XLOC_043542 (gene) - C. hemisphaerica

Overview
NameXLOC_043542
Unique NameXLOC_043542
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:80935..84290-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043542 ID=XLOC_043542|Name=XLOC_043542|organism=Clytia hemisphaerica|type=gene|length=3356bp|location=Sequence derived from alignment at scaffold_511:80935..84290- (Clytia hemisphaerica)
GAAATCGATACCATGAGGTGAACGAAAAATGATACATTATAATATAAAAC
TGAAGGCGCCTTTACAACAACACTTACGCAGTTACATTAGCAAGACTTAA
CTTTACTTTATGATAGTTCTTCAAAAGATTAGACAGAAAAAAACATTGCT
CATTTCTATTGGATGAAAGGTAAGACACCCGGGGGGGGGGCAGCCAAGCA
AAATGACTGACGGGTATGTGCGGGCACTAAGGGTGTGTTTTTCAAGGCAT
CCGAAATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCC
CCGGGGTAAGACAGAAGAAACCGATAGAGAAATAATATATACTGAAGTTA
AGATGGAAACAAACTGTGACTGGCGAAAAATTTTGAAACCTTTGAAATAA
AGCAAAACATGATCTACAAACAAATAAGCCTATTGGATAATAAAATCACC
GTATTAGTAAAAGAGGCTCAAAACCTGTGAGCAGAGCTGTCGGAAATGGA
ACGGGTAAGGACTCTACCAGATTGTACCAATTAAACTTCGCCATCATTAG
TAGAATTGGCAGAATCAAACTATCATTCTTCCATTTCATTTCCATTAGGA
GGTGATGTATTTTGATGAAGACGAAGATGAGGAAGTTCAAGAGCTCTTCT
TAGGTAAATTAAAGAAGTATTAAGATTAGTTTTGTGTATATATACGGGAA
TATCCCAACTCGAGTCCAGTTCCTTTTTTTATGATTATGATATTGTTCAC
AATTGGTCAGTAAAATCATAATGTGGTACAAGTGGCTCTAGGTACAGCAT
TTGACATAGGTACATGATTTGAAGCATAAATCATGTTTAGAAAGAACACG
AGAGAATTGTCAACTATCATCGTCCAAAAGAAAAACTACAATTATTTCTA
TTTTCTTTGTTGAAGTAAGATTCGGGACATAAAGAAAGACACAAAATACG
ACGAAAGTAAGAAAGCCAAATTTCTTTCTTAAAAAATCGGATGATTTCTA
CTTTTCAGGTTCATATGAAGGGACACGAAATGATCGTGAAGAAAGACATG
GTCGAGGGAAGGCTATTTTGCCGAACGGGGATGTTTATGAAGGAGAGTAT
GAAAATGGAAAGAGACATGGTTATGGTGTTTACACGTAAGATGGAGAACG
GATAGAATTGATAAAGGTTTTATGTTTTTGAAGTGACATGACATCGTCTA
CAATTACTTTTGAGATCGTCGCCAGAAAAAAAGACCGTTCAGTTTGTAAA
TCATATATTGCTAGGGATTAAATTTCATGACCTTATAATCTTTAAACGAT
GCAACTTTTAAGCATTCATATTCATCCATAGGTTTGTTTCTGGTGCAAAG
TATTTAGGTCACTATGTGCATGGTCGAAAAGATGGAAGTGGAAAACTTCA
CAATGAAGATGGATCCTTTTATGATGGAAATTGGACAAATGGTATGAAGT
GTGGAAAGGGTGTCAATTGTTACAGTAATGGAGATCGTTATCAAGGAGAT
TGGTTTCATAACAAAAGACACGGGCATGGAAAATATGAGTTTAAAAAGAC
AGGTACAAATTTGCTTTAAAAAAGCTAACAAGTTTATTTTTCACCTCCCC
GAGTAAAAGATTTTCAACTTTACATAAAAATCATATTGTCATAGCGACAA
TGAAACAAACCTTCTAAAAATTAAATGTAAAATAAACTTCTTAACTTATG
AATTTTGAAATATTCAGGGGTGTCTGAAAGCTTAGGTAAAGTCAATAAAA
AATGTCCAAAACTTAAACAACTGATGACAACTTTTTATCTCTCCAAAAAC
AGGGAGCGTATACGATGGGCGCTGGGTGGATGGTCATTGGCATGGAATAG
GTGAACTTATTCACCAAAATCATCGATACGTCGGAACCTTTGATCAAGGT
CTCCCTACTGGTAAAGGAAAGTAAGTATTCAAGTCACACTCAATGGGAAT
ATAAATTTGTTCAATCTATTATGGAAGTTAGAGAATCGTTTATAAGAGTT
AAACAAATGCCTTAAAAAGCCCAAAGCTTGTTCGAGTGGAGAAAACATTC
AGGTTTTAGAGACTTTGCTGTATTTTTAAAACCGTGACTACACTTAAACA
CGAAATTTATTAGATGATTAGATAGTCCGAAAAAATATTCAAATTCTGAT
ATAAATCTTGCATATGAGCTCCACATTTTGAGAATTGGAAATTAAAGTAA
ATTACATAATGAATTCCATTTTTATAGAAATTTAGATTTAATGCATAAGT
CTTGTCTAGTAACAAAGATATAAAGAATAACAAATAGCTGAAATGTATTA
TTAAGAATATATAGCGTCCATGTTTTAAGTCCCTAAAATGTGGAGAAAAA
AAATTCTAATACAAATTAAATTACAACTACAAAAACTTTAACTTAATTTA
AAAAGTCTCAATAAGTAGAAAAGACCTAATTGGACAAAGTAGCAAACAAT
TTGTTAACTTTATGTATCACGAAACCACCCGGTAAAACCACTTAAAAGGC
ACTAAAACCAATTCTATTTTCACATTATAGGTATATTTTCAACAGTGGTA
TCGCTCAACATGGATATTTTGAAATATTGAAAAAACCTCGTATAGATGTC
ATCAAAAATTTGAATATTGAAAACAAAACTGACGAAGGAAACTGGGAACG
ACAAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069951TCONS_00069951Clytia hemisphaericatranscript
TCONS_00069950TCONS_00069950Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069950-proteinTCONS_00069950-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:80935..84290 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.77	1.98	1.29	1.79	0.72	0.06	0.69	0.86	0.66	1.24	0.3	1.78	2.66	2.86	3.1	1.68	9.92	9.61	3.74	0.95	30.72	30.79	5.88	8.34	9.98	7.95	4.26	3.33	3.37	3.52