scaffold_58:741242..750271+ (Clytia hemisphaerica)
AACGAACTTCTTGAAAGTTCCgagaaaaagatcaaaacaaaaaaaaatct
gagAGAACAGCAAGTCACTGAGAAGTTTTGAAgttcaaacaagaaaaaat
tgtaaaaattaaagTAACAGGTATGTTTTCCATTCTACTTCTGTAACGTA
TATGTATTTTCGTATATGTTTTGATTTGCtttctctctttgaaaacaAAG
TATTGAGATAGCACAACAAAATTATAATCATTCTAAAAGATAGAAAGTAA
AAACTGTACGTatattttttttcctatttttctctgttatttttttgtga
atttgtCTTTCATCTTCAGAGGTTTTGGGTTTCATCTTCAAAGGTTTTTG
TATACATCAAACCAGGGCTtatcaatcaaaaaatattgaacttgATTCCT
GATCATAATCGGACACGATCAATAATATGAGACCAATTTTGGCCTACTTG
TGGACATTGATACCATGTGTTAAacttttatcaattatttgaaCATAGTG
AATATTGACAAATATCAGTGGAtatgttatcttcaaaaattgataaatct
tTAACACTGTTGAGATCCTGTGTCACAATGATCAAATCAAGACAACTTAT
TTACACCTAAAGTGAtgacaaaaaaatgataaaaaattaacaaggtctat
tttttggaaatgataaaaaatagtctaaaactttaatttaaccttgaaat
tgaaaatcctttggacagaccaaaaatatgataattttttatcaaacttg
ACAGGTTTCAggctcaaaaacaatgaaatgataattttttaacaGATTGA
AGTTCANNTCGTTTATTTTTaactctttgttttgatacaTATCTCTTTAA
ACTATACGCAGAACTACAATTTCGAATAACTTGaacaaaaatagataaaa
acttAACCAAAACTGTACTTGTAAATATTACACTAATTAAGTTTAAACNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCGACCCATgacaattaaaattcagaaact
tattaacaaaacaaatttttggacaattttatgATGTCCACAATGGTGTC
TCATATTATTGATCGTGTCCAATCTCGAAAGTTATTGACCCCATCCAGCC
AGTCACATTTCACCAGCCATTTAAGGCAAGTACGATGGATAATAACTAAT
TACAacatcataatttttttctcgtctgattgattcaattgatttgtctt
ttaaaCAACTGTTGCCTATACAAAAAAACTTATGTCTTTTGTTCTGGCTT
GTACTACACGCTGTACTAATTTCTTATATTCAATAGTAGTTTAGGATAac
ggtctattgaataacaaataaCTCAAGCCAGTACAAATTGGGTAAATTAT
CTTGTACCTaggtagcctggagatccatgctatgatttcttattctatat
actgatggcgaaatatatagcatggtatgggctgacagtttgaatttccc
atatcctaataacggttgaaaacacagccaatcaaatcctgttattgttt
cactggtcaaactttcttaaagaaagcgcaagttccgaaatttggttttt
attttagtaagtgaggacagcgctaaattcgaatttcccactgtaatttt
ttttaggccaaaaccagactcacagctctgacccgtcaagtattcatcag
atttaaaaaaaatacgcagacgggttcctgtctaGTACCTAGATAACAAC
AGCTGTGTTGTGAAAAACCAATTATTTGATGTTATCATTAAAAAAGATTC
TGCTGGAGTAAtcagttattcaaaagactgtcaGGTTCTCCCAAAGGACC
ATATATCATTACATTCCCTTCCCTTAAAGGTCTATCAAGTCATGATTGAA
ACTGAAAAAACTATATTTGATTGAGCTCTATCAAAATCCAATGAACTTAA
GCTGACTTAAATTGTTCAATTAACATTTGGttgaatcaaattttttcctA
ATCATGTTGTCCTCGGTCAATTTACTGtaaggcatgtccaaatttttcaa
atttaccttAATTTCTTATTACCATTTCCACTTGTCGAATCATATCACTT
CGTACATTGAAAGAAGCAtattggagtgtagatcactaAAATGGCTGTGC
cataattaaatttttcacccaaaaaaatattacgTAAAAaccaaaaactg
ctgacgttatcccagtgatctacactccaatacACTTCTTCCAAAATGTA
TGAATTGACATGATATGACCAGTGGAAAATGTGATAAAAAATTTGGAAGT
GCCTTAAGTTGCTCTAAAGTCATGtttaataattaaaatactTCAACATA
AATTGCGGTTGAGAGAATATTTCATGTATGATATGGCCTTTTTGCCCTAA
AAGTAGCACTTTTAGGGTTGACTTTTCAAATCCTGAGAATTTTTGTGTTA
TACGGAATAAAATTTTGCAGGTatgcagaatttaattttgcggatttaaa
ttaaattccgcaaaaattgttccacaaaaatttcttcccttaaggtacat
tAGGCCTGATtagttcaaaaaaaatttagtgCATAAAAAGagatcaattt
ttttaaacagtttgtgaacatttagagaatttatttttcaatttttactg
aTGATAGTAATCGAAAGACACTGAAACGTCTAAAATATatgtattttaaa
ttttattcaaataaaatgaaaatgcttctgTGCTTGAACTTCACATTGAA
AATATTCAGGAGGACCAATCAATTTAAGGATACATTAAGCAAGCatgaac
ttttaatttttttacaaattttagccttttgtttcaaaagtaaatgtctt
GAAAATTCATCCTAGGGCTAATTCAATTCTCAAtctaatttgattttgtt
ggtGTTAGTAATGGTATAACTTTTTCGGCcaattattattatatattacC
TATTTTCCTAAATTGCCATTAAAGTCATACAATTACTAACACTAACAAAG
TCTAACTAGATTGAAAATTGAAGTATGGAACATAAAATTGTAATGGAAAG
ATAAATGAATCTTGATATTGACAAAACATGAACTGTTAGAAACGAACAAC
TGAGGAAATCTGTGAGTAATTTATGTTTGAGTTGTGCCTTAATAAACTAC
AGTAACCTCTGAGTCTTCCAGAAAAATACCTTCAATTGAACAGGCTCTAA
AAGCTTAATTAGCATTTTAAATCATTGCcaacttttctttctttagaTAT
CAACCATGGTGAAAGGAGGCCGTAAAATACGCCCCGACCAAATCGAGCCA
TACACATTGACACCTCCGTCATGTAATGGAAAAGGACCGCCCATGTTTGT
ATCACCCACCAAAAACAATGAGATCATTCATTTTGAATGCACTACTGAGG
AAATGAAACGACAGTTCGAGCCACCCTGTACAAAAAGTTCAGCCGAGAAG
CAACAAAAGTGTGGGAAACTTGGAAAGCCTATTCAAATACAAGCCAATCA
CTTTCCTTTGGATATCAAGATTCCAAATGGCGATATTTACCATTATGACG
TGACATTTATCCNCTAGGGCTAATTCAATTCTCAAtctaatttgattttg
ttggtGTTAGTAATGGTATAACTTTTTCGGCCAATCATTATTATATATTA
CCTATTTTCCTAAATTGCCATTAAAGTCATACAATTGGAATTACTAACAC
TAACAAAGTCTAACTAGATTGAAAATTGAAGTAGGGAACATAAAATTGTA
ATGGAAAGATAAATAAATCTTGATATTGACAAAACATGAGCTGTTAGAAA
CGAACAACTGAGGAAATCTGTGAGTAATTTATGTTTGAGTTGTGCCTTAA
TAAACTAACCTCTGAGTTTCCCAGAAAAATATCTTCAATTGAACAGGCTC
TAAAAGCTTAATTAGCATTTTAAatcattgtcaatttttctttctttaga
tATCAACCATGGTGAAAGGAGGCCGTAAAATACGCCCCGACCAAATCGAG
CCATACACATTGACACCTCCGTCATGTAATGGAAAAGGACCGCCCATGTT
TGCATCACCCACCAAAAACAATGAGATGATTCATTTTGAATGCACTACTG
AGGAAATGAAACGACAGTTCGAGCCACCCTGTACAAAAAGTTCAGCCGAG
AAGCAACAAAAGTGTGGGAAACTTGGAAAGCCTATTCAAATACAAGCCAA
TCACTTTCCTTTGGATATCAAGATTCCAAATGGCGATATTTACCATTATG
ACGTGACATTTATCCTTCCAAACAAGGCAGAGGTGAAAAAATCACATAAA
TCTCTATTGATCAAAGTCATTGAAAAAGTTAAAGAACAATATCAGAGTAC
TCTTGGTAATccaaattctattgtttttgacGGACTGAAAAATCTGTATT
CGAATAGAGAATTGTTCCAGGGACTCTTTGAAGGAACTGTGAAAATAAAC
GATGGTAAAGATTCACCCCGCTTTATTGAAGTTGGTGTCAGACTCAAAAG
GGTTGGCAATAGTTTGCCAGTGAACTATATGGTGAGTCAATACCTCCAAT
CAGGAAGGAAAGGAGCTGCTATTCATGATTCGTTGCAAGTTTTGAATATC
ATTCTTGGAATGACACCTTTGTTACATTACGAATGTGTTGGACGGACACA
TTTCAACCCATGTACAGGAAATGGATCCATCCTGGAGATCGGTCATGGTA
AATCGATCTGGGTTGGCACCTTTCAATCTGCTCGAATCGGATGGAAACCA
TTTCTCAACATTGCCGTCGCCAACCGACCTGCATATAACCAGCAGCCTGT
CATCCAGTTTTTAATGTCAGTCCTCAGCAGCAAAGATCCCAGATGTCTGT
CTAATCTTCACCCGAAAGATAAAACGAAATTAGATCGTGAAATCAAACAA
TTAAAAGTTCGCTTTACCAGACCGGATGGACAGAAAAGGGAATATCGTGT
GAACAAACTCGTCGACAGTGCAGAACGTTTGTCTCTGGATATCNATAAAA
CGAAATTAGATCGTGAAATCAAACAGTTAAAAGTTCGCTTTACCAGACCG
GATGGACAGAAAAGGGAATATCGTGTGAACAAACTCGTCGACAGTGCAGA
ACGTTTATCTCTGGATATGGATTCGCCAGATGGAGGAAAGCGAAAGACCA
CAATTCAACAgtacttcaaaaatcaatacaAATGCAACTTAAAATATCCT
TCGTTACCATGCGCTCATGTTGGTCCTCCCAAGGGAACAATTTACCTTCC
AATCGAGTTTTTGGAGATCAAGAAACAACTAGCTCCAACCACCAAAAAGT
TATCCGAGGACGAAACTGCCGAAATGATCAAACAAACAGCTCTGCAACCC
AACATCAGAAAACAACGTATCCAAAGAAACTTAAGAGAACTGAAAAACTC
TTTTAAAGATGACCCATACGCTAAAGCCTTCGGTTTAGAGATCAACGACA
AAATGGCGGAAATGCGTGGACGAGTCTTGGATGCTCCCTCCATCAAGTAC
AAGAAAGGTAGCAAAGTCAGCGAGTGTCGACACACGGGTGGTAAATGGAA
TATGACCAGCCAAGATCGAGTCGATCCCTTGAAATTTCTAGAAACCGTAT
CCCTCGGCAGATGGGGAGTTTTAGATCTTGCCGGACTTCCACCGCAACAA
AAGCAAGCTTTCGTGGATGCTGTGGCTATTGAAGCAGGACAACGAGGTCA
TCACATCGACTATCCGATCTACGATAAAGCTGACGTTAACAACCTCGAAG
ATGTCGAGAAAAGTTTCAAACGGCTTTGCATGCATATTCAACAACAGTGC
AACGGAAAACCCCAGCTTGTCCTTGTCATTGCCCCCTTCAAAGGAAACAT
CTATCCATGCATCAAATACATCGGTGACGCAGTAATGAACGTTCCAACGC
AATTCGTCCTCAAGAAAAACGTCCTCGGTAAGCCAAGACAAGGACCCAGC
GGTCAAACCATCCACAACTTGTGTTTGAAGTTGAACGCAAAAACAGGTGG
TACCAATCACGGTTTGTTCGTTCGACCTCCAGTGATGAAGAAACCGATCA
TTATCCTAGGTGCTGACGTCACTCATTCGGCGCCCAGCGAGTTCAAGAAG
CCTTCCATTGCAGCTATGGTGGGATCGTGCAACCCCGAAGCATCAGAATA
TTTCTGTGAAGTTCGCGTTCAAAAACAAGGCAAGGTAATGGAGGAGATCG
AAAAGACAGAGGAGATGGTCAAAAGTCTCCTTCAACGATTCAACGAGAAG
ACGCGCGTCAAACCGTTGAAGATCATCTACTATCGAGACGGTGTCAGTGA
AGGACAGTTCATTTCAGTATTGAATCACGAATTGACAGCCATTCGAAAAG
CATGCCTCAGTCTTCATCCTGACTACAAACCTGAAGTCACCTTCTTTGTC
GCACAGAAACGTCACAACACACGATTGTTTCCTTCAGATCCCAAAGATGG
CTTCGGTAAAGCGAGGAACGTACCTCCTGGAACAGTCATCGATACTATGA
TCACTCATCCCACCGAAACTGACTTCTTCTTGGCATCCCATGAGGGAATC
CAGGTAGGTCATTCTTTGTTAATTTTATAGCTAGTGAGCACTGTGTACTC
TATTCATCTATTGACTTGCACAAGGTTTTCTTGTCACTCAAAAGTCTTTC
AGTTACCAAAAATTGAGGAAGTTTTTCACAGATagacattttctttttct
ttttttatgaatgAATGGTTTGTTGTATGGATGTTCAATGTTATCTTTTT
CAGGGTACCACCAAACCAACGCACTACCATTTGCTTTGGGACGATAGCAA
CTTCTCCAATGACGAACTTCAAAGTCTGACCTACAATCTATGTCATCTTT
GCTCTCGCTGTGAACGAAGCGTTAGTTACCCAGCACCAACGTACTATGCG
CATTTGGCAGCCGCCCGTGCTCGTGAACATCACAATGCTCTGTTGCTTCG
TAACCGAAATCGTATTGATTTTATTCCAAAGGAGGACTTGAGAAAAATCG
AAAAGTGTactttattaaattattttatgtaaaaatctaattagaaagcc
aattttattttatcttaatttttttaatcaatttcacGAGCTTGACTATC
TCAATCATTAAATAAGGGAGCAGCCTCGTCCGTTTTCAGTCCCCAAAATT
TGCGGAGCATGATCATTTTGAACCGACATTTTATGGAATCGAGTTGAGTT
TTTTGATGAGATTCAgtttcttttaattttattttattagaaaagtatta
ttttattcttaaacatttttattttcagtaaaATTAATTGTAAGTGTTTC
AAGGCCGGTCCTTTCAATCGCTACTCAGTGGGAAACGGCACATATTTTTA
GTGCAGTCATTGCAAATCATAATTCATTCATTAGTCATCAACTTTTACAG
TGATTTTGGAATTTCCCTCTGTCCAAATTATTTGCAGACGTCAACTGAAA
AGCCCACTCATATTAGTCTCTTTGTAATTATCAAATTTTatattcaaaaa
tgaaaaataaggtATTTAATTATTGTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070824-exon-scaffold_58-1491911889:741242..741361 | TCONS_00070824-exon-scaffold_58-1491911889:741242..741361 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1510915933:741242..741361 | TCONS_00070824-exon-scaffold_58-1510915933:741242..741361 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1575043694:741242..741361 | TCONS_00070824-exon-scaffold_58-1575043694:741242..741361 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1491911889:746691..749294 | TCONS_00070824-exon-scaffold_58-1491911889:746691..749294 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1510915933:746691..749294 | TCONS_00070824-exon-scaffold_58-1510915933:746691..749294 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1575043694:746691..749294 | TCONS_00070824-exon-scaffold_58-1575043694:746691..749294 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1491911889:749495..750271 | TCONS_00070824-exon-scaffold_58-1491911889:749495..750271 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1510915933:749495..750271 | TCONS_00070824-exon-scaffold_58-1510915933:749495..750271 | Clytia hemisphaerica | exon |
| TCONS_00070824-exon-scaffold_58-1575043694:749495..750271 | TCONS_00070824-exon-scaffold_58-1575043694:749495..750271 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:741242..750271 + |
Blast
BLAST of TCONS_00070824 vs. Swiss-Prot (Human)
Match: AGO2 (Protein argonaute-2 OS=Homo sapiens GN=AGO2 PE=1 SV=3) HSP 1 Score: 490.345 bits (1261), Expect = 1.335e-155 Identity = 315/853 (36.93%), Postives = 450/853 (52.75%), Query Frame = 1
Query: 337 GKLGKPIQIQANHFPLDIKIPNGDIYHYDVTFILPNKAEVKKSHKSLLIKVIEKVKEQYQSTLGNPNSIVFDGLKNLYSNRELFQGLFEGTVKIN---DGKDSPRFIEVGVRLKRVGNSLPVNYMVSQYLQSGRKGAAIHDSLQVLNIILGMTPLLHYECVGRTHFNPCTGNGSILEIGHGKSIWVGTFQSARIG-WKPFLNIAVANRPAYNQQPVIQFLMSVLSSKDPRCLSNLHPKDKTKLDREIKQLKVRFTRPDGQKREYRVNKLVDSAERLSLDIXKTKLDREIKQLKVRFTRPDGQKREYRV-NKLVDSAERLSLDMDSPDGGKRKTTIQQYFKNQYKCNLKYPSLPCAHVGPPKGTIYLPIEFLEIKKQLAPTTKKLSEDETAEMIKQTALQPNIRKQRIQRNLRELKNSFKDDPYAKAFGLEINDKMAEMRGRVLDAPSIKYKKGSKVSECRHTGGKWNMTSQDRVDPLKFLETVSLGRWGVLDLAGLPPQQKQAFVDAVAIEAGQRGHHID--YPIYDKADVNNLEDVEKSFKRLCMHIQQQCNGKPQLVLVIAPFKGNIYPCIKYIGDAVMNVPTQFVLKKNVLGKPRQGPSGQTIHNLCLKLNAKTGGTNHGLFV--RPPVMKKPIIILGADVTHSAPSEFKKPSIAAMVGSCNPEASEYFCEVRVQKQGKVMEEIEKTEEMVKSLLQRFNEKTRVKPLKIIYYRDGVSEGQFISVLNHELTAIRKACLSLHPDYKPEVTFFVAQKRHNTRLFPSDPKDGFGKARNVPPGTVIDTMITHPTETDFFLASHEGIQGTTKPTHYHLLWDDSNFSNDELQSLTYNLCHLCSRCERSVSYPAPTYY 2868
G G+ I++QAN F +DI P DIYHY++ I P K + + + ++E + + +++ + VFDG KNLY+ L G + +++ +GKD R +V ++ V+ SGR + +++Q L++++ P + Y VGR+ F G + L G G+ +W G QS R WK LNI V+ Y QPVI+F+ VL K ++ ++ D + K +EIK LKV T KR+YRV N A + + G + T+ QYFK+++K L+YP LPC VG + YLP+E I KKL++++T+ MI+ TA R++ I + +R SF DPY + FG+ + D+M ++ GRVL PSI Y G + G W+M ++ +F + + W + A PQ++ V + R D PI + S + + H++ G QLV+VI P K +Y +K +GD V+ + TQ V KNV Q + QT+ NLCLK+N K GG N+ L RPPV ++P+I LGADVTH + KKPSIAA+VGS + + Y VRVQ+ + E I+ MV+ LL +F + TR KP +II+YRDGVSEGQF VL+HEL AIR+AC+ L DY+P +TF V QKRH+TRLF +D + GK+ N+P GT +DT ITHPTE DF+L SH GIQGT++P+HYH+LWDD+ FS+DELQ LTY LCH RC RSVS PAP YY
Sbjct: 32 GTSGRTIKLQANFFEMDI--PKIDIYHYELD-IKPEKCPRRVNRE-----IVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD--RIFKVSIKWVSC-----VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPL--GGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKS-----------------------------------------IEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQEQKHTYLPLEVCNIVAG-QRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRS--ASFNTDPYVREFGIMVKDEMTDVTGRVLQPPSILYG-GRNKAIATPVQGVWDMRNK------QFHTGIEIKVWAI---ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGL-QLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNV-----QRTTPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPNRYCATVRVQQHRQ--EIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYY 805
The following BLAST results are available for this feature:
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