XLOC_043634 (gene) - C. hemisphaerica

Overview
NameXLOC_043634
Unique NameXLOC_043634
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_513:365382..371459+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043634 ID=XLOC_043634|Name=XLOC_043634|organism=Clytia hemisphaerica|type=gene|length=6078bp|location=Sequence derived from alignment at scaffold_513:365382..371459+ (Clytia hemisphaerica)
taagaatatcagggtgagatttcgggtttaaaacaataggcctattgttt agaacaatagaaaaataagaataatgctcaccctcaaacaaagtacacta ttcttataaaaaaaaaagcgtgtaaacaGTTAAATAAAGGAAAGTCACCT TGCCAACGTTATTTGTAATTTGAGGTTTATAAATgagatttcaaaaatgc aaACACAGCGggtaaaaccaaacctacaaaTACGGGGGTTAGATAAAATG CTCGATCAAAGAATAATATCATTAAAATACTGTATTGCTGCAAAGAATCC TTTTCAGTTCTGACCCCCGTGAACATTTAAGGTACTTTAAAAGCCACGTC TAGAACACTAGAAAGAACGTTTTTTATGTTTTAGTCGAAACTTTTGTTCG CATGCAAGAGAGAAGAGAGAGAGTGGAAAAAAAGGAGACGGCGGCATAGA GACTATTTTGTATAATTATACAAAACATTAGAATAGCTTTTCATTAATAT GAGTTCAAATAAGCAAGATATACTACAAGGAGAGCGTTGTACTACACTAG GTGCGTGCGCAGTGGATAACACTAAATGTTCAATATGCCTAGCACAAATT GACCGAGGTTCAAAGTCCAATAAATGTTCACACTGTATCAAAAAGATGAA TTCGATACCGACTGGTTTTCAATTCGAAACTGACGGAGAAGAGAAGAAGG AATTTGAATGCCCGATTTGTTTGGGTAAGTAGAAAGTTGAACATTATTTA AGAGAATATTCGATATTGTGTACAGTGAATTCATTAACTCATACATATAT CTAGTTTAAAGTAGAGATCGAATCGCGGGCTCCCTTTTTGCGATCAGTTT GCTAACCTTTCCAAAAGGTGTGAGTCACTTCTTTCGTTTGAAAAACTTAG CTCCTGAATCGTTATTAACAAACGATTTCTCACTGAATAATATCATcctg tacacatttttttataagcaacttcaATTTCAGGGTCTGGGCTGGGGTTG CAAAGCATTCTAtcttattttctgaaaaaatatcGATGCATAGGTTCAAA GGCTTCTATTTTACGAGAGGCTCAagccttagcaacctggttgcttataa aaaatgtgtttgGTATGAAAGTTTGAGTATGCAACTTACTTTAACTTGTT TTCTTCACTCAAACAAGTACATTAATTAGTCAGATAAGCAAGAGTGAGGT TGAGCCAATAACCTTACAAACAGAAAGCAACCACTAATCTTGACATCCAA cgaattttatcattttattcaGGTATCATAAGAGATGCAACCGAACTACC ATGTCACCATTTGATGTGTTTGGCCTGTCTTGAACATTACGAAAAcgaag aaaaagagaaagtcAAAGGAAATGGAGAAGACGAGAAGACAGCGGTGTAT TTATGCAGTATTTGTCAGAAACCATATCAGCCGAAAGATGTAAgacatca aaaaaagattttttaaatcacaCTTTTaatataagaatggtgtaacaAAA ATTCTAGGGCTCAGTTGCCAAATTCTATGATCGTGGTTTTCTTAAGTAAC TTTTTGGCTGAGTTTCTAAaggaatattcatgatattcctTTAGAGTaca ttcttataagaaaaattgtgtaattcgtgttcttataaaatgcgTGTATC ATTTGATCAcaatatttcagaaaataacTCGGCAAAAGTCATCAAGTTAT ACTCTATTAATCTTGATCTAGAAATATCAAGTCAAGTCCATTGACAGGAT TATTCAGACATCGATTCGTGTGAAATGCCATCAGAAACAATGCACCTGGG TTGGATGTATCATGGACTACCAggtgagaaatttcaaattcgagAAGCTC AATTCAAGattcaaatttacaattttactGATAActaaaaagaatatatt tttttctccaaatgaACCACCCGACTTGACAATCAAGTCAATTAAACGCA ATTggatttttccagaaaaaaaaccgtgcaccccctgttgaggagtccat ttccattccaagggggtatggtttgaaatgcagtggaattccagagcagt agacaaaaatccgtcaaaaatcaGTGGATTTCCATGTGtgtaatgattga aaatctgtaaaaattcggaattctaGAGGGgaatgatcctaaaattgcct ggaattccaagggaNAAGTGGATTTCCATGGGtgtaatgattgaaaatct gtaaaaattcggaattccagaggggaaTGATCCTAaatttgcctggaatt ccaaggggctAGTTCAAAAAAGGTTGgagctcctcaacagggggtgtacg gtttttttctggaaaagcccattagtagataggctgctggcatccactaa cggattcgtgctccttatagaggatgcttaataagctatatttcctttgt ccagagatttgccgcctttagccgatatacggctaaagacattgtTAGCT GGTGAGTGTGAGTGAAAATTTtatgtgaggcaccaaatcatagattggaa aatatatttggatttagaaaaaaaagtaggcggaaggaagtttgcttgtt tttcttcctcctttcttgttcaatgtggagattttgtaaaagatgagaag ttagatttattgaatttatgtaccctgatgtatcttctgtgtgcaccaac aaaattttgcttcataaaactacattttgatgcttgaatttggacttgta tggagtgtataatttttttaccacactggattcgttgataaCTTttgctc cagataattgttttgtcagttctacagatatgttgcagattatttcaagg tattctagttatgtatatacagtacatttttggGGTCATactgaatattt ctgacattagttctttatgattctacaaaagggagtgttgttgttccttc aacaaggagctttaaatattaaaacaaacaaagaacttttcttcagcttt ggcatttcactttttaatactgtgtgcctttgtatcttttcaggtactta gcttcaattctttgaagagattggagtgtttctggttgttttctttcact tttgtgttcatatttgtatttttttgagcttcgaccgaagagctgatgga aaagttttgataaatttacagaccagatatcgtATAAAAGCAAACGtcga aaataaatctacagactgtacataatgcgcccataaaattgttttttatc ttttttctgttttgttttttctggtctgggattcgaattttgaatgcaaa cattccattgaaaacgtttgaaacgatcgtttttgcgtacacatcaatgt caatcaaattattaactcgcAAAGATctcctttgcgaaccggaaagcggt tggtagatcattaagcagacctatactaccaggggttttgtagaggtctg cgattcagactaattaGTAGACGGAATTAAAGACtgaaatttcttccctt ttaaaagttttcatttttccttcttttacaGCAACATGACAAGATTTGCA ACTGTGTATTGGAACCTTGTCCCTACTTCGAACTTGGATGCGACGTCATG GTAAGAAGTTCTTTTTCCAAGTCAAAGATTCGAATTCTAACAGAGCTTTC AAGACGTTCtctacaataaaaacaaggatctttatacacgtttttttttt aaacatccaaaatttttgaagccttcggattttcagttttaagcctaaaa atgttctttacatgttcttatttttataattttgtgaCCATTCTtacttt cctaagaaattgcgTGTTTTCGAGtccttaaagccttaaaatgttcttaa caatttTGCCATCGAgcccttatgttcttattttttagtttgttcttata aaaaaaacgtgtactaaacctttttcttaaatttcactggctgttctaat aaaaatgttttagtgAAGAAGAATATCAGAAAATATCCTTTTTTTAAGCA TTTGGGCCTGTTCCTACAGGAAAAAATAATCTACACTATATTTGAAATTG CTTGTGCTAACATTCTTCTTTTTAGATCGAGAGAGGGCAGATACAAACAC ACAGCCGATCCAATAGTATCATCCACGAAACACTGTTACTGAAAAGCGTC AAAATGTTTTCACAAGAACGAAAACAATATCAACAACAAATCAAtgatca aaacaagaaaatcgaGAGTTTAGAAGCGACTGTGACAACACTGAAAAAAC ATgttgaaaaaatcgaaaaagacaccgcgcaaaatattttgacaacAAAA AGTGAGGCAGCAAAGGCTCAGAAAATGCGAGAAAACATTGTAAACATTGA AAAGGATTTCGACCAGCGAAAAGCCGAAGTACAGAATTTGAAAGTTCACG CAGAGCAACTAAGTGAATTACATTTAACATTAAGCCTGCCAGatataaga aatcaaaggtcTGTCAGTAAATTTCTACACAAGAAGGATTACGACACCAT GAAAGAAGTTAAGAGCTGGAACGCCTTCGTGAAAATAGCAAATCGAAACA AAAATTGTAGCTATTTGAACACTTTAAAGGATGCAATTAACAATTATAGC GAGACAGTATTTAGCAAAAAATGGCACACCAGACTTTCACAAAAAACCCG TTCCCAAACAGAAGGTTGTATGGTATACGGATATCTCAAATTAAGAACGT ACATCCAAATTGAAAAGATCAGCGTAAAAAAATGCAATGATCGAAAAGAA TTTCAGGAGGCAACTCGAGATGAGAAATGGTGCAGACATTCAGCCTTCAC GGCAAGCTTTGTAGACTTTCCTAATGAAGCTTTACACGTAATGATACAGT TTGATTTCAAAACAGTTTCTCTTTTCCATTGggaagatgaagaaaaaaac agaacAATTCCATTAAACGGAGTACCCGTAATCTTGGGTGATAGAAAATT TAGTCTCCATGCAGGAGTCTTGCTCCGTTTTAATTGAAAATCTCAGCTAG AAAATCATATGAATATCTTAAATTTGGCGAATAATTTATTTTGACGAGGc ggcaattaatttcaacttaGGCGAGAACCAATCATGGCGAATCtggcaaa ttttgccaaaataggCAACTTTACCGGGCTATATCTCCGGAACTAAGAGG TTTCAAGAATTCTCggaaagaaaataaagtttttaggaaAATAGGTTGGT TTTGAGGCGCCCCTTAACCGACGCAAGACGTCGTTGCaagacttttgaat ttttctttttcaaaaagtgcaaagcCTTGGGATTGATAGGGTTAattaaa aatttcgcaatttcagaaatattttcCTAAAACCTTCCTTTTTCGTAAAG TCAGAGGACCTCGAATGTCACACATTCAACTTGGAAAATCAAGGAAGAAT ATCATTTTAGCAAGAAATTTTCCCCATACCTTCTTTGTCCACGTTTGTTT TGAGTGTTCTTCCGAACTTCTTCCGAATGcgtgatatttttcaaatatgg TAGAGTGAGCAGTGCGTGATTGTCAGGGTCTAATAGAGTGCACGTTGGAA GACGGTCCTCAACACGTGAGTATAAATCGTGATATCTCTCCGACCTGACA TGAGAAAAAATGATTGGTTTAATTTAACTGATATGTCGATAGAAAACTGT TCAATTTTGTAAGTAATGTTTTAAttgaatggaattttttttttcgtatt ttagaatttctttactttgaatgtcaaatatattacacgctttttttata agaatggtttaaatccatttcatcatggatatttttaactttttttggga aaatcatcctaaaatattcttacagcatttttaggttaggatcctaattc agactagatttaacatttagtacatacgtctcaagcataaaattatattt tgtgaaaggagtaagccttacttggggggtaattgacaatttataattaa aaatgctctaaaaatggcattcttagcttgagtagcaaaatccCATGATG acgtgatattcttagcattattcttaattctttggccattttcatcatgt tcatggacattcttataaagtgtattcttataaaaaaaagcgtgtactga ttagaaaactttttgatttgaaacttTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070078TCONS_00070078Clytia hemisphaericatranscript
TCONS_00070079TCONS_00070079Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070078-proteinTCONS_00070078-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:365382..371459 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26 0.28 0.65 0.57 0.19 0.14 2.32 2.51 1.89 1.72 4.5 2.31 10.12 7.38 5.59 9.96 7.39 6.32 7.03 6.97 8.22 9.85 2.56 3.39 7.21 8.22 8.78 6.86 2.41 1.49