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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070826 ID=TCONS_00070826|Name=TCONS_00070826|organism=Clytia hemisphaerica|type=transcript|length=3434bp
TTGAGATAGCACAACAAAATTATAATCATTCTAAAAGATAGAAAGTAAAA
ACTatATCAACCATGGTGAAAGGAGGCCGTAAAATACGCCCCGACCAAAT
CGAGCCATACACATTGACACCTCCGTCATGTAATGGAAAAGGACCGCCCA
TGTTTGCATCACCCACCAAAAACAATGAGATGATTCATTTTGAATGCACT
ACTGAGGAAATGAAACGACAGTTCGAGCCACCCTGTACAAAAAGTTCAGC
CGAGAAGCAACAAAAGTGTGGGAAACTTGGAAAGCCTATTCAAATACAAG
CCAATCACTTTCCTTTGGATATCAAGATTCCAAATGGCGATATTTACCAT
TATGACGTGACATTTATCCTTCCAAACAAGGCAGAGGTGAAAAAATCACA
TAAATCTCTATTGATCAAAGTCATTGAAAAAGTTAAAGAACAATATCAGA
GTACTCTTGGTAATccaaattctattgtttttgacGGACTGAAAAATCTG
TATTCGAATAGAGAATTGTTCCAGGGACTCTTTGAAGGAACTGTGAAAAT
AAACGATGGTAAAGATTCACCCCGCTTTATTGAAGTTGGTGTCAGACTCA
AAAGGGTTGGCAATAGTTTGCCAGTGAACTATATGGTGAGTCAATACCTC
CAATCAGGAAGGAAAGGAGCTGCTATTCATGATTCGTTGCAAGTTTTGAA
TATCATTCTTGGAATGACACCTTTGTTACATTACGAATGTGTTGGACGGA
CACATTTCAACCCATGTACAGGAAATGGATCCATCCTGGAGATCGGTCAT
GGTAAATCGATCTGGGTTGGCACCTTTCAATCTGCTCGAATCGGATGGAA
ACCATTTCTCAACATTGCCGTCGCCAACCGACCTGCATATAACCAGCAGC
CTGTCATCCAGTTTTTAATGTCAGTCCTCAGCAGCAAAGATCCCAGATGT
CTGTCTAATCTTCACCCGAAAGATAAAACGAAATTAGATCGTGAAATCAA
ACAATTAAAAGTTCGCTTTACCAGACCGGATGGACAGAAAAGGGAATATC
GTGTGAACAAACTCGTCGACAGTGCAGAACGTTTGTCTCTGGATATCNAT
AAAACGAAATTAGATCGTGAAATCAAACAGTTAAAAGTTCGCTTTACCAG
ACCGGATGGACAGAAAAGGGAATATCGTGTGAACAAACTCGTCGACAGTG
CAGAACGTTTATCTCTGGATATGGATTCGCCAGATGGAGGAAAGCGAAAG
ACCACAATTCAACAgtacttcaaaaatcaatacaAATGCAACTTAAAATA
TCCTTCGTTACCATGCGCTCATGTTGGTCCTCCCAAGGGAACAATTTACC
TTCCAATCGAGTTTTTGGAGATCAAGAAACAACTAGCTCCAACCACCAAA
AAGTTATCCGAGGACGAAACTGCCGAAATGATCAAACAAACAGCTCTGCA
ACCCAACATCAGAAAACAACGTATCCAAAGAAACTTAAGAGAACTGAAAA
ACTCTTTTAAAGATGACCCATACGCTAAAGCCTTCGGTTTAGAGATCAAC
GACAAAATGGCGGAAATGCGTGGACGAGTCTTGGATGCTCCCTCCATCAA
GTACAAGAAAGGTAGCAAAGTCAGCGAGTGTCGACACACGGGTGGTAAAT
GGAATATGACCAGCCAAGATCGAGTCGATCCCTTGAAATTTCTAGAAACC
GTATCCCTCGGCAGATGGGGAGTTTTAGATCTTGCCGGACTTCCACCGCA
ACAAAAGCAAGCTTTCGTGGATGCTGTGGCTATTGAAGCAGGACAACGAG
GTCATCACATCGACTATCCGATCTACGATAAAGCTGACGTTAACAACCTC
GAAGATGTCGAGAAAAGTTTCAAACGGCTTTGCATGCATATTCAACAACA
GTGCAACGGAAAACCCCAGCTTGTCCTTGTCATTGCCCCCTTCAAAGGAA
ACATCTATCCATGCATCAAATACATCGGTGACGCAGTAATGAACGTTCCA
ACGCAATTCGTCCTCAAGAAAAACGTCCTCGGTAAGCCAAGACAAGGACC
CAGCGGTCAAACCATCCACAACTTGTGTTTGAAGTTGAACGCAAAAACAG
GTGGTACCAATCACGGTTTGTTCGTTCGACCTCCAGTGATGAAGAAACCG
ATCATTATCCTAGGTGCTGACGTCACTCATTCGGCGCCCAGCGAGTTCAA
GAAGCCTTCCATTGCAGCTATGGTGGGATCGTGCAACCCCGAAGCATCAG
AATATTTCTGTGAAGTTCGCGTTCAAAAACAAGGCAAGGTAATGGAGGAG
ATCGAAAAGACAGAGGAGATGGTCAAAAGTCTCCTTCAACGATTCAACGA
GAAGACGCGCGTCAAACCGTTGAAGATCATCTACTATCGAGACGGTGTCA
GTGAAGGACAGTTCATTTCAGTATTGAATCACGAATTGACAGCCATTCGA
AAAGCATGCCTCAGTCTTCATCCTGACTACAAACCTGAAGTCACCTTCTT
TGTCGCACAGAAACGTCACAACACACGATTGTTTCCTTCAGATCCCAAAG
ATGGCTTCGGTAAAGCGAGGAACGTACCTCCTGGAACAGTCATCGATACT
ATGATCACTCATCCCACCGAAACTGACTTCTTCTTGGCATCCCATGAGGG
AATCCAGGGTACCACCAAACCAACGCACTACCATTTGCTTTGGGACGATA
GCAACTTCTCCAATGACGAACTTCAAAGTCTGACCTACAATCTATGTCAT
CTTTGCTCTCGCTGTGAACGAAGCGTTAGTTACCCAGCACCAACGTACTA
TGCGCATTTGGCAGCCGCCCGTGCTCGTGAACATCACAATGCTCTGTTGC
TTCGTAACCGAAATCGTATTGATTTTATTCCAAAGGAGGACTTGAGAAAA
ATCGAAAAGTGTactttattaaattattttatgtaaaaatctaattagaa
agccaattttattttatcttaatttttttaatcaatttcacGAGCTTGAC
TATCTCAATCATTAAATAAGGGAGCAGCCTCGTCCGTTTTCAGTCCCCAA
AATTTGCGGAGCATGATCATTTTGAACCGACATTTTATGGAATCGAGTTG
AGTTTTTTGATGAGATTCAgtttcttttaattttattttattagaaaagt
attattttattcttaaacatttttattttcagtaaaATTAATTGTAAGTG
TTTCAAGGCCGGTCCTTTCAATCGCTACTCAGTGGGAAACGGCACATATT
TTTAGTGCAGTCATTGCAAATCATAATTCATTCATTAGTCATCAACTTTT
ACAGTGATTTTGGAATTTCCCTCTGTCCAAATTATTTGCAGACGTCAACT
GAAAAGCCCACTCATATTAGTCTCTTTGTAATTATCAAATTTTatattca
aaaatgaaaaataaggtATTTAATTATTGTAAAG Run BLAST on NCBI transcript from alignment at scaffold_58:741444..750271+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070826 ID=TCONS_00070826|Name=TCONS_00070826|organism=Clytia hemisphaerica|type=transcript|length=8828bp|location=Sequence derived from alignment at scaffold_58:741444..750271+ (Clytia hemisphaerica)
TTGAGATAGCACAACAAAATTATAATCATTCTAAAAGATAGAAAGTAAAA
ACTGTACGTatattttttttcctatttttctctgttatttttttgtgaat
ttgtCTTTCATCTTCAGAGGTTTTGGGTTTCATCTTCAAAGGTTTTTGTA
TACATCAAACCAGGGCTtatcaatcaaaaaatattgaacttgATTCCTGA
TCATAATCGGACACGATCAATAATATGAGACCAATTTTGGCCTACTTGTG
GACATTGATACCATGTGTTAAacttttatcaattatttgaaCATAGTGAA
TATTGACAAATATCAGTGGAtatgttatcttcaaaaattgataaatcttT
AACACTGTTGAGATCCTGTGTCACAATGATCAAATCAAGACAACTTATTT
ACACCTAAAGTGAtgacaaaaaaatgataaaaaattaacaaggtctattt
tttggaaatgataaaaaatagtctaaaactttaatttaaccttgaaattg
aaaatcctttggacagaccaaaaatatgataattttttatcaaacttgAC
AGGTTTCAggctcaaaaacaatgaaatgataattttttaacaGATTGAAG
TTCANNTCGTTTATTTTTaactctttgttttgatacaTATCTCTTTAAAC
TATACGCAGAACTACAATTTCGAATAACTTGaacaaaaatagataaaaac
ttAACCAAAACTGTACTTGTAAATATTACACTAATTAAGTTTAAACNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCGACCCATgacaattaaaattcagaaactta
ttaacaaaacaaatttttggacaattttatgATGTCCACAATGGTGTCTC
ATATTATTGATCGTGTCCAATCTCGAAAGTTATTGACCCCATCCAGCCAG
TCACATTTCACCAGCCATTTAAGGCAAGTACGATGGATAATAACTAATTA
CAacatcataatttttttctcgtctgattgattcaattgatttgtctttt
aaaCAACTGTTGCCTATACAAAAAAACTTATGTCTTTTGTTCTGGCTTGT
ACTACACGCTGTACTAATTTCTTATATTCAATAGTAGTTTAGGATAacgg
tctattgaataacaaataaCTCAAGCCAGTACAAATTGGGTAAATTATCT
TGTACCTaggtagcctggagatccatgctatgatttcttattctatatac
tgatggcgaaatatatagcatggtatgggctgacagtttgaatttcccat
atcctaataacggttgaaaacacagccaatcaaatcctgttattgtttca
ctggtcaaactttcttaaagaaagcgcaagttccgaaatttggtttttat
tttagtaagtgaggacagcgctaaattcgaatttcccactgtaatttttt
ttaggccaaaaccagactcacagctctgacccgtcaagtattcatcagat
ttaaaaaaaatacgcagacgggttcctgtctaGTACCTAGATAACAACAG
CTGTGTTGTGAAAAACCAATTATTTGATGTTATCATTAAAAAAGATTCTG
CTGGAGTAAtcagttattcaaaagactgtcaGGTTCTCCCAAAGGACCAT
ATATCATTACATTCCCTTCCCTTAAAGGTCTATCAAGTCATGATTGAAAC
TGAAAAAACTATATTTGATTGAGCTCTATCAAAATCCAATGAACTTAAGC
TGACTTAAATTGTTCAATTAACATTTGGttgaatcaaattttttcctAAT
CATGTTGTCCTCGGTCAATTTACTGtaaggcatgtccaaatttttcaaat
ttaccttAATTTCTTATTACCATTTCCACTTGTCGAATCATATCACTTCG
TACATTGAAAGAAGCAtattggagtgtagatcactaAAATGGCTGTGCca
taattaaatttttcacccaaaaaaatattacgTAAAAaccaaaaactgct
gacgttatcccagtgatctacactccaatacACTTCTTCCAAAATGTATG
AATTGACATGATATGACCAGTGGAAAATGTGATAAAAAATTTGGAAGTGC
CTTAAGTTGCTCTAAAGTCATGtttaataattaaaatactTCAACATAAA
TTGCGGTTGAGAGAATATTTCATGTATGATATGGCCTTTTTGCCCTAAAA
GTAGCACTTTTAGGGTTGACTTTTCAAATCCTGAGAATTTTTGTGTTATA
CGGAATAAAATTTTGCAGGTatgcagaatttaattttgcggatttaaatt
aaattccgcaaaaattgttccacaaaaatttcttcccttaaggtacattA
GGCCTGATtagttcaaaaaaaatttagtgCATAAAAAGagatcaattttt
ttaaacagtttgtgaacatttagagaatttatttttcaatttttactgaT
GATAGTAATCGAAAGACACTGAAACGTCTAAAATATatgtattttaaatt
ttattcaaataaaatgaaaatgcttctgTGCTTGAACTTCACATTGAAAA
TATTCAGGAGGACCAATCAATTTAAGGATACATTAAGCAAGCatgaactt
ttaatttttttacaaattttagccttttgtttcaaaagtaaatgtcttGA
AAATTCATCCTAGGGCTAATTCAATTCTCAAtctaatttgattttgttgg
tGTTAGTAATGGTATAACTTTTTCGGCcaattattattatatattacCTA
TTTTCCTAAATTGCCATTAAAGTCATACAATTACTAACACTAACAAAGTC
TAACTAGATTGAAAATTGAAGTATGGAACATAAAATTGTAATGGAAAGAT
AAATGAATCTTGATATTGACAAAACATGAACTGTTAGAAACGAACAACTG
AGGAAATCTGTGAGTAATTTATGTTTGAGTTGTGCCTTAATAAACTACAG
TAACCTCTGAGTCTTCCAGAAAAATACCTTCAATTGAACAGGCTCTAAAA
GCTTAATTAGCATTTTAAATCATTGCcaacttttctttctttagaTATCA
ACCATGGTGAAAGGAGGCCGTAAAATACGCCCCGACCAAATCGAGCCATA
CACATTGACACCTCCGTCATGTAATGGAAAAGGACCGCCCATGTTTGTAT
CACCCACCAAAAACAATGAGATCATTCATTTTGAATGCACTACTGAGGAA
ATGAAACGACAGTTCGAGCCACCCTGTACAAAAAGTTCAGCCGAGAAGCA
ACAAAAGTGTGGGAAACTTGGAAAGCCTATTCAAATACAAGCCAATCACT
TTCCTTTGGATATCAAGATTCCAAATGGCGATATTTACCATTATGACGTG
ACATTTATCCNCTAGGGCTAATTCAATTCTCAAtctaatttgattttgtt
ggtGTTAGTAATGGTATAACTTTTTCGGCCAATCATTATTATATATTACC
TATTTTCCTAAATTGCCATTAAAGTCATACAATTGGAATTACTAACACTA
ACAAAGTCTAACTAGATTGAAAATTGAAGTAGGGAACATAAAATTGTAAT
GGAAAGATAAATAAATCTTGATATTGACAAAACATGAGCTGTTAGAAACG
AACAACTGAGGAAATCTGTGAGTAATTTATGTTTGAGTTGTGCCTTAATA
AACTAACCTCTGAGTTTCCCAGAAAAATATCTTCAATTGAACAGGCTCTA
AAAGCTTAATTAGCATTTTAAatcattgtcaatttttctttctttagatA
TCAACCATGGTGAAAGGAGGCCGTAAAATACGCCCCGACCAAATCGAGCC
ATACACATTGACACCTCCGTCATGTAATGGAAAAGGACCGCCCATGTTTG
CATCACCCACCAAAAACAATGAGATGATTCATTTTGAATGCACTACTGAG
GAAATGAAACGACAGTTCGAGCCACCCTGTACAAAAAGTTCAGCCGAGAA
GCAACAAAAGTGTGGGAAACTTGGAAAGCCTATTCAAATACAAGCCAATC
ACTTTCCTTTGGATATCAAGATTCCAAATGGCGATATTTACCATTATGAC
GTGACATTTATCCTTCCAAACAAGGCAGAGGTGAAAAAATCACATAAATC
TCTATTGATCAAAGTCATTGAAAAAGTTAAAGAACAATATCAGAGTACTC
TTGGTAATccaaattctattgtttttgacGGACTGAAAAATCTGTATTCG
AATAGAGAATTGTTCCAGGGACTCTTTGAAGGAACTGTGAAAATAAACGA
TGGTAAAGATTCACCCCGCTTTATTGAAGTTGGTGTCAGACTCAAAAGGG
TTGGCAATAGTTTGCCAGTGAACTATATGGTGAGTCAATACCTCCAATCA
GGAAGGAAAGGAGCTGCTATTCATGATTCGTTGCAAGTTTTGAATATCAT
TCTTGGAATGACACCTTTGTTACATTACGAATGTGTTGGACGGACACATT
TCAACCCATGTACAGGAAATGGATCCATCCTGGAGATCGGTCATGGTAAA
TCGATCTGGGTTGGCACCTTTCAATCTGCTCGAATCGGATGGAAACCATT
TCTCAACATTGCCGTCGCCAACCGACCTGCATATAACCAGCAGCCTGTCA
TCCAGTTTTTAATGTCAGTCCTCAGCAGCAAAGATCCCAGATGTCTGTCT
AATCTTCACCCGAAAGATAAAACGAAATTAGATCGTGAAATCAAACAATT
AAAAGTTCGCTTTACCAGACCGGATGGACAGAAAAGGGAATATCGTGTGA
ACAAACTCGTCGACAGTGCAGAACGTTTGTCTCTGGATATCNATAAAACG
AAATTAGATCGTGAAATCAAACAGTTAAAAGTTCGCTTTACCAGACCGGA
TGGACAGAAAAGGGAATATCGTGTGAACAAACTCGTCGACAGTGCAGAAC
GTTTATCTCTGGATATGGATTCGCCAGATGGAGGAAAGCGAAAGACCACA
ATTCAACAgtacttcaaaaatcaatacaAATGCAACTTAAAATATCCTTC
GTTACCATGCGCTCATGTTGGTCCTCCCAAGGGAACAATTTACCTTCCAA
TCGAGTTTTTGGAGATCAAGAAACAACTAGCTCCAACCACCAAAAAGTTA
TCCGAGGACGAAACTGCCGAAATGATCAAACAAACAGCTCTGCAACCCAA
CATCAGAAAACAACGTATCCAAAGAAACTTAAGAGAACTGAAAAACTCTT
TTAAAGATGACCCATACGCTAAAGCCTTCGGTTTAGAGATCAACGACAAA
ATGGCGGAAATGCGTGGACGAGTCTTGGATGCTCCCTCCATCAAGTACAA
GAAAGGTAGCAAAGTCAGCGAGTGTCGACACACGGGTGGTAAATGGAATA
TGACCAGCCAAGATCGAGTCGATCCCTTGAAATTTCTAGAAACCGTATCC
CTCGGCAGATGGGGAGTTTTAGATCTTGCCGGACTTCCACCGCAACAAAA
GCAAGCTTTCGTGGATGCTGTGGCTATTGAAGCAGGACAACGAGGTCATC
ACATCGACTATCCGATCTACGATAAAGCTGACGTTAACAACCTCGAAGAT
GTCGAGAAAAGTTTCAAACGGCTTTGCATGCATATTCAACAACAGTGCAA
CGGAAAACCCCAGCTTGTCCTTGTCATTGCCCCCTTCAAAGGAAACATCT
ATCCATGCATCAAATACATCGGTGACGCAGTAATGAACGTTCCAACGCAA
TTCGTCCTCAAGAAAAACGTCCTCGGTAAGCCAAGACAAGGACCCAGCGG
TCAAACCATCCACAACTTGTGTTTGAAGTTGAACGCAAAAACAGGTGGTA
CCAATCACGGTTTGTTCGTTCGACCTCCAGTGATGAAGAAACCGATCATT
ATCCTAGGTGCTGACGTCACTCATTCGGCGCCCAGCGAGTTCAAGAAGCC
TTCCATTGCAGCTATGGTGGGATCGTGCAACCCCGAAGCATCAGAATATT
TCTGTGAAGTTCGCGTTCAAAAACAAGGCAAGGTAATGGAGGAGATCGAA
AAGACAGAGGAGATGGTCAAAAGTCTCCTTCAACGATTCAACGAGAAGAC
GCGCGTCAAACCGTTGAAGATCATCTACTATCGAGACGGTGTCAGTGAAG
GACAGTTCATTTCAGTATTGAATCACGAATTGACAGCCATTCGAAAAGCA
TGCCTCAGTCTTCATCCTGACTACAAACCTGAAGTCACCTTCTTTGTCGC
ACAGAAACGTCACAACACACGATTGTTTCCTTCAGATCCCAAAGATGGCT
TCGGTAAAGCGAGGAACGTACCTCCTGGAACAGTCATCGATACTATGATC
ACTCATCCCACCGAAACTGACTTCTTCTTGGCATCCCATGAGGGAATCCA
GGTAGGTCATTCTTTGTTAATTTTATAGCTAGTGAGCACTGTGTACTCTA
TTCATCTATTGACTTGCACAAGGTTTTCTTGTCACTCAAAAGTCTTTCAG
TTACCAAAAATTGAGGAAGTTTTTCACAGATagacattttctttttcttt
ttttatgaatgAATGGTTTGTTGTATGGATGTTCAATGTTATCTTTTTCA
GGGTACCACCAAACCAACGCACTACCATTTGCTTTGGGACGATAGCAACT
TCTCCAATGACGAACTTCAAAGTCTGACCTACAATCTATGTCATCTTTGC
TCTCGCTGTGAACGAAGCGTTAGTTACCCAGCACCAACGTACTATGCGCA
TTTGGCAGCCGCCCGTGCTCGTGAACATCACAATGCTCTGTTGCTTCGTA
ACCGAAATCGTATTGATTTTATTCCAAAGGAGGACTTGAGAAAAATCGAA
AAGTGTactttattaaattattttatgtaaaaatctaattagaaagccaa
ttttattttatcttaatttttttaatcaatttcacGAGCTTGACTATCTC
AATCATTAAATAAGGGAGCAGCCTCGTCCGTTTTCAGTCCCCAAAATTTG
CGGAGCATGATCATTTTGAACCGACATTTTATGGAATCGAGTTGAGTTTT
TTGATGAGATTCAgtttcttttaattttattttattagaaaagtattatt
ttattcttaaacatttttattttcagtaaaATTAATTGTAAGTGTTTCAA
GGCCGGTCCTTTCAATCGCTACTCAGTGGGAAACGGCACATATTTTTAGT
GCAGTCATTGCAAATCATAATTCATTCATTAGTCATCAACTTTTACAGTG
ATTTTGGAATTTCCCTCTGTCCAAATTATTTGCAGACGTCAACTGAAAAG
CCCACTCATATTAGTCTCTTTGTAATTATCAAATTTTatattcaaaaatg
aaaaataaggtATTTAATTATTGTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070826-exon-scaffold_58-1491911889:741444..741496 | TCONS_00070826-exon-scaffold_58-1491911889:741444..741496 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1510915933:741444..741496 | TCONS_00070826-exon-scaffold_58-1510915933:741444..741496 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1575043694:741444..741496 | TCONS_00070826-exon-scaffold_58-1575043694:741444..741496 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1491911889:746691..749294 | TCONS_00070826-exon-scaffold_58-1491911889:746691..749294 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1510915933:746691..749294 | TCONS_00070826-exon-scaffold_58-1510915933:746691..749294 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1575043694:746691..749294 | TCONS_00070826-exon-scaffold_58-1575043694:746691..749294 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1491911889:749495..750271 | TCONS_00070826-exon-scaffold_58-1491911889:749495..750271 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1510915933:749495..750271 | TCONS_00070826-exon-scaffold_58-1510915933:749495..750271 | Clytia hemisphaerica | exon |
| TCONS_00070826-exon-scaffold_58-1575043694:749495..750271 | TCONS_00070826-exon-scaffold_58-1575043694:749495..750271 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:741444..750271 + |
Blast
BLAST of TCONS_00070826 vs. Swiss-Prot (Human)
Match: AGO2 (Protein argonaute-2 OS=Homo sapiens GN=AGO2 PE=1 SV=3) HSP 1 Score: 490.345 bits (1261), Expect = 7.546e-156 Identity = 315/853 (36.93%), Postives = 450/853 (52.75%), Query Frame = 3
Query: 270 GKLGKPIQIQANHFPLDIKIPNGDIYHYDVTFILPNKAEVKKSHKSLLIKVIEKVKEQYQSTLGNPNSIVFDGLKNLYSNRELFQGLFEGTVKIN---DGKDSPRFIEVGVRLKRVGNSLPVNYMVSQYLQSGRKGAAIHDSLQVLNIILGMTPLLHYECVGRTHFNPCTGNGSILEIGHGKSIWVGTFQSARIG-WKPFLNIAVANRPAYNQQPVIQFLMSVLSSKDPRCLSNLHPKDKTKLDREIKQLKVRFTRPDGQKREYRVNKLVDSAERLSLDIXKTKLDREIKQLKVRFTRPDGQKREYRV-NKLVDSAERLSLDMDSPDGGKRKTTIQQYFKNQYKCNLKYPSLPCAHVGPPKGTIYLPIEFLEIKKQLAPTTKKLSEDETAEMIKQTALQPNIRKQRIQRNLRELKNSFKDDPYAKAFGLEINDKMAEMRGRVLDAPSIKYKKGSKVSECRHTGGKWNMTSQDRVDPLKFLETVSLGRWGVLDLAGLPPQQKQAFVDAVAIEAGQRGHHID--YPIYDKADVNNLEDVEKSFKRLCMHIQQQCNGKPQLVLVIAPFKGNIYPCIKYIGDAVMNVPTQFVLKKNVLGKPRQGPSGQTIHNLCLKLNAKTGGTNHGLFV--RPPVMKKPIIILGADVTHSAPSEFKKPSIAAMVGSCNPEASEYFCEVRVQKQGKVMEEIEKTEEMVKSLLQRFNEKTRVKPLKIIYYRDGVSEGQFISVLNHELTAIRKACLSLHPDYKPEVTFFVAQKRHNTRLFPSDPKDGFGKARNVPPGTVIDTMITHPTETDFFLASHEGIQGTTKPTHYHLLWDDSNFSNDELQSLTYNLCHLCSRCERSVSYPAPTYY 2801
G G+ I++QAN F +DI P DIYHY++ I P K + + + ++E + + +++ + VFDG KNLY+ L G + +++ +GKD R +V ++ V+ SGR + +++Q L++++ P + Y VGR+ F G + L G G+ +W G QS R WK LNI V+ Y QPVI+F+ VL K ++ ++ D + K +EIK LKV T KR+YRV N A + + G + T+ QYFK+++K L+YP LPC VG + YLP+E I KKL++++T+ MI+ TA R++ I + +R SF DPY + FG+ + D+M ++ GRVL PSI Y G + G W+M ++ +F + + W + A PQ++ V + R D PI + S + + H++ G QLV+VI P K +Y +K +GD V+ + TQ V KNV Q + QT+ NLCLK+N K GG N+ L RPPV ++P+I LGADVTH + KKPSIAA+VGS + + Y VRVQ+ + E I+ MV+ LL +F + TR KP +II+YRDGVSEGQF VL+HEL AIR+AC+ L DY+P +TF V QKRH+TRLF +D + GK+ N+P GT +DT ITHPTE DF+L SH GIQGT++P+HYH+LWDD+ FS+DELQ LTY LCH RC RSVS PAP YY
Sbjct: 32 GTSGRTIKLQANFFEMDI--PKIDIYHYELD-IKPEKCPRRVNRE-----IVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD--RIFKVSIKWVSC-----VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPL--GGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKS-----------------------------------------IEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQEQKHTYLPLEVCNIVAG-QRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRS--ASFNTDPYVREFGIMVKDEMTDVTGRVLQPPSILYG-GRNKAIATPVQGVWDMRNK------QFHTGIEIKVWAI---ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGL-QLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNV-----QRTTPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPNRYCATVRVQQHRQ--EIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYY 805
The following BLAST results are available for this feature:
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